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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 10:18:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EG_Ba023P16.F EG_Ba Eucalyptus grandis genomic 5', genomic survey sequence.
JM744592.1:379-397
CACGGTTGGCTTGAGGTATGGCGAGGAGCA379GCTGGTGGTTCGGTGATGGGTCGCCGTTCGGAACAAGGGCTGTCCGTCG
EG_Ba150A04.R EG_Ba Eucalyptus grandis genomic 3', genomic survey sequence.
JM754157.1:329-347
CACGGTTGACTTGAAGAATGGAGAGGAGCA329GCTGGTGGTTCGGTGATGGGTCGCCGTTCGAAACAGGGGTGGTCGTCGG
Trifolium repens isolate ACLI19 chromosome 01_Occ.
CP125836.1:24805479-24805497
GCTTCGGCCTTTGGTTCTTCTTTCTCCGAG24805479GCTGGTGGTTCGGTGATGGTTGGTTCGGGAACAGGTTCCACAACAACAG
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:25895250-25895268
GCTTCGGGCTTAGGTTCTTCTTTCTCCGAG25895250GCTGGTGGTTCGGTGATGGTTGGTTCGGGAACAGGTTCCACAACGACAA
Triticum aestivum genome assembly, chromosome: 3D.
LR862537.1:239198657-239198675
TGGGTGACTACCTGCTCGGTGAGGTGGATC239198657GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
LR862558.1:241374855-241374873
TGGGTGACTACCTGCTCGGTGAGGTGGATC241374855GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
LR865466.1:234874596-234874614
TGGGTGACTACCTGCTCGGTGAGGTGGATC234874596GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
LR865487.1:244523763-244523781
TGGGTGACTACCTGCTCGGTGAGGTGGATC244523763GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
LR865508.1:240546801-240546819
TGGGTGACTACCTGCTCGGTGAGGTGGATC240546801GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
LR865747.1:246745415-246745433
TGGGTGACTACCTGCTCGGTGAGGTGGATC246745415GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
LR865768.1:233614949-233614967
TGGGTGACTACCTGCTCGGTGAGGTGGATC233614949GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
LR877317.1:238655445-238655463
TGGGTGACTACCTGCTCGGTGAGGTGGATC238655445GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
LR878443.1:238026158-238026176
TGGGTGACTACCTGCTCGGTGAGGTGGATC238026158GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
LS992088.1:235587149-235587167
TGGGTGACTACCTGCTCGGTGAGGTGGATC235587149GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
OU015729.1:261418096-261418114
TGGGTGACTACCTGCTCGGTGAGGTGGATC261418096GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
OU343185.1:252147476-252147494
TGGGTGACTACCTGCTCGGTGAGGTGGATC252147476GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
OU963880.1:241520621-241520639
TGGGTGACTACCTGCTCGGTGAGGTGGATC241520621GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
OV100745.1:239231674-239231692
TGGGTGACTACCTGCTCGGTGAGGTGGATC239231674GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Triticum aestivum genome assembly, chromosome: 3D.
OW530318.1:239231674-239231692
TGGGTGACTACCTGCTCGGTGAGGTGGATC239231674GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:172598775-172598793
GGAGTGCGGTTGGTAGGTTGCCACGCGGTG172598775GCTGGTGGTTCGGTGATGGAGTGGATCGGCACTGGCGTCGTGACGAGAT
Triticum aestivum genome assembly, chromosome: 3D.
OX637233.1:185395832-185395850
TGGGTGACTACCTGCTCGGTGAGGTGGATC185395832GCTGGTGGTTCGGTGATGGCCTGCCGGGCTGAGTGCTTGCCAGGCCTTC
Hordeum bulbosum genome assembly, chromosome: 3H_1.
OY737462.1:303704119-303704137
TGGTGTGGCGCCGGTGACGATGGAGATCAT303704119GCTGGTGGTTCGGTGATGGAGATAGTGAAGCACGGAGTTCATGGCCATA
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737470.1:207827201-207827219
GGCACGGGCGATGACGGTGGTGGCTGCGAC207827201GCTGGTGGTTCGGTGATGGCCGTCTGGCACCGAGTGTTTGGGGCGCGCG
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737484.1:209261227-209261245
GGCACGGGCAATGACGGTGGTGGCTGCGAC209261227GCTGGTGGTTCGGTGATGGCCGTCTGGCACCGAGTGTTTGGGGCGCGCG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737499.1:170309485-170309503
GGCACGGGCAATGACGGTGGTGGCTGCGAC170309485GCTGGTGGTTCGGTGATGGCCGTCTGGCACCGAGTGTTTGGGGCGCGCG
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737506.1:169448767-169448785
GGCACGGGCAATGACGGTGGTGGCTGCGAC169448767GCTGGTGGTTCGGTGATGGCCGTCTGGCACCGAGTGTTTGGGGCGCGCG
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737528.1:202650140-202650158
GGCACGGGCGATGACGGTGGTGGCTGCGAC202650140GCTGGTGGTTCGGTGATGGCCGTCTGGCACCGAGTGTTTGGGGCGCGCG
Hordeum bulbosum genome assembly, chromosome: 3H_3.
