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2025-04-18 10:32:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Salmo trutta genome assembly, chromosome: 3.
LR584416.1:62037167-62037186
GAAACGCGCAGTGCCCTCTCCCCCTGGGCA62037167GCAGACACACATAAAAATCTACATAAGTCCACTTCTGAATATTTTGACTT
RTWW2_18_H04.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda cDNA clone RTWW2_18_H04_A021 5', mRNA sequence.
CF474109.1:45-64
CGAGAACACATGAACACAGACTGCATCCAG45GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
RTCNT1_12_G07.g1_A029 Root control Pinus taeda cDNA clone RTCNT1_12_G07_A029 5', mRNA sequence.
CF664933.1:149-168
CGAGAACACATGAACACAGACTGCATCCAG149GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
FLD1_14_G09.g1_A029 Root flooded Pinus taeda cDNA clone FLD1_14_G09_A029 5', mRNA sequence.
CO159638.1:228-247
CGAGAACACATGAACACAGACTGCATCCAG228GCAGACACACATAAAAATCTACATCGATGGATTTTTCTTTAATTGATCTT
NDL1_16_H07.g1_A029 Needles control Pinus taeda cDNA clone NDL1_16_H07_A029 5', mRNA sequence.
CO170787.1:174-193
CGAGAACACATGAACACAGACTGCATCCAG174GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
NDL1_27_C04.g1_A029 Needles control Pinus taeda cDNA clone NDL1_27_C04_A029 5', mRNA sequence.
CO172135.1:177-196
CGAGAACACATGAACACAGACTGCATCCAG177GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
RTCNT2_4_F05.g1_A029 Root control 2 (late) Pinus taeda cDNA clone RTCNT2_4_F05_A029 5', mRNA sequence.
CO201283.1:50-69
CGAGAACACATGAACACAGACTGCATCCAG50GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
COLD1_35_D02.g1_A029 Root cold Pinus taeda cDNA clone COLD1_35_D02_A029 5', mRNA sequence.
CX649495.1:157-176
CGAGAACACATGAACACAGACTGCATCCAG157GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
COLD1_52_B09.g1_A029 Root cold Pinus taeda cDNA clone COLD1_52_B09_A029 5', mRNA sequence.
CX651455.1:184-203
CGAGAACACATGAACACAGACTGCATCCAG184GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
COLD1_52_B10.g1_A029 Root cold Pinus taeda cDNA clone COLD1_52_B10_A029 5', mRNA sequence.
CX651456.1:147-166
GGAGAACGCATGAACACAGACTGCATCCAG147GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
COLD1_61_F09.g1_A029 Root cold Pinus taeda cDNA clone COLD1_61_F09_A029 5', mRNA sequence.
CX652835.1:147-166
CGAGAACACATGAACACAGACTGCATCCAG147GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
HEAT1_23_B10.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone HEAT1_23_B10_A029 3', mRNA sequence.
DR014038.1:107-126
CGAGAACACATGAACACAGACTGCATCCAG107GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
STRS1_18_H05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda cDNA clone STRS1_18_H05_A034 5', mRNA sequence.
DR017851.1:130-149
CGAGAACACATGAACACAGACTGCATCCAG130GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
RTNIT1_4_E04.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone RTNIT1_4_E04_A029 5', mRNA sequence.
DR057263.1:110-129
CGAGAACACATGAACACAGACTGCATCCAG110GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
RTNIT1_19_H11.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone RTNIT1_19_H11_A029 3', mRNA sequence.
DR059723.1:134-153
CGAGAACACATGAACACAGACTGCATCCAG134GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
RTDK1_5_E02.g1_A029 Roots, dark Pinus taeda cDNA clone RTDK1_5_E02_A029 5', mRNA sequence.
DR069216.1:46-65
CGAGAACACATGAACACAGACTGCATCCAG46GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
RTDK1_5_H07.g1_A029 Roots, dark Pinus taeda cDNA clone RTDK1_5_H07_A029 5', mRNA sequence.
