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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-07 17:52:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pipistrellus pipistrellus genome assembly, chromosome: 1.
LR862356.1:92089504-92089522
TCTGAGTTTGATTCAATTCTTGGCTGAGGG92089504GCAGATGGAGAAGCCATGAGAGGTTGTGGATGTATAAGAATGAATCTTT
Pipistrellus pipistrellus genome assembly, chromosome: 2.
LR862357.1:92368117-92368135
CAGAGACACAGGCCAAGTCTCGGTGGCAGG92368117GCAGATGGAGAAGCCATGAGAAGCCATGAGATGGTGGCGCCCAGTCCCT
Pipistrellus pipistrellus genome assembly, chromosome: 3.
LR862358.1:164302668-164302686
TAGTTCCTGCTTTATTCTCTGCTCTGCCTG164302668GCAGATGGAGAAGCCATGATCGGTTGTGGGTGTATGAGAGTGAGTCCTT
Pipistrellus pipistrellus genome assembly, chromosome: 5.
LR862361.1:2814189-2814207
CAGGGGCTGGGCCTTGTTGGGCGCTGGCTG2814189GCAGATGGAGAAGCCATGAGAACTGGTGGGTTTATGAGAGTCTCTACTG
Pipistrellus pipistrellus genome assembly, chromosome: 5.
LR862361.1:2886474-2886492
CAGGGGCTGGGCCTTGTTGGGCGCTGGCTG2886474GCAGATGGAGAAGCCATGAGAACTGGTGGGTTTATGAGAGTCTCTACTG
Pipistrellus pygmaeus genome assembly, chromosome: 1.
OX465302.1:118590507-118590525
TCTGAGTTTGATTCAATTCTTGGCTGAGGG118590507GCAGATGGAGAAGCCATGAGAGGTTGTGGATGTATAAGAATGAATCTTT
Pipistrellus pygmaeus genome assembly, chromosome: 2.
OX465303.1:93547095-93547113
CAGAGACACAGGCCAAGTCCTGGTGGCAGG93547095GCAGATGGAGAAGCCATGAGAAGCCATGAGATGGTGGCGCCCAGTCCCT
Pipistrellus pygmaeus genome assembly, chromosome: 3.
OX465304.1:169458779-169458797
TAGTTCCTGCTTTATTCTCTGCTCTGCCTG169458779GCAGATGGAGAAGCCATGATCAGTTGTGGGTATATGAGAGTGAGTCCTT
Eptesicus nilssonii genome assembly, chromosome: 3.
OX621282.1:95956283-95956301
CAGAGACACAGGTAAATTCTCTGCGACGGG95956283GCAGATGGAGAAGCCATGAGAAGTTGTGGGCATGTAAGAATGAGTCTTT
Eptesicus nilssonii genome assembly, chromosome: 3.
OX621282.1:101815127-101815145
CGGAGACACAGGTCAAGTCTCGGTGGCAGG101815127GCAGATGGAGAAGCCATGAGAAGCTGTGGGCATATCAGAATGAGACTTC
Eptesicus nilssonii genome assembly, chromosome: 8.
OX621287.1:79223018-79223036
AGGAACACTGAGTCAATTCTTGGTGGCAGG79223018GCAGATGGAGAAGCCATGAGAGGTTGTAGGTGTATAAGAATGAGTTTTT
Eptesicus nilssonii genome assembly, chromosome: 12.
OX621291.1:21726045-21726063
ACTAGACACAGGTCAGTTCTTGGCGGCGGG21726045GCAGATGGAGAAGCCATGAGAGGTTATGAGTGTACAGGTGTTTAAGGAT
Myotis daubentonii genome assembly, chromosome: 1.
OY725359.1:101398206-101398224
CAGAGTCAGCAGGTCACTTATTGGTGGCAG101398206GCAGATGGAGAAGCCATGAGAACTTGTGGGTGTATAAGAATGAGTCTTT
Myotis daubentonii genome assembly, chromosome: 2.
OY725360.1:194292229-194292247
CTGCTTTATTCTCTGCTCACTAGTTACGGG194292229GCAGATGGAGAAGCCATGAGAGGTTGTGGGCATAAAAGAATGAGTTTTT
Myotis daubentonii genome assembly, chromosome: 3.
OY725361.1:98258935-98258953
CAGAGACACAGGTAAATTCTCTGTGACGGG98258935GCAGATGGAGAAGCCATGAGAAGTTGTGGGTATATAAGAATGAGTCTTT
Myotis daubentonii genome assembly, chromosome: 5.
