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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-26 07:15:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

MAG: Deltaproteobacteria bacterium isolate bin79 chromosome.
CP070660.1:1612168-1612187
AACGCTCCAGTTCCCACTCCACACGTTTCC1612168GCCACAAGCTCAAAGACCTCTTATTGCTTTTTGTCAAGGTTTATATCCCA
Vigna angularis mRNA, clone: VES04C03.
HX943640.1:227-246
ATCCCCCGCCCCTCCCTGAGGCCCGCGTCC227GCCACAAGCTCAAAGACCTCTTCGTCTCCTCACCTCCGCCACCCCTTAAC
Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
AP015038.1:20635702-20635721
GCCGCAAGACCCTCCCCGAGGCTCGCGTCC20635702GCCACAAGCTCAAAGACCTCTTCGTCTCCTCACCTCCACCACCCCTTAAC
Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
AP015039.1:19991485-19991504
ATCCCCCGCCCCTCCCCGAGGCCCGCGTCC19991485GCCACAAGCTCAAAGACCTCTTCGTCTCCTCACCTCCGCCACCCCTTAAC
Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
AP015044.1:26259771-26259790
ATCCCGCGCCCCTCCCCGAGGCCCGCGTCC26259771GCCACAAGCTCAAAGACCTCTTCGTCTCCTCACCTCCGCCACCCCTTAAC
Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
AP015044.1:34591792-34591811
ATCCCGCGCCCCTCCCCGAGGCCCGCGTCC34591792GCCACAAGCTCAAAGACCTCTTCGTCTCCTCACCTCCGCCACCCCTTAAC
Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
AP015035.1:39781780-39781799
GTTAAGGGGTGGCGGAGGTGAGGAGACGAA39781780GAGGTCTTTGAGCTTGTGGCGGACGCGGGCCTCGGGGAGGGGCGGGGGAT
Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
AP015037.1:788974-788993
GTTAAGGGGTGGCGGAGGTGAGGAGACGAA788974GAGGTCTTTGAGCTTGTGGCGGACGCGGGCCTCAGGGAGGGGCGGGGGAT
Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
AP015037.1:8298998-8299017
GTTAAAGGGTGGCGGAGGTGAGGAGACGAA8298998GAGGTCTTTGAGCTTGTGGCGGACGCGGGCCTCGGGGAGGGGCGCGGGAT
Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
AP015039.1:11621659-11621678
GTTAAGGGGTGGAGGAGGTGAGGAGACGAA11621659GAGGTCTTTGAGCTTGTGGCGGACGCGGGCCTCGGGGAGGGGCGGGGGAT
Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
AP015039.1:27437359-27437378
GTTAAGGGGTGGCGGAGGTGAGGAGACGAA27437359GAGGTCTTTGAGCTTGTGGCGGACGCGGGCCTCGGGGAGGGGCGGGGGAT
Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
AP015041.1:44339730-44339749
GTTAAGGGGTGGCGGAGGTGAGGAGACGAA44339730GAGGTCTTTGAGCTTGTGGCGGACGCGGGCCTTGGGGAGGGGCGGGGGAT
Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
AP015043.1:4282162-4282181
GTTAAGGGGTGGCGGAGGTGAGGAGACGAA4282162GAGGTCTTTGAGCTTGTGGCGGACGCGGGCCTCGGGGAGGGGCGCGGGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCACAAGCTCAAAGACCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCACAAGCTCAAAGACCTC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.217 | 0.208 | search_plus_done; http://172.18.8.135:50400/match?q=GCCACAAGCTCAAAGACCTC&k=0&no_gap=0&offset=0&limit=50
0.238 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=GAGGTCTTTGAGCTTGTGGC&k=0&no_gap=0&offset=0&limit=44
0.242 | 0.005 | cgi_end;

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