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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 07:41:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

uncultured Shewanella sp. isolate ae0cf98b-7678-43db-a020-567e09f3cda9 genome assembly, chromosome: 1.
OY781435.1:1795188-1795207
TAGCCTCAAGTGAATAATTCATTAGCCACT1795188GATTTTCGAGTCTTTGTTGGCGCAATAGTCCAATAAGGTATTTAGTCGAT
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:20294255-20294274
TGATTACTTATCCAAGTATCTGCCTATAAG20294255GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATTAGCCTTCTCGAGGA
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:20305592-20305611
TAATTACTTATCCAAGTCTCGGTTGACAAG20305592GATTTTCGAGTCTTTGTTGGTAAAGGTCATCTCATTAGCCTTCTCGACGA
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141916.1:1257822-1257841
TGGTTATTTATCCAAGTCTCAGTCGACAAG1257822GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATCAGCCTTCTCGGCGA
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141916.1:36286175-36286194
TGATTACCTATCCAAGTTTTGGCTGATAAG36286175GATTTTCGAGTCTTTGTTGGTAGAGGTTGTAGAGCCAAAAATAATCACAA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:41011876-41011895
TGATTACCTATCCATGTCTCAGCCGACAAG41011876GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATTAGCCTTTTCGGCGA
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:22497076-22497095
TAATTACCTATCCAAGTCTCGGTCGACAAG22497076GATTTTCGAGTCTTTGTTGGTAAAGGTCATCTCATTAGCCTTCTCGACGA
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141933.1:35009288-35009307
TGATTACCTATCCAAGTTTTGGCTGATAAG35009288GATTTTCGAGTCTTTGTTGGTAGAGGTTGTAGAGCCAAAAATAATCACAA
Malus hybrid cultivar cultivar Flame chromosome 9.
CP141935.1:22499468-22499487
TGATTACCTATCCAAGTCTCGACCGACAAG22499468GATTTTCGAGTCTTTGTTGGTAGATGTTATATCATTAGCCTTCTCGGCGA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:5927644-5927663
TGGTTATTTATCCAAGTCTCGATCGACAAG5927644GATTTTCGAGTCTTTGTTGGCAGAGGTCATTTCATCAGCCTTCTCAGCAA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:44644518-44644537
TGATTACCTATCCAAGTCTCGGCCGACAAG44644518GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATTAGCCTTTTCGGCGA
Malus hybrid cultivar cultivar Royalty chromosome 14.
CP141966.1:25339359-25339378
TGATTACCTATCCAACACTCGACCGACAAG25339359GATTTTCGAGTCTTTGTTGGTAGAAGTCATCTCATTAGCCTTCTCGGCAA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:40650790-40650809
TGATTACCTATCCAAGTCTCGGCCGACAAG40650790GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATTAGCCTTTTCGGCGA
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141968.1:26848454-26848473
TGATTATCTATCCAAGTCTCGGTTGACAAG26848454GATTTTCGAGTCTTTGTTGGTAGAGGTTATATCATCAGGCTTCTCGGCTA
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141975.1:22814206-22814225
TGATTACCTATCCAAGTCTCGACCGACAAG22814206GATTTTCGAGTCTTTGTTGGTAGATGTTATATCATTAGCCTTCTCGGCGA
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141981.1:19322709-19322728
TGATTATCTATCAAAGTCTCGATCGACAAG19322709GATTTTCGAGTCTTTGTTGGTAGAGGCCATCTCATTATCCTTCTCGGCTA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:5237739-5237758
TGGTTATTTATCCAAGTCTCGGACGACAAG5237739GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTCATCAGCCTTCTCAGCAA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:41642974-41642993
TGATTACCTATCCAAGTCTCGGCCGACAAG41642974GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATTAGCCTTTTCGGCGA
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:2917799-2917818
TAATTTCCTATCCAAGTCTTGGCCGACAAG2917799GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTTATTAGCCTTCTTGACGA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:21190061-21190080
TGGTTATTTATCCAGGTCTCGATCAACAAG21190061GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATCAGCCTTCTCGACAA
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:30737376-30737395
TGGTTATTTATCCAAGTCTCGGTCAACAAG30737376GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATCAACATTCTCGGCGA
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:2168833-2168852
TGATTACCTATCCAAGTCTCGGCCGACAAG2168833GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATTAGCCTTCTCGACGA
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143387.1:28065727-28065746
TGGTTATTTATCCAAGTCTCGGTCAGCAAG28065727GATTTTCGAGTCTTTGTTGGAAGAGGTCATCTCATCAGCCTTCTCGGCGA
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:25977912-25977931
TGGTTATTTATCCAAGTCTTGGTCAGCAAG25977912GATTTTCGAGTCTTTGTTGGAAGAGGTTATCTCATTAGCCTTCTTGACGA
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:2333348-2333367
TAATTTCCTATCCAAGTCTTGGCCGACAAG2333348GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTTATTAGCCTTCTTGACGA
Malus sylvestris genome assembly, chromosome: 16.