DR069248.1:36-55
CCGAGAACCATGAACACAGACTGCATCCAG36GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
RTDK1_23_D01.b1_A029 Roots, dark Pinus taeda cDNA clone RTDK1_23_D01_A029 3', mRNA sequence.
DR071952.1:25-44
CACATGAACACAGACTGCATCCAG25GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
STRR1_31_F09.b1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_31_F09_A033 3', mRNA sequence.
DR096919.1:210-229
CGAGAACACATGAACACAGACTGCATCCAG210GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
STRR1_31_F09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_31_F09_A033 5', mRNA sequence.
DR097000.1:159-178
CGAGAACACATGAACACAGACTGCATCCAG159GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
RTS1_3_E10.b1_A029 Roots minus sulfur Pinus taeda cDNA clone RTS1_3_E10_A029 3', mRNA sequence.
DR109575.1:424-443
CGACAACACATGAACACAGACTGCATCCAG424GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
RTS1_20_C06.g1_A029 Roots minus sulfur Pinus taeda cDNA clone RTS1_20_C06_A029 5', mRNA sequence.
DR111834.1:63-82
CGAGAACACATGAACACATACTGCATCCAG63GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
RTPHOS1_18_D04.g1_A029 Roots minus phosphorous Pinus taeda cDNA clone RTPHOS1_18_D04_A029 5', mRNA sequence.
DR167407.1:159-178
CGAGAACACATGAACACAGACTGCATCCAG159GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
RTCU1_5_B07.g2_A029 Roots plus added copper Pinus taeda cDNA clone RTCU1_5_B07_A029 5', mRNA sequence.
DR742631.1:138-157
CGAGAACACATGAACACAGACTGCATCCAG138GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
FEGLCD004_06-F09-F PD_BX library Pinus densiflora cDNA clone FEGLCD004_06-F09-F, mRNA sequence.
FG615521.1:93-112
CGAGAACACATGAACACAGACAGCATCCAG93GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
Pinus radiata EST, clone C2-5-128.
FR730257.1:144-163
CGAGAACACATGAACACAGACAGCATCCAG144GCAGACACACATAAAAATCTACATCGATGCATTTTTCGTTAATTGTTCTT
Pinus radiata EST, clone C2-5-166.
FR730285.1:145-164
CGAGAACACATGAACACAGACAGCATCCAG145GCAGACACACATAAAAATCTACATCGATGCATTTTTCGTTAATTGTTCTT
PBA0212.CR_O22 Pba02-Xylem-wounded-Norm (PBA02) Pinus banksiana cDNA clone PBA0212_O22 3', mRNA sequence.
GW758746.1:166-185
CGAGAACACATGAACACAGACATCATCCAG166GCAGACACACATAAAAATCTACATCGATGCATTTTTTTAATTGATCTTCA
Pinus sylvestris EST, clone WZ0APSBA1YP08NM1.
HE628441.1:174-193
CGAGAACACATGAACACAGACAGCATCCAG174GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
Pinus sylvestris EST, clone WZ0APSBA5YD16NM1.
HE630035.1:162-181
CGAGAACACATGAACACAGACAGCATCCAG162GCAGACACACATAAAAATCTACATCGATGCATTTTTCTTTAATTGATCTT
OM__Ba0135N09.f OM__Ba Oryza minuta genomic clone OM__Ba0135N09 5', genomic survey sequence.
