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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-05 04:15:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Brassica rapa genome, scaffold: A02.
LR031573.1:6302714-6302733
TTTAGGCTTAAAACAACGATAGTTTTATTT6302714GCAACTCGTTGCATCTTTTCCATAAACTATGATATTCTTTGTATAGTCTT
Brassica rapa genome assembly, chromosome: A02.
LS974618.2:6478290-6478309
TTTAGGCTTAAAACAACGATAGTTTTATTT6478290GCAACTCGTTGCATCTTTTCCATAAACTATGATATTCTTTGTATAGTCTT
Macrobrachium nipponense isolate FS-2020 chromosome 36.
CP062024.1:31411529-31411548
CAATTAAGGGCATCAAAAGCGAATGAAATT31411529GCAACTCGTTGCATCTTTTCCGAAGCGAAATTAACTCACAATGACACCGG
Xylota sylvarum genome assembly, chromosome: 1.
LR999957.1:31077712-31077731
GTTCTCAGTGCACCAGTAATACTGAGATAT31077712GCAACTCGTTGCATCTTTTCCATTATAATTAGGTTGGACTTCTTCTCTAG
Nematostella vectensis genome assembly, chromosome: 13.
OW051997.1:10692299-10692318
TTTGACGAGCCTCTTTCACTTTCCAGCTCT10692299GCAACTCGTTGCATCTTTTCAGGGAGTTCTTTAGGCTTCCGCGCGTCTTC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' linkage group A02, pooled multiple clones, *** SEQUENCING IN PROGRESS ***, 130 unordered pieces.
AC234725.2:63100-63119
AAGACTATACAAAGAATATCATAGTTTATG63100GAAAAGATGCAACGAGTTGCAAATAAAACTATCGTTGTTTTAAGCCTAAA
Nemotelus nigrinus genome assembly, chromosome: 3.
OX376374.1:7834165-7834184
TAATTCTATCACAGAAAGTTCTGCCCTGGA7834165GAAAAGATGCAACGAGTTGCACGAGTGGTAGTGGCATTTCGAGGGCATGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAACTCGTTGCATCTTTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAACTCGTTGCATCTTTTC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=GCAACTCGTTGCATCTTTTC&k=0&no_gap=0&offset=0&limit=50
0.123 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=GAAAAGATGCAACGAGTTGC&k=0&no_gap=0&offset=0&limit=45
0.125 | 0.001 | cgi_end;

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