OY725364.1:16831342-16831360
CCTAGACACAGCTCAATTCTTGGCGGTGGG16831342GCAGATGGAGAAGCCATGAGAAGTTGTGGGTATAGAAGAATGAGTCTTT
Plecotus auritus genome assembly, chromosome: 1.
OY734022.1:108379742-108379760
AGAGTCAGCAGGTCAATTATTGGTGGCAGG108379742GCAGATGGAGAAGCCATGAGAAGTTGTGGGTGTTTAAGAATGAGTCTTT
Plecotus auritus genome assembly, chromosome: 1.
OY734022.1:139195655-139195673
TCTGAGTATGATTCAATTGTTGGCGGTGGG139195655GCAGATGGAGAAGCCATGAGAAGTTGTGGGTGTATAAGAATGAGTCTTT
Plecotus auritus genome assembly, chromosome: 2.
OY734023.1:75286563-75286581
GTCAATTCTCGGTGGGGCGGCGGGGGGGGG75286563GCAGATGGAGAAGCCATGAGAGGTTGTGGGTATATAAGAATGAATCTTT
Plecotus auritus genome assembly, chromosome: 2.
OY734023.1:106086042-106086060
TAGTTACACAGGTCAATTCTCGGCAGCAGA106086042GCAGATGGAGAAGCCATGAGAGGTTGTGGGTGTATAAGAATGAGTCTTT
Plecotus auritus genome assembly, chromosome: 8.
OY734029.1:90319238-90319256
AGGGACACGAGGTCAATTCTCGGCCGCGGG90319238GCAGATGGAGAAGCCATGAGAAGTTGTGAGTGAGCAAGAATAATCTCTA
Plecotus auritus genome assembly, chromosome: 8.
OY734029.1:116471348-116471366
TGTGCGTACGTTTTAATTCTTGATGGTGGG116471348GCAGATGGAGAAGCCATGAGAAGTTGTGGGTGCATAAGAATGAGTTTTT
Pipistrellus nathusii genome assembly, chromosome: 2.
OY882859.1:93958697-93958715
TAGTTACACAGGTCAATTCTCGCCAGGGGA93958697GCAGATGGAGAAGCCATGAGAGGTTGTGGGTGTATAAGAATGAGTCTTC
Pipistrellus nathusii genome assembly, chromosome: 2.
OY883179.1:94252492-94252510
TAGTTACACAGGTCAATTCTCGCCAGGGGA94252492GCAGATGGAGAAGCCATGAGAGGTTGTGGGTGTATAAGAATGAGTCTTC
Vespertilio murinus genome assembly, chromosome: 3.
OZ004706.1:96178489-96178507
TAGTTACACAGGTCAATTCTCGGAAGGGGA96178489GCAGATGGAGAAGCCATGAGAGGTTGTGGGTGTATTGCAGAAACCAGTG
Vespertilio murinus genome assembly, chromosome: 4.
OZ004707.1:21643717-21643735
CAGAGACACAGGTCAATTCTCAGCTGCGGG21643717GCAGATGGAGAAGCCATGATCGGTTGTGGAGATATAAGAATGAGTCACA
Rana temporaria genome assembly, chromosome: 4.
LR991683.1:38084037-38084055
CGGTGTCTGATACACAGGAAGCGAGAGACA38084037GCAGATGGAGAAGCCATGATTTCTGGTTTTATGATTATGCTGGATGATC
Arachis hypogaea DNA, clone: KICT01H11.
DH965872.1:457-475
GGAGGAGGAGGAGGAGGAGGCGGCGGAGGT457GCAGATGGAGAAGCCATGAAGAAA
Arachis hypogaea cultivar Shitouqi chromosome B04.
CP030996.1:125914977-125914995
GGAGGAGGAGGAGGAGGAGGCGGCGGAGGT125914977GCAGATGGAGAAGCCATGAAGAATCTTGTTGCTCAAGTAAGTGAGAGAG
Arachis ipaensis cultivar K30076 chromosome 04.
CP049895.1:138705907-138705925
GGAGGAGGAGGAGGAGGAGGCGGCGGAGGT138705907GCAGATGGAGAAGCCATGAAGAATCTTGTTGCTCAAGTAAGTGAGAGAG
Geum urbanum genome assembly, chromosome: 18.
OX327014.1:5494258-5494276
TTGCTTCTGTCAGGAGAAAGAGAAGAGGAA5494258GCAGATGGAGAAGCCATGAATGGTTGGTTGTTCTAGCTAGTAGCACTGA
Geum urbanum genome assembly, chromosome: 19.