OU696518.1:26082773-26082792
TGATTATCTATCCAAGTCTCGGTTGACAAG26082773GATTTTCGAGTCTTTGTTGGTAGAGGTTATATCATCAGGCTTCTCGGCTA
Malus domestica genome assembly, chromosome: 2.
OU696678.1:25872652-25872671
TGGTTATTTATCCAAGTCTTGGTCAGCAAG25872652GATTTTCGAGTCTTTGTTGGAAGAGGTTATCTCATTAGCCTTCTTGACGA
Malus domestica genome assembly, chromosome: 5.
OU696681.1:2711337-2711356
TAATTTCCTATCCAAGTCTTGGCCGACAAG2711337GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTTATTAGCCTTCTTGACGA
Malus domestica genome assembly, chromosome: 10.
OU696686.1:20809490-20809509
TGGTTATTTATCCAGGTCTCGATCAACAAG20809490GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATCAGCCTTCTCGACAA
Malus domestica genome assembly, chromosome: 11.
OU696687.1:33149471-33149490
TGTTTATTTATCCAAGTCTAAGTCAGTAAG33149471GATTTTCGAGTCTTTGTTGGAAGAGGTCATCCCATTAGCCTTCTCGACGA
Malus domestica genome assembly, chromosome: 5.
OU744546.1:2385455-2385474
TGATTTCCTATCCAAGTCTCGGCCGACAAG2385455GATTTTCGAGTCTTTGTTGGTACAGGTCATCTTATTAGCCTTCTTGACGA
Malus domestica genome assembly, chromosome: 12.
OU744553.1:18994537-18994556
TGATTACCTATCAAAGTCTCGATCGACAAG18994537GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATTATCCTTCTCGGCTA
Malus domestica genome assembly, chromosome: 16.
OU744557.1:26689444-26689463
TGATTATCTATCCAAGTCTCGGTTGACAAG26689444GATTTTCGAGTCTTTGTTGGTAGAGGTTATATCATCAGGCTTCTCGGCTA
Malus domestica genome assembly, chromosome: 5.
OU744957.1:2287913-2287932
TGATTTCCTATCCAAGTCTCGGCCGACAAG2287913GATTTTCGAGTCTTTGTTGGTACAGGTCATCTTATTAGCCTTCTTGACGA
Malus domestica genome assembly, chromosome: 16.
OU744968.1:26486649-26486668
TGATTATCTATCCAAGTCTCGGTTGACAAG26486649GATTTTCGAGTCTTTGTTGGTAGAGGTTATATCATCAGGCTTCTCGGCTA
Malus domestica genome assembly, chromosome: 5.
OU744995.1:2347691-2347710
TGATTTCCTATCCAAGTCTCGGCCGACAAG2347691GATTTTCGAGTCTTTGTTGGTACAGGTCATCTTATTAGCCTTCTTGACGA
Malus domestica genome assembly, chromosome: 11.
OU745001.1:33748739-33748758
TGTTTATTTATCCAAGTCTAAGTCAGTAAG33748739GATTTTCGAGTCTTTGTTGGAAGAGGTCATCCCATTAGCCTTCTCGACGA
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:40568403-40568422
TGATTACCTATCCATGTCTCAGCCGACAAG40568403GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATTAGCCTTTTCGGCGA
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:21212047-21212066
TGATTACTTATCCAAGTATCTGCCTATAAG21212047GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATTAGCCTTCTCGAGGA
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:21226388-21226407
TAATTACCTATCCAAGTCTCGGTCGAAAAG21226388GATTTTCGAGTCTTTGTTGGTAAAGGTCATCTCATTAGCCTTCTCGACGA
Malus x robusta genome assembly, chromosome: 10.
