GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-19 03:04:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arabidopsis thaliana cDNA clone:APD20c07F, 3' end.
AV518439.1:338-357
CCGATCGGTTGCCTCTCCGGAAACTTGTTA338GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
EX2PLCL3_UP_001_H11_26March2003_041 Brassica napus EX2PLCL3 Brassica napus cDNA 5', mRNA sequence.
EE503104.1:364-383
CCGATCGGCTGTCTCTCCGGAAACTTGTTA364GCTCCGACTCTAACATCTTCTTCTTTGCCTTCCATCTCCG
AYAKD96TRC pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG445248.1:24-43
GTTGCCTCTCCGGAAACTTGTTA24GCTCCGACTCTAACATCTTCTTCTTTACCTTACATCTCTCTCTCTCTTTC
AYAMN20TR pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG477232.1:415-434
CCGATCGGTTGCCTCTCCGGAAACTTGTTA415GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
AYBKG95TR pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG490031.1:319-338
CCGATCGGTTGCCTCTCCGGAAACTTGTTA319GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
AYBKO51TR pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG498850.1:209-228
CCGATCGGTTGCCTCTCCGGAAACTTGTTA209GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
AYBDD76TR pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG512885.1:572-591
CCGATCGGTTGCCTCTCCGGAAACTTGTTA572GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
AYBDD86TR pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG512926.1:93-112
CCGATCGGTTGCCTCTCCGGAAACTTGTTA93GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
AYBDD90TR pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG512938.1:93-112
CCGATCGGTTGCCTCTCCGGAAACTTGTTA93GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
AYBDD91TR pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG512940.1:91-110
CCGATCGGTTGCCTCTCCGGAAACTTGTTA91GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
AYBKI59TR pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG527740.1:434-453
CCGATCGGTTGCCTCTCCGGAAACTTGTTA434GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
AYBKI65TR pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG527747.1:434-453
CCGATCGGTTGCCTCTCCGGAAACTTGTTA434GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
EBENXNS01C2VB6 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EH799974.1:54-73
CCGATCGGTTGCCTCTCCGGAAACTTGTTA54GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
EBENXNS01CVP2Z 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EH816318.1:65-84
CCGATCGGTTGCCTCTCCGGAAACTTGTTA65GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCT
EBENXNS01AE03U 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EH822284.1:50-69
CCGATCGGTTGCCTCTCCGGAAACTTGTTA50GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
EBENXNS01BTO7X 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EH885759.1:87-106
CCGATCGGTTGCCTCTCCGGAAACTTGTTA87GCTCCGACTCTAACATCTTCTTCTTTA
EBENXNS02HSCWS 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EH950258.1:80-99
CCGATCGGTTGCCTCTCCGGAAACTTGTTA80GCTCCGACTCTAACATCTTCTTCTTTACCTT
EBENXNS02HSZBM 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EH973368.1:50-69
CCGATCGGTTGCCTCTCCGGAAACTTGTTA50GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
EBENXNS02GTT7H 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EH984195.1:76-95
CCGATCGGTTGCCTCTCCGGAAACTTGTTA76GCTCCGACTCTAACATCTTCTTCTTTACCTTCCAT
EBENXNS02GHUUX 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EL067235.1:65-84
CCGATCGGTTGCCTCTCCGGAAACTTGTTA65GCTCCGACTCTAACATCTTCTT
EB3RODY01EA6EY 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EL084940.1:63-82
CCGATCGGTTGCCTCTCCGGAAACTTGTTA63GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCT
EB3RODY01DTM3K 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EL085536.1:3-22
TA3GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
EB3RODY01CDACO 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EL100822.1:54-73
CCGATCGGTTGCCTCTCCGGAAACTTGTTA54GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
EB3RODY01AZHNH 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EL137298.1:87-106
CCGATCGGTTGCCTCTCCGGAAACTTGTTA87GCTCCGACTCTAACATCTTCTT
EB3RODY01AYYJ2 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EL165001.1:29-48
GATCGGTTGCCTCTCCGGAAACTTGTTA29GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTTTCTC
EB3RODY02IEL84 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EL210282.1:77-96
CCGATCGGTTGCCTCTCCGGAAACTTGTTA77GCTCCGACTCTAACATCTTCTTCTTTACCTTCCA
EB3RODY02JSTSS 8-day Arabidopsis seedlings, aerial tissues Arabidopsis thaliana cDNA, mRNA sequence.
