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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 07:58:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gymnoscopelus microlampas genome assembly, chromosome: 19.
OY732721.1:24441410-24441429
TCTCACCAACTCACTTTCTTCCATGGCATG24441410GCTCCTCCTCCTCAGAGATAAGTAAATGATAATGGGACAATGAGTGTACT
39RDBRT_UP_046_H06_22JUL2004_034 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
CX272860.1:2-21
G2GCTCCTCCTCCTCAGAGATAAGGTGGTGTTGTGTGTGTGTGTCATCATTC
BR070352 pistil cDNA library KCOV Brassica rapa subsp. pekinensis cDNA clone KCOV-13D02 5', mRNA sequence.
EX115653.1:2-21
G2GCTCCTCCTCCTCAGAGATAAGGTGGTGGTGTGTGTGTGTGTCATCATTC
BR070368 pistil cDNA library KCOV Brassica rapa subsp. pekinensis cDNA clone KCOV-13F02 5', mRNA sequence.
EX115669.1:2-21
G2GCTCCTCCTCCTCAGAGATAAGGTGGTGGTGTGTGTGTGTGTCATCATTC
BR070773 pistil cDNA library KCOW Brassica rapa subsp. pekinensis cDNA clone KCOW-01D02 5', mRNA sequence.
EX116074.1:2-21
G2GCTCCTCCTCCTCAGAGATAAGGTGGTGGTGTGTGTGTGTGTCATCATTC
BR070789 pistil cDNA library KCOW Brassica rapa subsp. pekinensis cDNA clone KCOW-01F02 5', mRNA sequence.
EX116090.1:2-21
G2GCTCCTCCTCCTCAGAGATAAGGTGGTGGTGTGTGTGTGTGTCATCATTC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB091M07, complete sequence.
AC189521.2:57898-57917
ATAAATCCAAAAGAGAGAGAGAGTGAGGTT57898GCTCCTCCTCCTCAGAGATAAGGTGGTGGTGTGTGTGTGTGTCATCATTC
uw27d11.y1 Soares_thymus_2NbMT Mus musculus cDNA clone IMAGE:3417909 5' similar to gb:X86694 M.musculus mRNA for astrocytic phosphoprotein, PEA-15 (MOUSE), mRNA sequence.
BE847498.1:369-388
GGTGGAGGACTACAAAATCCTTGAGCTGGA369TATCTCTGAGGAGGAGGAGCTGGTCAC
Brassica rapa genome, scaffold: A01.
LR031571.1:115804-115823
GAATGATGACACACACACACACCACCACCT115804TATCTCTGAGGAGGAGGAGCAACCTCACTCTCTCTCTCTCTTTTGGATTT
Aegilops longissima genome assembly, chromosome: 2S.
LR881070.1:392249606-392249625
GAAAAGCGCTACCGGGGTCCTCCAAAGATG392249606TATCTCTGAGGAGGAGGAGCGACAGCTACTGGCTGAGATTCATGCCGGTC
Brassica rapa genome assembly, chromosome: A01.
LS974617.2:115674-115693
GAATGATGACACACACACACACCACCACCT115674TATCTCTGAGGAGGAGGAGCAACCTCACTCTCTCTCTCTCTTTTGGATTT
Aegilops speltoides subsp. speltoides genome assembly, chromosome: 7B.
OX082603.1:544501539-544501558
GAAAAGCGCCACCGGAGTCCGTCAAAGGTG544501539TATCTCTGAGGAGGAGGAGCGGCAGCTCCTGGCTGAGATTCATGCCGGTC
Parasteatoda lunata genome assembly, chromosome: 2.
OX421971.1:128794329-128794348
TAAAGTGGCCTCGAGTCAGGCCACTCCAGA128794329TATCTCTGAGGAGGAGGAGCTGCTTTCCAGGCTCTCACAGTACACGGAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTCCTCCTCCTCAGAGATA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTCCTCCTCCTCAGAGATA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.351 | 0.342 | search_plus_done; http://172.18.8.135:50400/match?q=GCTCCTCCTCCTCAGAGATA&k=0&no_gap=0&offset=0&limit=50
0.391 | 0.040 | search_minus_done; http://172.18.8.135:50400/match?q=TATCTCTGAGGAGGAGGAGC&k=0&no_gap=0&offset=0&limit=43
0.394 | 0.004 | cgi_end;

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