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2025-04-07 21:59:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

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196 Loblolly pine C Pinus taeda cDNA clone 5c4g, mRNA sequence.
AA556341.1:109-128
ACNAAGCAGGTCAATAGGATTCTCGTTGTG109GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
1131 PtIFG2 Pinus taeda cDNA clone 9175r, mRNA sequence.
AI725265.1:57-76
ACGAAGCAGGTCAATAGGATTCTCGTTGTG57GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
23F8 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence.
AI813163.1:42-61
ACGAAGCAGGTCAATAGGATTCTCGTTGTG42GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
Pinus pinaster root EST, clone RS01B04 similar to CHITINASE.
AL750857.1:49-68
ACGAAGCAGATCAATAGGATTCTCGTTGTG49GCTGGTATTTGTTTAATGATGTCATCATGGTTTCGCTGTATCGAAGCTGC
Pinus pinaster root EST, clone RS01D04 similar to CHITINASE.
AL750877.1:49-68
ACGAAGCAGATCAATAGGATTCTCGTTGTG49GCTGGTATTTGTTTAATGATGTCATCATGGTTTCGCTGTATCGAAGCTGC
Pinus pinaster root EST, clone RS01G04 similar to CHITINASE.
AL750904.1:49-68
ACGAAGCAGATCAATAGGATTCTCGTTGTG49GCTGGTATTTGTTTAATGATGTCATCATGGTTTCGCTGTATCGAAGCTGC
ST51E01 Pine TriplEx shoot tip library Pinus taeda cDNA clone ST51E01, mRNA sequence.
AW056547.1:131-150
ACGAAGCAGGTCAATAGGATTCTCGTTGTG131GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXNV060B07F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone NXNV060B07 5', mRNA sequence.
AW461250.1:73-92
ACGAAGCAGGTCAATAGGATTCTCGTTGTG73GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGNCNN
NXNV_134_B06_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone NXNV_134_B06 5', mRNA sequence.
AW985338.1:73-92
ACGAAGCAGGTCAATAGGATTCTCGTTGTG73GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCCGC
NXCI_007_D04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_007_D04 5', mRNA sequence.
BE452011.1:325-344
ANNAAGCAGGTCAATAGGATTCTCGTTGTG325GCTGGTATTTGTTTAATGATGTCATCATGNNNTTGCTGTATCGNNNNTGC
NXCI_019_H10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_019_H10 5', mRNA sequence.
BE496363.1:73-92
ACGAAGCAGGTCAATAGGATTCTCGTTGTG73GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_023_C10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_023_C10 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/t
BE582162.1:19-38
AATAGGATTCTCGTTGTG19GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_043_E02_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_043_E02 5' similar to Arabidopsis thaliana sequence At3g16920 basic chitinase, putative see http://mips.gsf.de/pro
BE643710.1:31-50
ACGAAGCAGGTCAATAGGATTCTCGTTGTG31GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_048_H06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_048_H06 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/t
BE643909.1:19-38
AATAGGATTCTCGTTGTG19GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_058_C08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_058_C08 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/t
BE656930.1:19-38
AATAGGATTCTCGTTGTG19GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_069_D01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_069_D01 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/t
BE758631.1:102-121
ACGAAGCAGGTCAATAGGATTCTCGTTGTG102GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_075_H03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_075_H03 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/t
BE762004.1:74-93
ACGAAGCAGGTCAATAGGATTCTCGTTGTG74GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_083_F12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_083_F12 5' similar to Arabidopsis thaliana sequence At3g16920 basic chitinase, putative see http://mips.gsf.de/pro
BE762225.1:104-123
ACGAAGCAGGTCAATAGGATTCTCGTTGTG104GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_102_F08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_102_F08 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/t
BE996939.1:22-41
GTCAATAGGATTCTCGTTGTG22GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_085_E11_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_085_E11 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/t
BF010535.1:101-120
ACGAAGCAGGTCAATAGGATTCTCGTTGTG101GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_094_B11_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_094_B11 5' similar to Arabidopsis thaliana sequence At3g16920 basic chitinase, putative see http://mips.gsf.de/pro
BF010882.1:19-38
AATAGGATTCTCGTTGTG19GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_132_A01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_132_A01 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/t
BF186003.1:91-110
ACGAAGCAGGTCAATAGGATTCTCGTTGTG91GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_133_B06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_133_B06 5', mRNA sequence.