EL210430.1:34-53
CCGATCGGTTGCCTCTCCGGAAACTTGTTA34GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
082090_2090_2749 Arabidopsis ovule high throughput cDNA library Arabidopsis thaliana cDNA, mRNA sequence.
ES049610.1:48-67
CCGATCGGTTGCCTCTCCGGAAACTTGTTA48GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTCT
086037_3852_3342 Arabidopsis ovule high throughput cDNA library Arabidopsis thaliana cDNA, mRNA sequence.
ES054096.1:31-50
CCGATCGGTTGCCTCTCCGGAAACTTGTTA31GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
2582 Lambda-PRL2 Arabidopsis thaliana cDNA clone 88F16T7, mRNA sequence.
T20574.1:241-260
CCGATCGGTTGCCTCTCCGGAAACTTGTTA241GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
2692 Lambda-PRL2 Arabidopsis thaliana cDNA clone 91E16T7, mRNA sequence.
T20684.1:280-299
CCGATCGGTTGCCTCTCCGGAAACTTGTTA280GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTCTC
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_6365.
FX746957.1:1039-1058
CCGATGGGTTGTCTCTCGGGGAATTTGTTG1039GCTCCGACTCTAACATCTTCTTCCTTGCCCTCCATCTCTTGAGTTTCTTC
TSA: Raphanus sativus RS03646 mRNA sequence.
JT788193.1:977-996
CCGATCGGTTGTCTCTCCGGAAACTTGTTG977GCTCCGACTCTAACATCTTCTTCTTTGCCTTCCATCTCCAGACGTCTCTT
TSA: Raphanus sativus RS03647 mRNA sequence.
JT788194.1:977-996
CCGATCGGTTGTCTCTCCGGAAACTTGTTG977GCTCCGACTCTAACATCTTCTTCTTTGCCTTCCATCTCCAGACGTCTCTT
TSA: Chorispora bungeana CK_16430 mRNA sequence.
KA004497.1:254-273
CCGATCGGTTGCCTCTCCGGAAACTTGTTA254GCTCCGACTCTAACATCTTCTTCTTTGCCTTCCATCTCCAAAACCTCTCT
Arabidopsis thaliana T-DNA flanking sequence GK-045C10-021167-DU03.
LN491841.1:30-49
CGATCGGTTGCCTCTCCGGAAACTTGTTA30GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
Arabidopsis thaliana T-DNA flanking sequence GK-694C03-113872-23kk.
LN504910.1:93-112
CCGATCGGTTGCCTCTCCGGAAACTTGTTA93GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH123K18, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC189622.1:114894-114913
CCGATGGGTTGTCTCTCCGGAAACTTGTTA114894GCTCCGACTCTAACATCTTCTTCCTTGCCTTCCATCTCCAAGTCCTTTCT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH081F04, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC241148.1:101535-101554
CCGATGGGTTGTCTCTCGGGGAATTTGTTG101535GCTCCGACTCTAACATCTTCTTCCTTGCCCTCCATCTCTTGAGTTTCTTC
Arabidopsis thaliana chromosome 2 clone F4I18 map CIC02E07, complete sequence.
AC004665.3:16433-16452
CCGATCGGTTGCCTCTCCGGAAACTTGTTA16433GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTCTCTCTCTTTC
Camelina hispida cultivar hispida voucher DAO 902780 chromosome 4.
CP094634.1:1377100-1377119
CCGATCGGTTGCCTCTCCGGAAACTTGTTA1377100GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTTTCTCTCTCTCTC
Brassica napus cultivar Xiang5A chromosome 18.
CP123893.1:62751024-62751043
CCGATGGGTTGTCTCTCGGGGAATTTGTTA62751024GCTCCGACTCTAACATCTTCTTCCTTGCCTTCCATCTCTTGAGTTTCTTC
Camelina sativa cultivar CO46 chromosome 5.
