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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-17 18:22:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Allium cepa genome assembly, chromosome: 2.
LR994630.1:150468947-150468966
ATGCGTTGTCTGGTAAAATAAATACAAGGT150468947GCCAACTCCTTCCTTGTAGATATATTGAAACTTCCAACCTAACATCACAA
Allium cepa genome assembly, chromosome: 2.
LR994630.1:389541339-389541358
ATGCGTTGTCTGGTAAAATAAATACAAGGT389541339GCCAACTCCTTCCTTGTAGATATATCGAAACTTCCAACCTTAACATTGCA
Allium cepa genome assembly, chromosome: 5.
LR994633.1:114153944-114153963
ATGCGTTGTCTGGTAAAATAAATACAAGGT114153944GCCAACTCCTTCCTTGTAGATATATCGAAACATCCAACCTTAACATCGCA
Thyatira batis genome assembly, chromosome: 17.
LR990502.1:5107441-5107460
ACCCCGAAGTTATGGTAGTAAGCAAACTAG5107441GCCAACTCCTTCCTTGTAGATCAATAGGATCTAAGTGGTAAAACCAGATG
Sepioteuthis lessoniana genome assembly, chromosome: 10.
OY757913.1:48490985-48491004
TGACATATAAACCTTCGTGGGTTACGTAAT48490985GCCAACTCCTTCCTTGTAGAATAATTTTGTGGTACGATTTAACCCATAGC
TSA: Cannabis sativa PK20543.1_1.CasaPuKu mRNA sequence.
JP450170.1:187-206
TCTCTTCGGAGAAGACTCGTTCAGTTGATT187TCTACAAGGAAGGAGTTGGCGGTGGCGGTGGGGGTGGTGGTGGTGGTGGA
TSA: Cannabis sativa PK20543.2_1.CasaPuKu mRNA sequence.
JP456216.1:42-61
TCTCTTCGGAGAAGACTCGTTCAGTTGATT42TCTACAAGGAAGGAGTTGGCGGTGGCGGTGGGGGTGGTGGTGGTGGTGGA
TSA: Allium cepa CUDHLF2_15267 mRNA sequence.
JR858085.1:283-302
TGCGATGTTAAGGTTGGAAGTTTCGATATA283TCTACAAGGAAGGAGTTGGCACCTTGTATTTATTTTACCAGACAACGCAT
Sepioteuthis lessoniana genome assembly, chromosome: 5.
OY757908.1:106346478-106346497
TCGACTATGGTCAGCCAACTTTACTGGTCT106346478TCTACAAGGAAGGAGTTGGCATAAATGTTCAAATTCTAGTCATGATTTTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCAACTCCTTCCTTGTAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCAACTCCTTCCTTGTAGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=GCCAACTCCTTCCTTGTAGA&k=0&no_gap=0&offset=0&limit=50
0.147 | 0.044 | search_minus_done; http://172.18.8.135:50400/match?q=TCTACAAGGAAGGAGTTGGC&k=0&no_gap=0&offset=0&limit=45
0.150 | 0.003 | cgi_end;

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