OX327015.1:3196682-3196700
ATGCTTCTGTCAGGAGAAACAGAAGAGGAA3196682GCAGATGGAGAAGCCATGAATGGTTGTTCTAGCTAGTAGCACTGAAAAT
Geum urbanum genome assembly, chromosome: 21.
OX327017.1:3461601-3461619
ATGCTTCTGTCAGGAGAAAGAGAAGAGGAA3461601GCAGATGGAGAAGCCATGAATGGTTGTTCTAGCTAGTAGCACTGAAAAT
Pseudomonas lalkuanensis strain PE08 chromosome, complete genome.
CP043311.1:5206356-5206374
GGTGTTTACCCGTACAGGTAAAGTTTTCGA5206356GCAGATGGAGAAGCCATGAAGCGCAAGCAATCGATCGAATCAGTACGCT
Thelaira solivaga genome assembly, chromosome: 1.
OX377610.1:85293043-85293061
TTTTATTTCCGTCTAAATGCTAAAAAAGTA85293043GCAGATGGAGAAGCCATGAAAATTCATTTGAGGTTTTGTTAAAGTTGGA
Pipistrellus pipistrellus genome assembly, chromosome: 3.
LR862358.1:168182598-168182616
AAAGACTCATTCTTATATATCCACAACTCA168182598TCATGGCTTCTCCATCTGCCCCGCCGCTGAGAAATGACCTGTGTCTCTG
Rangifer tarandus platyrhyncus genome assembly, chromosome: 4.
OX459940.2:96580782-96580800
AGATTGGGACCAGTCGAACCTGCACTCCAG96580782TCATGGCTTCTCCATCTGCTGGCCAGGAGACCTCTGGAGAGTGACCCTA
Pipistrellus pygmaeus genome assembly, chromosome: 3.
OX465304.1:173482441-173482459
AAAGACTCATTCTTATATATCCACAACTCA173482441TCATGGCTTCTCCATCTGCCCCGCCGCTGAGAAATGACCTGTGTCTCTG
Pipistrellus pygmaeus genome assembly, chromosome: 5.
OX465307.1:97940139-97940157
CAGTAGAGACTCTCATAAACCCACCACTTC97940139TCATGGCTTCTCCATCTGCCAGCCAGCGCCCAACAAGGCCCAGCCCCTG
Rangifer tarandus platyrhyncus genome assembly, chromosome: 3.
OX596087.1:94870549-94870567
AGATTGGGACCAGTCGAACCTGCACTCCAG94870549TCATGGCTTCTCCATCTGCTGGCCAGGAGACCTCTGGAGAGTGACCCTA
Eptesicus nilssonii genome assembly, chromosome: 1.
OX621280.1:17366413-17366431
AAAGACTCATTCTTATACAGCCACAATCTC17366413TCATGGCTTCTCCATCTGCCCCACTGCCAAGAATTGAATCATACTCAGA
Eptesicus nilssonii genome assembly, chromosome: 1.
OX621280.1:33742912-33742930
AAAGATTCATTTTTATATACCCACTACTTT33742912TCATGGCTTCTCCATCTGCCCTGCCACCAAGAATTGACCTGTGTCTCTG
Eptesicus nilssonii genome assembly, chromosome: 5.
OX621284.1:2120101-2120119
CAACAGAGACTCTCGTACACCCACCACTTC2120101TCATGGCTTCTCCATCTGCCACCCGGCGCCCAAGCAGGCCCAGCCCCTG
Eptesicus nilssonii genome assembly, chromosome: 7.
OX621286.1:3538106-3538124
AAAGACTCATTTTTAAACACCCACAACCTC3538106TCATGGCTTCTCCATCTGCTCCGCTGCCGAGAATTGACCTGTGTAACTA
Eptesicus nilssonii genome assembly, chromosome: 8.
OX621287.1:84354872-84354890
AAAGACTCATACTTATATATCCACAACTTC84354872TCATGGCTTCTCCATCTGCCCCACTGCCAAGAATTGACCTGTGTCTCTG
Myotis daubentonii genome assembly, chromosome: 1.
OY725359.1:80059915-80059933
AAAGAATCATTCTTATATACCCACACCTTC80059915TCATGGCTTCTCCATCTGCTCCACTGCTGAGAATTGTATCGTACTCCGA
Myotis daubentonii genome assembly, chromosome: 1.