BF186133.1:116-135
ACGAAGCAGGTCAATNNNNTTCTCGTTGTG116GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_152_B12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_152_B12 5', mRNA sequence.
BF220622.1:22-41
GTCAATAGGATTCTCGTTGTG22GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_150_F03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_150_F03 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/t
BF220773.1:22-41
GTCAATAGGATTCTCGTTGTG22GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_155_B04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_155_B04 5' similar to Arabidopsis thaliana sequence At3g16920 basic chitinase, putative see http://mips.gsf.de/pro
BF220877.1:104-123
ACGAAGCAGGTCAATAGGATTCTCGTTGTG104GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_162_H04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_162_H04 5' similar to Arabidopsis thaliana sequence At3g16920 basic chitinase, putative see http://mips.gsf.de/pro
BF221065.1:19-38
AATAGGATTCTCGTTGTG19GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAACTGC
NXCI_156_C07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_156_C07 5' similar to Arabidopsis thaliana sequence At3g16920 basic chitinase, putative see http://mips.gsf.de/pro
BF221232.1:116-135
ACGAAGCAGGTCAATAGGATTCTCGTTGTG116GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXCI_156_D12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_156_D12 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/t
BF221245.1:19-38
AATAGGATTCTCGTTGTG19GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXSI_008_G09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_008_G09 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/thal/db/
BF517069.1:73-92
ACGAAGCAGGTCAATAGGATTCTCGTTGTG73GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXSI_028_F06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_028_F06 5' similar to Arabidopsis thaliana sequence At3g16920 basic chitinase, putative see http://mips.gsf.de/proj/thal/
BF517659.1:83-102
ACGAAGCAGGTCAATAGGATTCTCGTTGTG83GCTGGTATTTGTTTAATGATGTCATCATGGGTTTGCTGTATCGANNNTGC
NXSI_030_C04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_030_C04 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/thal/db/
BF518034.1:116-135
ACGAAGCAGGTCAATAGGATTCTCGTTGTG116GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXSI_058_G07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_058_G07 5' similar to Arabidopsis thaliana sequence At3g16920 basic chitinase, putative see http://mips.gsf.de/proj/thal/
BF610464.1:116-135
ACGAAGCAGGTCAATAGGATTCTCGTTGTG116GCTGGTATTTGTTTAATGATGTCNNNATGGTTTTGCTGTATNGAAACTGC
NXSI_066_H12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_066_H12 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/thal/db/
BF777250.1:99-118
ACGAAGCAGGTCAATAGGATTCTCGTTGTG99GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXSI_080_F07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_080_F07 5', mRNA sequence.
BF778306.1:69-88
ACGAAGCAGGTCAATAGGATTCTCGTTGTG69GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAACTGC
NXSI_088_H02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_088_H02 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/thal/db/
BF778627.1:53-72
ACGAAGCAGGTCAATAGGATTCTCGTTGTG53GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXSI_091_C09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_091_C09 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/thal/db/
BF778951.1:76-95
ACGAAGCAGGTCAATAGGATTCTCGTTGTG76GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXSI_115_E10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_115_E10 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/thal/db/
BG040824.1:28-47
AAGCAGGTCAATAGGATTCTCGTTGTG28GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXSI_142_E06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_142_E06 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/thal/db/
BG275330.1:22-41
GTCAATAGGATTCTCGTTGTG22GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXSI_148_E05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_148_E05 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/thal/db/
BG275841.1:116-135
ACGAAGCAGGTCAATAGGATTCTCGTTGTG116GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXPV_008_F08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_008_F08 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/thal
BG318007.1:116-135
ACGAAGCAGGTCAATAGGATTCTCGTTGTG116GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXPV_027_B12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_027_B12 5', mRNA sequence.
BG319369.1:116-135
ACCAAGCAAGTCAATAGGATTCTCGTTGTG116GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCTAAACTGT
NXRV_026_H08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV_026_H08 5', mRNA sequence.
BM492546.1:116-135
ACGAAGCAGGTCAATAGGATTCTCGTTGTG116GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXRV_033_G07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV_033_G07 5', mRNA sequence.