CZ609700.1:521-540
TTTATATTCATCAATCCATTCATGTAGATG521GCAGACACACATAAAAATCTTAGGATAATCATATGTATCAGGTAAGACTG
Oryza officinalis clone OO__Ba0089G05, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC216668.3:147731-147750
TTTATATTCATCAATCCATTCATGTAGATG147731GCAGACACACATAAAAATCTTAGGATAATCATATGTATCAGGTAATACTG
Oryza officinalis clone OO__Ba0089G05, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC216668.3:151412-151431
TTTATATTCATCAATCCATTCATGTAGATG151412GCAGACACACATAAAAATCTTAGGATAATCATATGTATCAGGTAAGACTG
Oryza minuta clone OM__Ba0044A22, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
AC226071.1:62867-62886
TTTATATTCATCAATCCATTCATGTAGATG62867GCAGACACACATAAAAATCTTAGGATAATCATATGTATCAGGTAAGACTG
Oryza minuta clone OM__Ba0044A22, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
AC226071.1:74524-74543
TTTATATTCATCAATCCATTCATGTAGATG74524GCAGACACACATAAAAATCTTAGGATAATCATATGTATCAGGTAAGACTG
Oryza officinalis clone OO__Ba0107F16, complete sequence.
AC213146.2:32123-32142
TTTATATTCATCAATCCATTCATGTAGATG32123GCAGACACACATAAAAATCTTAGGATAATCATATGTATCAGGTAATACTG
Oryza officinalis clone OO__Ba0107F16, complete sequence.
AC213146.2:35804-35823
TTTATATTCATCAATCCATTCATGTAGATG35804GCAGACACACATAAAAATCTTAGGATAATCATATGTATCAGGTAAGACTG
Tridacna crocea genome assembly, chromosome: 3.
OX031058.1:26665699-26665718
AATGATAAAATAGCTCAATTTCAATGAAAG26665699GCAGACACACATAAAAATCTACTGAAAAATATACTCTAATTATTATAAAT
Villa cingulata genome assembly, chromosome: 2.
OX596019.1:37745097-37745116
ATAAATACTTAAATTAATTATCATTTAAAT37745097GCAGACACACATAAAAATCTACTTAATATTACAATGGATACAATAATTTC
Microcaecilia unicolor genome assembly, chromosome: 3.
LR594634.1:339081997-339082016
CGTAAAAGCAGGTGCACGTTTTTCATTTGC339081997AGATTTTTATGTGTGTCTGCAGTTGCACAATTTAACATAAGCCTTTTCGG
NXLV103_E01_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA clone NXLV103_E01 5' similar to Arabidopsis thaliana sequence At3g51240 flavanone 3-hydroxylase (FH3) see http://mips.gsf.de/proj/tha
BQ107716.1:429-448
AAGATCAATTAAAGAAAAATGCATCGATGT429AGATTTTTATGTGTGTCTGCCTGGATGCAGTCTGTGTTCATGTGTTGTCG
Pinus pinaster xylem EST, clone PP077G11.
BX253091.1:179-198
AAGATCAATTAAAGAAAAATGCATCGATGT179AGATTTTTATGTGTGTCTGCCTGGATGCTGTCTGTGTTCATGTGTTCTCC
RTDR1_15_H09.b1_A015 Loblolly pine roots recovering from drought DR1 Pinus taeda cDNA clone RTDR1_15_H09_A015 3', mRNA sequence.
CF386540.1:365-384
AAGATCAATTAAAGAAAAATGCATCGATGT365AGATTTTTATGTGTGTCTGCCTGGATGCAGTCTGTGTTCATGTGTTCTCG
RTDR1_10_G04.b1_A015 Loblolly pine roots recovering from drought DR1 Pinus taeda cDNA clone RTDR1_10_G04_A015 3', mRNA sequence.
CF387022.1:407-426
AAGATCAATTAAAGAAAAATGCATCGATGT407AGATTTTTATGTGTGTCTGCCTGGATGCAGTCTGTGTTCATGTGTTCTCG
RTDR1_17_F11.b1_A015 Loblolly pine roots recovering from drought DR1 Pinus taeda cDNA clone RTDR1_17_F11_A015 3', mRNA sequence.
CF387964.1:406-425
AAGATCAATTAAAGAAAAATGCATCGATGT406AGATTTTTATGTGTGTCTGCCTGGATGCAGTCTGTGTTCATGTGTTCTCG
RTDR2_8_D06.g1_A021 Loblolly pine roots recovering from drought DR2 Pinus taeda cDNA clone RTDR2_8_D06_A021 5', mRNA sequence.