CP131554.1:942707-942726
CCGATTGGTTGCCTCTCCGGAAACTTGTTT942707GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTTTCTCTTTCTC
Raphanus sativus genome assembly, chromosome: 2.
LR778311.1:7653961-7653980
CCGATGGGTTGTCTCTCCGGAAACTTGTTA7653961GCTCCGACTCTAACATCTTCTTCCTTGCCTTCCATTTCTCTCTCTTAAGA
Thlaspi arvense genome assembly, chromosome: 4.
OU466860.2:938957-938976
CCGATCGGTTGTCTCTCCGGAAATTTGTTA938957GCTCCGACTCTAACATCTTCTTCCTTGCCTTCCATCTCCGACTTCTCTCT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX461151.1:21984886-21984905
CCGATCGGTTGCCTCTCCGGAAACTTGTTA21984886GCTCCGACTCTAACATCTTCTTCTTTACCTTCCATCTCTTTCTCTCTTTC
Raphanus sativus genome assembly, chromosome: 3.
OY743209.1:20519409-20519428
CCGATGGGTTGTCTCTCGGGGAATTTGTTA20519409GCTCCGACTCTAACATCTTCTTCCTTGCCTTCCATCTCTTTAAGTTTTCT
Cardamine flexuosa genome assembly, chromosome: 4.
OY743217.1:848292-848311
CCGATCGGTTGTCTCTCCGGAAACTTGTTA848292GCTCCGACTCTAACATCTTCTTCTTTGCCTTCCATCTCCGATCTAACTCT
Draba incana genome assembly, chromosome: 1.
OY755202.1:1878419-1878438
CCGATCGGTTGTCTCTCCGGAAATTTGTTA1878419GCTCCGACTCTAACATCTTCTTCTTTGCCTTCCATGGCTTTCTCTTCTTT
Draba incana genome assembly, chromosome: 3.
OY755204.1:1620697-1620716
CCGATCGGTTGCCTCTCCGGAAACTTGTTA1620697GCTCCGACTCTAACATCTTCTTCTTTGCCTTCCATGGCTTTCTCTTCTTT
Barbarea vulgaris genome assembly, chromosome: 6.
OY763892.1:937448-937467
CCGATCGGTTGTCTCTCCGGGAACTTGTTA937448GCTCCGACTCTAACATCTTCTTCTTTGCCTTCCATCTCCGATCTTTCTCT
Lepidium didymum genome assembly, chromosome: 1.
OY986991.1:904862-904881
CCGATCGGTTGCCTCTCCGGAAACTTGTTA904862GCTCCGACTCTAACATCTTCTTCTTTCCCATCCATCTCCAACTTCTCTCT
Cardamine chenopodiifolia genome assembly, chromosome: 4.
OZ000462.1:657734-657753
CCGATGGGTTGTCTCTCCGGAAACTTGTTA657734GCTCCGACTCTAACATCTTCTTCTTTGCCTTCCATCTCCGATCTATCTCT
Cardamine chenopodiifolia genome assembly, chromosome: 12.
OZ000470.1:887714-887733
CCGATGGGTTGTCTCTCCGGAAACTTGTTA887714GCTCCGACTCTAACATCTTCTTCTTTGCCGTCCATCTCCGATCTCTCTCT
Catocala fraxini genome assembly, chromosome: 1.
OV884025.1:10654819-10654838
TGTGGGTTTGTTACCCTTATCTCTGCCTAC10654819GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala fraxini genome assembly, chromosome: 4.
OV884028.1:344242-344261
TGTGGGTTTGTTACCCTTATCTCTGCCTAC344242GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala fraxini genome assembly, chromosome: 4.
OV884028.1:13285778-13285797
TGTGGGTTTGTTACCCTTATCTCTGCCTAC13285778GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala fraxini genome assembly, chromosome: 10.
OV884034.1:4385977-4385996
TGTGGGTTTGTTACCCTTATCTCTGCCTAC4385977GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala fraxini genome assembly, chromosome: 25.
OV884049.1:17708377-17708396
TGTGGGTTTGTTACCCTTATCTCTGCCTAC17708377GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Pseudoips prasinana genome assembly, chromosome: 2.