OY720334.1:33320777-33320796
TGATTACCTATCTAAGTTTTGGTTGATAAG33320777GATTTTCGAGTCTTTGTTGGTAGAGGTTGTAGAGCCAAAAATAATCACAA
Crataegus laevigata genome assembly, chromosome: 1.
OY756938.1:5259443-5259462
TGGTTATTTATCCAAGCCTCGATCAACAAG5259443GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTTATCAGCCTAGGCAAAGT
Crataegus laevigata genome assembly, chromosome: 1.
OY756938.1:31080894-31080913
TAGCTATCTATCTAAGTCTAGGTCAACAAG31080894GATTTTCGAGTCTTTGTTGGTAGAGGTCATTTCATCAGCCTTGTTGGCGA
Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:22905834-22905853
TGGTTATTTATCCAAGTCTCAGTTGACAAG22905834GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATCAGTCTTCTCAGCAA
Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:26344842-26344861
TGGTTATTTATCCAAGTCTCGGTCAGTAAA26344842GATTTTCGAGTCTTTGTTGGTATAGGTCATCTCATCAGGTTTCTCGGCGA
Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:39646014-39646033
TGGTTATTTATCCAAGTCTCGGTAAGCAAG39646014GATTTTCGAGTCTTTGTTGGCAAAGGTCATCTCATCAACCTTCTCGGCGA
Crataegus laevigata genome assembly, chromosome: 3.
OY756940.1:2133455-2133474
TAGTTATTTATCCAAGTCCCGGTCAGCTAA2133455GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTCATCAGCCTTCTCAGCGA
Crataegus laevigata genome assembly, chromosome: 3.
OY756940.1:9102243-9102262
CGATTATTTATCCAAGTCTTGGTTAGCAAG9102243GATTTTCGAGTCTTTGTTGGCAAAAGTCATCTCATTAGCCTTCTCGACGA
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:20721960-20721979
TGGTTATTTATCCAAATCTCGGTCAGCAAG20721960GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTCAGCGAAGTAGGGTGTTA
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:20739019-20739038
TGGTTATTTATCCAAGTGTCAGTCAGCAAG20739019GATTTTCGAGTCTTTGTTGGCAGAGGCCATCTCATCAGCCTTCTCAGTGA
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:29592082-29592101
CGATTATTTATCCAAGTATCGGTCAACAAG29592082GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATCAAGCCTTCTCATGC
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:34290646-34290665
TGATTATTTATCCAAGTCTCGGTCAGCAAG34290646GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTTATCAGCCTTCTCGGCGA
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:794821-794840
TGGTTATCTATCTAGGTCTCGATCAACAAG794821GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATCAGCCTTCTCGGCGA
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:22618765-22618784
TGGTTATTTATCCAAGTCTTGGTCAGCAAG22618765GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTCATCAGCCTTCTCAGCAA
Crataegus laevigata genome assembly, chromosome: 7.
OY756944.1:20807212-20807231
CTGGTTTTTATCCAAGTCTTAGTTAGCAAG20807212GATTTTCGAGTCTTTGTTGGCAGGGGTCATCTCATCAACCTTCTCGACGA
Crataegus laevigata genome assembly, chromosome: 8.
OY756945.1:9604146-9604165
TGGTTATTTATCCAAGTCTTGGTCAACAAG9604146GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATCAGTCTTCTCGGCAA
Crataegus laevigata genome assembly, chromosome: 9.
OY756946.1:3476367-3476386
TGATTATTTATCCAAGTCTCAGTCGCCAAG3476367GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTCATTAGCCTTCTAGGTGA
Crataegus laevigata genome assembly, chromosome: 9.
OY756946.1:6486355-6486374
TGGTTATTTATCTAAGTCTCGGTCAACAAG6486355GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTCATCAGCCTTCTTGGCGA
Crataegus laevigata genome assembly, chromosome: 10.
OY756947.1:37936466-37936485
TGGTTATTTATCCAAGTCTTGGTCATCAAG37936466GATTTTCGAGTCTTTGTTGGCAAAAGTCATCTCATCAGCCTTCTCGACAA
Crataegus laevigata genome assembly, chromosome: 12.
OY756949.1:7397694-7397713
TGGTTATTTATTCAAGTCTTGGTTAGCAAG7397694GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTCATCAGTATTCTTAGCGA
Crataegus laevigata genome assembly, chromosome: 12.
