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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 15:50:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737395.1:413338000-413338017
TGGAGATGGAGATGGAGGGGCGGCGGCGGA413338000GCAGCATCTGTCGCATGCCGTCGGCGACCCTGAGCGCGGGGTCCTTTG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737402.1:404708259-404708276
TGGAGATGGAGATGGAGGGGCGGCGGCGGA404708259GCAGCATCTGTCGCATGCCGTCGGCGACCCTGAGCGCGGGGTCCTTTG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737419.1:403436744-403436761
TGGAGATGGAGATGGAGGGGCGGCGGCGGA403436744GCAGCATCTGTCGCATGCCGTCGGCGACCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737484.1:402589943-402589960
TGGAGATGGAGATGGAGGGGCGGCGGCGGA402589943GCAGCATCTGTCGCATGCCGTCGGCGATCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737492.1:400461164-400461181
TGGAGATGGAGATGGAGGGGCGGCGGCGGA400461164GCAGCATCTGTCGCATGCCGTCGGCGATCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737499.1:315227680-315227697
TGGAGATGGAGATGGAGGGGCGGCGGCGGA315227680GCAGCATCTGTCGCATGCCGTCGGCGATCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737513.1:377440160-377440177
TGGAGATGGAGATGGAGGGGCGGCGGCGGA377440160GCAGCATCTGTCGCATGCCGTCGGCGATCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737528.1:400185716-400185733
TGGAGATGGAGATGGAGGGGCGGCGGCGGA400185716GCAGCATCTGTCGCATGCCGTCGGCGACCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737542.1:400899938-400899955
TGGAGATGGAGATGGAGGGGCGGCGGCGGA400899938GCAGCATCTGTCGCATGCCGTCGGCGACCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737643.1:359279174-359279191
TGGAGATGGAGATGGAGGGGCGGCGGCGGA359279174GCAGCATCTGTCGCATGCCGTCGGCGATCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737650.1:403216991-403217008
TGGAGATGGAGATGGAGGGGCGGCGGCGGA403216991GCAGCATCTGTCGCATGCCGTCGGCGATCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737657.1:409723634-409723651
TGGAGATGGAGATGGAGGGGCGGCGGCGGA409723634GCAGCATCTGTCGCATGCCGTCGGCGATCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737664.1:345955987-345956004
TGGAGATGGAGATGGAGGGGCGGCGGCGGA345955987GCAGCATCTGTCGCATGCCGTCGGCGATCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737869.1:394143348-394143365
TGGAGATGGAGATGGAGGGGCGGCGGCGGA394143348GCAGCATCTGTCGCATGCCGTCGGCGATCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737876.1:375235419-375235436
TGGAGATGGAGATGGAGGGGCGGCGGCGGA375235419GCAGCATCTGTCGCATGCCGTCGGCGATCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737883.1:402207634-402207651
TGGAGATGGAGATGGAGGGGCGGCGGCGGA402207634GCAGCATCTGTCGCATGCCGTCGGCGATCCTGAGCGCGGGGTCCTTGG
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737890.1:396974904-396974921
TGGAGATGGAGATGGAGGGGCGGCGGCGGA396974904GCAGCATCTGTCGCATGCCGTCGGCGATCCTGAGCGCGGGGTCCTTGG
Agrobacterium vaccinii strain B19.1.4 chromosome linear, complete sequence.
CP054147.1:579784-579801
GATACCGCACATCAGCGGACGCCAGCCCGT579784GCAGCATCTGTCGCATGCCGCCTTCTGGATGATCTTTATCGGGTTCAA
Agrobacterium vaccinii strain B7.6 chromosome linear, complete sequence.
CP054151.1:527030-527047
GATACCGCACATCAACGGACGCCAGCCCGT527030GCAGCATCTGTCGCATGCCGCCTTCTGGATGATCTTTATCGGGTTCAA
Streptomyces sp. NBC_01283 chromosome, complete genome.
CP108430.1:7548759-7548776
AGTTCCCCGCGCCCCTGACGGGGCGCCGTG7548759GCAGCATCTGTCGCATGCTGAACCGGTTCGTCCCCCGTGCCCTGGCCG
Apteryx australis mantelli genome assembly, scaffold: scaffold107.
LK064678.1:1207681-1207698
CCCCACAGAGGTACATCCCTTTTGCTCTGT1207681GCATGCGACAGATGCTGCTTTTGCCCACAAAGCTATAGCGAAGGCCTA
CYC036H15_T7 Common carp BAC library Cyprinus carpio genomic clone CYC036H15, genomic survey sequence.
HR526421.1:245-262
AGTCAAAATTATTGTGTGCCATAATTGAGA245GCATGCGACAGATGCTGCCCACAGATGTGAAGTTTACAATAACCTGGA
Thuidium tamariscinum genome assembly, chromosome: 1.
OX344749.1:30847254-30847271
TCACTGTCGTCCTCCTCGAGAAGATTATCC30847254GCATGCGACAGATGCTGCACCCCTCCGTCTCCGTCTCCGTCTCGATAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAGCATCTGTCGCATGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGCATCTGTCGCATGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGCATCTGTCGCATGC&k=0&no_gap=0&offset=0&limit=50
0.182 | 0.076 | search_minus_done; http://172.18.8.135:50400/match?q=GCATGCGACAGATGCTGC&k=0&no_gap=0&offset=0&limit=30
0.184 | 0.002 | cgi_end;

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