OX621236.1:21689879-21689898
TGCGGTTTCGTGACTTTTATTTCAGCCTAC21689879GCTCCGACTCTAACATCTTCGGATGAGTCAAAAGACCGTTTTTATTACAA
Pseudoips prasinana genome assembly, chromosome: 3.
OX621237.1:20152866-20152885
TGCGGTTTCGTGACTTTTACTTCAGCCTAC20152866GCTCCGACTCTAACATCTTCGGATGAGTCAAAAGACCGTTTTTATAACAA
Pseudoips prasinana genome assembly, chromosome: 8.
OX621242.1:22545322-22545341
TGCGGTTTCCTGACTTTTATTTCAGCCTAC22545322GCTCCGACTCTAACATCTTCGGATGAGTCAAAAGACCGTTTTTATAACAA
Pseudoips prasinana genome assembly, chromosome: 26.
OX621260.1:22165223-22165242
TGCGGTTTCGTGACTTTTATTTCAGCCTAC22165223GCTCCGACTCTAACATCTTCGGATGAGTCAAAAACCGTTTTTATAACAAC
Pseudoips prasinana genome assembly, chromosome: 31.
OX621265.1:16771861-16771880
TGCGGTTTCGTGACTTTTATTTCAGCCTGC16771861GCTCCGACTCTAACATCTTCGGATGAGTCAAAAGACCGTTTTTATAACAA
Catocala nupta genome assembly, chromosome: 4.
OY776082.1:7014228-7014247
TGTGGGTTTGTTTCCCTTATCTCTGCCTAC7014228GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala nupta genome assembly, chromosome: 4.
OY776082.1:7441262-7441281
TGTGGGTTTGTTCCCCTTATCTCTGCCTAC7441262GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala nupta genome assembly, chromosome: 4.
OY776082.1:9905207-9905226
TGTGGGTTTGTTCCCCTTATCTCTGCCTAC9905207GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala nupta genome assembly, chromosome: 8.
OY776086.1:9296292-9296311
TGTGGGTTTGTTTCCCTTATCTCTGCCGAC9296292GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala nupta genome assembly, chromosome: 9.
OY776087.1:14825637-14825656
TGTGGGTTTGTTTCCCTTATCTCTGCCTAC14825637GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala nupta genome assembly, chromosome: 15.
OY776093.1:30295439-30295458
TGTGGGTTTGTTTCCCTTATCTCTGCCTAC30295439GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala nupta genome assembly, chromosome: 16.
OY776094.1:4556926-4556945
TGTGGGTTTGTTTCCCTTATCTCTGCCTAC4556926GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala nupta genome assembly, chromosome: 16.
OY776094.1:24647312-24647331
TGTGGGTTTGTTTCCCTTATCTCTGCCTAC24647312GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala nupta genome assembly, chromosome: 20.
OY776098.1:8348756-8348775
TGTGGGTTTGTTTCCCTTATCTCTGCCTAC8348756GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala nupta genome assembly, chromosome: 21.
OY776099.1:7745315-7745334
TGTGGGTTTGTTTCCCTTATCTCTGCCTAC7745315GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala nupta genome assembly, chromosome: 21.
OY776099.1:13228463-13228482
TGTGGGTTTGTTTCCCTTATCTCTGCCTAC13228463GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala nupta genome assembly, chromosome: 22.
OY776100.1:21442866-21442885
TGTGGGTTTGTTTCCCTTATCTCTGCCTAC21442866GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA
Catocala nupta genome assembly, chromosome: 24.
OY776102.1:12782969-12782988
TGTGGGTTTGTTTCCCTTATCTCTGCCTAC12782969GCTCCGACTCTAACATCTTCGGACGAGTCTAAAGATCGTTTTTACATTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTCCGACTCTAACATCTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTCCGACTCTAACATCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.106 | 2.097 | search_plus_done; http://172.18.8.135:50400/match?q=GCTCCGACTCTAACATCTTC&k=0&no_gap=0&offset=0&limit=50
2.175 | 0.069 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGATGTTAGAGTCGGAGC&k=0&no_gap=0&offset=0&limit=0
2.175 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).