OY756949.1:7519607-7519626
TGATTATTTATCCAAGTCTCGGTCAGCAAT7519607GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTCATCAGCCTTCTCGACGA
Crataegus laevigata genome assembly, chromosome: 12.
OY756949.1:14515783-14515802
TAGTTATCTATCTAAGTCTCAATCAACAAG14515783GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATTAGCTTTCTCGGTGA
Crataegus laevigata genome assembly, chromosome: 12.
OY756949.1:23116156-23116175
TAGTTATCTATCCATGTCTCGGTCGGGAAG23116156GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTCATTAGAATTCTCGACGA
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:3181034-3181053
TGGTTATTTATCTAAGTCTTGGTTAGCAAG3181034GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTCATCAGCCTTCTCAATGA
Crataegus laevigata genome assembly, chromosome: 15.
OY756952.1:24332811-24332830
TAGTTATTTATCCAAGTCTCGGTCAGCAAG24332811GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTCATTAGCCTTCTCGGCGA
Crataegus laevigata genome assembly, chromosome: 17.
OY756954.1:19665432-19665451
TGGTTATTTATCCAAGTCTCGGTCGACAAG19665432GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATCAGTCTTCACGACGA
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:7249385-7249404
TGATTACCTATCCAAGTCTCGACCGACACG7249385GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTTATTAGCCTTTTTGGCGA
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:7255560-7255579
TGATTACCTATCTAAGTCTCGACCAATAAG7255560GATTTTCGAGTCTTTGTTGGTATAGGGCATCCCATTAGCCTTTTCGGCGA
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:12847621-12847640
GATAAACAGCATTGTGTTGAGGCCGACAAG12847621GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATGAGCCTTCTCGACGA
Pyrus communis genome assembly, chromosome: 6.
OY757073.1:3201794-3201813
TGATCACCTATCCAAGTCTCGACCGACAAG3201794GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATTAGCCTTCTCGGCAA
Pyrus communis genome assembly, chromosome: 6.
OY757073.1:11282830-11282849
TAATTACCTATCTAAAACTCGGCCGACAAG11282830GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATTAGTCTTCTTGGCGA
Pyrus communis genome assembly, chromosome: 7.
OY757074.1:24556274-24556293
TGATTACCTATCCAAGTCTCAGCTGACAAG24556274GATTTTCGAGTCTTTGTTGGTAGAGGTCATACCATTAGCCTTCTCGATGA
Pyrus communis genome assembly, chromosome: 9.
OY757076.1:18777764-18777783
TGATTACTTATCCAAGTCTCGGCTGACAAG18777764GATTTTCGAGTCTTTGTTGGTAGAAGTCATCTCATTAGCCTTCTCGGCGA
Pyrus communis genome assembly, chromosome: 10.
OY757077.1:26930608-26930627
TAATTATTTATCCAAGTCTCGGTTAAGAAG26930608GATTTTCGAGTCTTTGTTGGCAGAGGTCATCTCATCAGCCTTCTCGGCGA
Pyrus communis genome assembly, chromosome: 11.
OY757078.1:10420293-10420312
ATGTTATGTATCCAAGTCTCAGTCAACAAG10420293GATTTTCGAGTCTTTGTTGGTAGAGGTCATCTCATCAGCCTTGTCGGCAA
Shewanella sp. Pdp11 chromosome, complete genome.
CP015194.1:2780695-2780714
TAGCCTCAAGTGAATAATTCATTAGCCACT2780695GATTTTCGAGTCTTTGTTGGCGCAATAGTCCAATAAGGTATTTAGTCGAT
Shewanella putrefaciens strain YZ08 chromosome, complete genome.
CP080633.1:2216413-2216432
TAGCCTCAAGTGAATAATTCATTAGCCACT2216413GATTTTCGAGTCTTTGTTGGCGCAATAGTCCAATAAGGTATTTAGTCGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GATTTTCGAGTCTTTGTTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GATTTTCGAGTCTTTGTTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.130 | 0.121 | search_plus_done; http://172.18.8.135:50400/match?q=GATTTTCGAGTCTTTGTTGG&k=0&no_gap=0&offset=0&limit=50
0.198 | 0.068 | search_minus_done; http://172.18.8.135:50400/match?q=CCAACAAAGACTCGAAAATC&k=0&no_gap=0&offset=0&limit=0
0.198 | 0.000 | cgi_end;

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