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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 04:26:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Avena sativa genome assembly, chromosome: 2D.
OU342393.1:339890786-339890805
GCACCAGCCTTGGGAACGCTCCCAGACCTG339890786GCAACATCAGATTCGCCCAACTGACCCACTGATGCAGGTGTCATTGTTGG
Avena sativa genome assembly, chromosome: 2D.
OU342393.1:436104681-436104700
GCACCAGCCTTGGTAACGCTCCCAGACCCG436104681GCAACATCAGATTCGCCCAACTGACCCACCGAAGTAGGTGTCATTGTTGG
Avena sativa genome assembly, chromosome: 16.
OV702294.1:351922439-351922458
GCACCAGCCTTGGGAACGCTCCCAGACCTG351922439GCAACATCAGATTCGCCCAACTGACCCACTGATGCAGGTGTCATTGTTGG
Avena sativa genome assembly, chromosome: 16.
OV702294.1:450511167-450511186
GCACCAGCCTTGGTAACGCTCCCAGACCCG450511167GCAACATCAGATTCGCCCAACTGACCCACCGAAGTAGGTGTCATTGTTGG
Dichetophora obliterata genome assembly, chromosome: 1.
OY986435.1:135418810-135418829
ATTTGCTACTCTTCTGTTTTTAAACACAGC135418810GCAACATCAGATTCGCCCAAAAAGGTCGAAGCTTGTCCAATAAGGAATCT
Dichetophora obliterata genome assembly, chromosome: 1.
OY986435.1:135431724-135431743
ATTTGCTACTCTTCTGTTTTTAAACACAGC135431724GCAACATCAGATTCGCCCAAAAAGGTCGAAGCTTGTCCAATAAGGAATCT
Avena insularis genome assembly, chromosome: 2D.
OU342346.1:244133017-244133036
CCAACAATGACACCTACTTCGGTGGGTCAG244133017TTGGGCGAATCTGATGTTGCCGGGTCTGGGAGCGTTACCAAGGCTGGTGC
Pyrus communis genome assembly, chromosome: 9.
OY757076.1:9728154-9728173
CATGCTGTTTTTTTATATAAGATCTTAATC9728154TTGGGCGAATCTGATGTTGCAGGTATGTGCAAAATAATATGTTAACCGGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAACATCAGATTCGCCCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAACATCAGATTCGCCCAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.093 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=GCAACATCAGATTCGCCCAA&k=0&no_gap=0&offset=0&limit=50
0.112 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGGCGAATCTGATGTTGC&k=0&no_gap=0&offset=0&limit=44
0.113 | 0.001 | cgi_end;

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