BM492909.1:90-109
ACGAAGCAGGTCAATAGGATTCTCGTTGTG90GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXRV_041_E03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV_041_E03 5', mRNA sequence.
BM903431.1:108-127
ACGAAGCAGGTCAATAGGATTCTCGTTGTG108GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXRV077_A06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV077_A06 5' similar to Arabidopsis thaliana sequence At3g16920 basic chitinase, putative see http://mips.gsf.de/proj/thal/db
BQ635100.1:113-132
ACGAAGCAGGTCAATAGGATTCTCGTTGTG113GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXRV099_F03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV099_F03 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/thal/db/in
BQ655811.1:113-132
ACGAAGCAGGTCAATAGGATTCTCGTTGTG113GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXPV_041_H02_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_041_H02 5' similar to Arabidopsis thaliana sequence At3g16920 basic chitinase, putative see http://mips.gsf.de/proj/t
BQ696488.1:116-135
ACGAAGCAGGTCAATAGGATTCTCGTTGTG116GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXPV_048_E07_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_048_E07 5' similar to Arabidopsis thaliana sequence At1g05850 putative endochitinase see http://mips.gsf.de/proj/thal
BQ697039.1:116-135
ACGAAGCAGGTCAATAGGATTCTCGTTGTG116GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
NXPV_054_F02_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_054_F02 5', mRNA sequence.
BQ697534.1:101-120
ACGAAGCAGGTCAATAGGATTCTCGTTGTG101GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
PtSIFG_1018 Pinus taeda cDNA libraries Pinus taeda STS cDNA clone NXPV_041_H02, sequence tagged site.
BV728673.1:116-135
ACGAAGCAGGTCAATAGGATTCTCGTTGTG116GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
PtSIFG_1051 Pinus taeda cDNA libraries Pinus taeda STS cDNA clone ST51E01, sequence tagged site.
BV728732.1:131-150
ACGAAGCAGGTCAATAGGATTCTCGTTGTG131GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
RPtest8 Pinus taeda cDNA libraries Pinus taeda STS cDNA clone 5c4g, sequence tagged site.
BV728799.1:109-128
ACNAAGCAGGTCAATAGGATTCTCGTTGTG109GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
SsrPt_BF778306 Pinus taeda cDNA libraries Pinus taeda STS cDNA clone NXSI_080_F07, sequence tagged site.
BV728805.1:69-88
ACGAAGCAGGTCAATAGGATTCTCGTTGTG69GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAACTGC
Pinus taeda clone PT_7Ba3966E14, complete sequence.
AC241340.1:11844-11863
ACGAAGCAGGTCAATAGGATTCTCGTTGTG11844GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
Pinus ponderosa clone PDLOP9 microsatellite sequence.
AY330160.1:15-34
GGATTCTCGTTGTG15GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
Pinus contorta clone PCLLOP9 microsatellite sequence.
AY330161.1:15-34
GGATTCTCGTTGTG15GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
Pinus sylvestris clone PSLOP9 microsatellite sequence.
AY330162.1:15-34
GGATTCTCGTTGTG15GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
Pinus taeda Chitinase-like protein 1 (GH19a) mRNA, complete cds.
MH017232.1:117-136
ACCAAGCAGGTCAATAGGATTCTCGTTGTG117GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
Pinus banksiana class II chitinase (Chia2_4) mRNA, complete cds.
MK521175.1:37-56
ACGAAGCAGGTCAATAGGATTCTCGTTGTG37GCTGGTATTTGTTTAATGATGTCATCATGGTTTTGCTGTATCGAAGCTGC
Lochmaea crataegi genome assembly, chromosome: 12.
OX387434.1:17913155-17913174
TCAATTAAATTTGGATCGTAGTTATTATTG17913155GCTGGTATTTGTTTAATGATATTTAGTTCTTTATTGTAATTAATTATGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTGGTATTTGTTTAATGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGGTATTTGTTTAATGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.501 | 0.493 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGGTATTTGTTTAATGAT&k=0&no_gap=0&offset=0&limit=50
0.559 | 0.057 | search_minus_done; http://172.18.8.135:50400/match?q=ATCATTAAACAAATACCAGC&k=0&no_gap=0&offset=0&limit=0
0.559 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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