CF389602.1:519-538
AAGATCAATTAAAGAAAAATGCATCGATGT519AGATTTTTATGTGTGTCTGCCTGGATGCAGTCTGTGTTCATGTGTTCTCG
RTDR3_9_A11.b1_A022 Loblolly pine roots recovering from drought DR3 Pinus taeda cDNA clone RTDR3_9_A11_A022 3', mRNA sequence.
CF391448.1:404-423
AAGATCAATTAAAGAAAAATGCATCGATGT404AGATTTTTATGTGTGTCTGCCTGGATGCAGTCTGTGTTCATGTGTTCTCG
RTDS2_21_A01.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus taeda cDNA clone RTDS2_21_A01_A021 3', mRNA sequence.
CF396254.1:538-557
AAGATCAATTAAAGAAAAATGCATCGATGT538AGATTTTTATGTGTGTCTGCCTGGATGCAGTCTGTGTTCATGTGTTCTCG
RTDS3_16_D06.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus taeda cDNA clone RTDS3_16_D06_A022 3', mRNA sequence.
CF398761.1:407-426
AAGATCAATTAAAGAAAAATGCATCGATGT407AGATTTTTATGTGTGTCTGCCTGGATGCAGTCTGTGTTCATGTGTTCTCG
RTWW1_24_B04.b1_A015 Well-watered loblolly pine roots WW1 Pinus taeda cDNA clone RTWW1_24_B04_A015 3', mRNA sequence.
CF403002.1:405-424
AAGATCAATTAAAGAAAAATGCATCGATGT405AGATTTTTATGTGTGTCTGCCTGGATGCAGTCTGTGTTCATGTGTTCTCG
RTDS1_7_D03.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus taeda cDNA clone RTDS1_7_D03_A015 3', mRNA sequence.
CF471840.1:405-424
AAGATCAATTAAAGAAAAATGCATCGATGT405AGATTTTTATGTGTGTCTGCCTGGATGCAGTCTGTGTTCATGTGTTCTCG
OM__Ba0161B16.f OM__Ba Oryza minuta genomic clone OM__Ba0161B16 5', genomic survey sequence.
CZ623289.1:685-704
CAGTCTTACCTGATACATATGATTATCCTA685AGATTTTTATGTGTGTCTGCCATCTACATGAATGGATTGATGAATATAAA
Pinus radiata flavanone 3-hydroxylase (F3H) mRNA, complete cds.
KF704818.1:1279-1298
AAGAACAATTAACGAAAAATGCATCGATGT1279AGATTTTTATGTGTGTCTGCCTGGATGCTGTCTGTGTTCATGTGTTCTCG
Diatraea saccharalis genome assembly, chromosome: 6.
OU893337.1:11393506-11393525
CTAAAGGTATCTGCTGAAAATACTAAAATG11393506AGATTTTTATGTGTGTCTGCCAATTTTATTCCTAGGCCACTGTTACTTTA
Bimastos eiseni genome assembly, chromosome: 1.
OY365806.1:60143189-60143208
AGACTTTTATACGGTCATGCAATTAGGTTA60143189AGATTTTTATGTGTGTCTGCATTAAGGTCAACACTTCTGTGTAATTTAAT
Thymelicus lineola genome assembly, chromosome: 12.
OZ010692.1:16566107-16566126
ACTTTAAAAGTGGGATGGTCGCCAGGTACA16566107AGATTTTTATGTGTGTCTGCGTTACGTTATTTACATAATTATCTCAATCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAGACACACATAAAAATCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGACACACATAAAAATCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.537 | 1.528 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGACACACATAAAAATCT&k=0&no_gap=0&offset=0&limit=50
1.927 | 0.390 | search_minus_done; http://172.18.8.135:50400/match?q=AGATTTTTATGTGTGTCTGC&k=0&no_gap=0&offset=0&limit=11
1.939 | 0.012 | cgi_end;

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