OY725359.1:172311831-172311849
AAAGACTCATTTTTATATGCCCACAACTTC172311831TCATGGCTTCTCCATCTGCCCTGCCACCAAGAATTGATCTGTGACTCTC
Myotis daubentonii genome assembly, chromosome: 3.
OY725361.1:117463549-117463567
AAAGACGCATTCTTATATACCCACAACCTC117463549TCATGGCTTCTCCATCTGCCCCACGAATTGACCTGTGTAACTAGTGAGC
Myotis daubentonii genome assembly, chromosome: X.
OY725362.1:8996884-8996902
ATAGACTCATTCTTATATATCCACAACTTC8996884TCATGGCTTCTCCATCTGCCTCACTGCAGAGAATTGACGTGTGTCTTTG
Myotis daubentonii genome assembly, chromosome: 12.
OY725371.1:22101951-22101969
AAAGACTCATTCTGATGCACCCACAGCTTC22101951TCATGGCTTCTCCATCTGCCCCGCCATCGAGAATTGAAACCTACTCAAA
Desulfovibrionaceae bacterium isolate 0e13dead-c97d-465e-96e4-3b16588dd403 genome assembly, chromosome: 15.
OY763534.1:102098-102116
AGGGAATCGCGAAAGGGGCAATAAGAATCT102098TCATGGCTTCTCCATCTGCAGGGACTAGGCGTCATGAAGACATGGCTCG
Arachis hypogaea DNA, clone: AHGS40D23.
DH961622.1:248-266
CTCTCTCACTTACTTGAGCAACAAGATTCT248TCATGGCTTCTCCATCTGCACCTCCGCCGCCTCCTCCTCCTCCACCTCC
Glycine max strain Williams 82 clone GM_WBa0061H15, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC235821.1:64538-64556
GTATGTTGTTGTATGTTATTGTATAAAGGA64538TCATGGCTTCTCCATCTGCCTCCCCTCCTCCTCCTCCTTCTCCTCCTTT
Glycine max strain Williams 82 clone GM_WBb0047F01, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces.
AC236157.1:12213-12231
GTATGTTGTTGTATGTTATTGTATAAAGGA12213TCATGGCTTCTCCATCTGCCTCCCCTCCTCCTCCTCCTTCTCCTCCTTT
Arachis hypogaea cultivar Shitouqi chromosome B04.
CP030996.1:133789826-133789844
CTCTCTCACTTACTTGAGCAACAAGATTCT133789826TCATGGCTTCTCCATCTGCACCTCCGCCGCCTCCTCCTCCTCCTCCTCC
Glycine max cultivar Williams 82 chromosome 14.
CP126439.1:45910297-45910315
TTATTAACCCTGGTTTTTTTGTATGTAGGA45910297TCATGGCTTCTCCATCTGCCTCGCCTCCTCCTCCTCCTCCTCCTCCTTC
Glycine max cultivar Williams 82 chromosome 18.
CP126443.1:17754377-17754395
GTATGTTGTTGTATGTTATTGTATAAAGGA17754377TCATGGCTTCTCCATCTGCCTCCCCTCCTCCTCCTCCTTCTCCTCCTTT
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143382.1:11774771-11774789
CTCTTTTTGTCTGAATCTAGCATCTGATTG11774771TCATGGCTTCTCCATCTGCATCCTCGTCTCTGATGGATCCACCGCCATT
Pyrus communis genome assembly, chromosome: 11.
OY757078.1:16179932-16179950
CTCTTTTCTTCTGAATCTTGTCTCTGATTG16179932TCATGGCTTCTCCATCTGCATCCTTGTCTTTGATGGATCCACCGCCATT
Viola odorata genome assembly, chromosome: 5.
OY829541.1:28832696-28832714
GGGTTCTGTTGCCTTCACTTTCTCTTTTCC28832696TCATGGCTTCTCCATCTGCTTCACTTGCGCCTTTGGAAAGGCCTGAGAC
Christensenella sp. Marseille-P2438 genome assembly, chromosome: contig00001.
LT700187.1:387966-387984
CCTTATGGAACACTTTCTTTCCCTTTTTGA387966TCATGGCTTCTCCATCTGCAAAGTCCGCTTCTTTGAGCGCGCGGAATTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAGATGGAGAAGCCATGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGATGGAGAAGCCATGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.125 | 0.116 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGATGGAGAAGCCATGA&k=0&no_gap=0&offset=0&limit=50
0.202 | 0.077 | search_minus_done; http://172.18.8.135:50400/match?q=TCATGGCTTCTCCATCTGC&k=0&no_gap=0&offset=0&limit=15
0.219 | 0.017 | cgi_end;

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