OY737534.1:383910344-383910362
TGGTGTGACGCCGGTGACGATGAAGATCAT383910344GCTGGTGGTTCGGTGATGGAGATCGTGAAGCACGGAGTTCATGGCCATA
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737542.1:203364362-203364380
GGCACGGGCGATGACGGTGGTGGCTGCGAC203364362GCTGGTGGTTCGGTGATGGCCGTCTGGCACCGAGTGTTTGGGGCGCGCG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737643.1:176310259-176310277
GGCACGGGCAATGACGGTGGTGGCTGCGAC176310259GCTGGTGGTTCGGTGATGGCCGTCTGGCACCGAGTGTTTGGGGCGCGCG
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737883.1:212474526-212474544
GGCACGGGCAATGACGGTGGTGGCTGCGAC212474526GCTGGTGGTTCGGTGATGGCCGTCTGGCACCGAGTGTTTGGGGCGCGCG
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737890.1:210317732-210317750
GGCACGGGCAATGACGGTGGTGGCTGCGAC210317732GCTGGTGGTTCGGTGATGGCCGTCTGGCACCGAGTGTTTGGGGCGCGCG
Viola odorata genome assembly, chromosome: 7.
OY829543.1:57674581-57674599
TGATCGGAGGACGGAAATGGGTGGTTTGGT57674581GCTGGTGGTTCGGTGATGGGTGATCGGGCTGTGATTAGAATCGGGGTAT
Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence.
CP041205.1:383189-383207
CTCGCGGTAGAAAATTTCCACGCCTTCAAC383189GCTGGTGGTTCGGTGATGGGTGACGGGCCGGGTCATTGTCCGGCACCTT
Agrobacterium tumefaciens strain Sta004 plasmid pAt2, complete sequence.
CP048524.1:137753-137771
CTCGCGGTAGAAAATTTCCACGCCTTCAAC137753GCTGGTGGTTCGGTGATGGGTGACGGGCCGGGTCATTGTCCGGCACCTT
Agrobacterium tumefaciens strain But001 plasmid pAt1, complete sequence.
CP048595.1:205748-205766
CTCGCGGTAGAAAATTTCGACGCCTTCAAC205748GCTGGTGGTTCGGTGATGGGTGACGGGCCGGGTCATTGTCCGGCACCTT
Agrobacterium tumefaciens strain BIM B-441 plasmid pAt-B441, complete sequence.
CP072747.1:127806-127824
CTCGCGGTAGAAAATTTCCACGCCTTCAAC127806GCTGGTGGTTCGGTGATGGGTGACGGGCCGGGTCATTGTCCGGCACCTT
Agrobacterium fabacearum strain A47a plasmid pAtA47a_a, complete sequence.
CP116702.1:187045-187063
CTCGCGGTAGAAAATTTCGACGCCTTCAAC187045GCTGGTGGTTCGGTGATGGGTGACGGGCCGGGTCATTGTCCGGCACCTT
Agrobacterium fabacearum strain FPH-AT4 plasmid pAtFPH-AT4a, complete sequence.
CP116732.1:293347-293365
CTCGCGGTAGAAAATTTCCACGCCTTCAAC293347GCTGGTGGTTCGGTGATGGGTGACGGGCCGGGTCATTGTCCGGCACCTT
Vespula vulgaris genome assembly, chromosome: 3.
FR997670.1:9661192-9661210
GTGGTAGGTTTGTTGGCTGCTCTAAGGACG9661192GCTGGTGGTTCGGTGATGGTATTCGTGCTGGCTAAGCCTCTCATCATTG
Xanthogramma pedissequum genome assembly, chromosome: 1.
OU343160.1:281604345-281604363
GAGCTTAACATTTTGCCAACCATACAAAAT281604345GCTGGTGGTTCGGTGATGGTACGTACATATGGGGATGTATGCCGCATGC
Mythimna albipuncta genome assembly, chromosome: 2.
OV815960.1:8869734-8869752
ATAAATGAAACGGGTAACTTGGCTACGCCT8869734GCTGGTGGTTCGGTGATGGAACAGGTGGCGGCGGAATTAAGTTAGGTAT
Chorisops tibialis genome assembly, chromosome: 3.
OY770264.1:6228136-6228154
GATCAAAACACTGTATCGACAGTGAAACAC6228136GCTGGTGGTTCGGTGATGGTGTGAGGGTGTATGGCGGCAAATGTAGTTG
Xanthia togata genome assembly, chromosome: 22.
OY970810.1:14438542-14438560
ATTGTGCTGCTTGGAGGTTTGGTATGGCTG14438542GCTGGTGGTTCGGTGATGGTTTGGTGGTGGTAGGAAGTAATGACTGAGG
Raja brachyura genome assembly, chromosome: 18.
OY740798.1:21336613-21336631
TTCAAACTTTCCTCTTTGGTCTCACTCAGG21336613CCATCACCGAACCACCAGCGCAGCGGGACAGCTGCTTTGAGATTCCCCA
Trifolium repens mRNA, clone: WCC05e10_051, unspecified EST.
FY455804.1:70-88
TTGTCGTTGTGGAACCTGTTCCCGAACCAA70CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC07g18_091, unspecified EST.
FY456557.1:95-113
TTGTTGTTGTGGAACCTGTTCCCGAACCAA95CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC07j15_038, unspecified EST.
FY456620.1:92-110
TTGTTGTTGTGGAACCTGTTCCCGAACCAA92CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAAGCCGAAGC
Trifolium repens mRNA, clone: WCC10n09_040, unspecified EST.
FY457770.1:94-112
TTGTCGTTGTGGAACCTGTTCCCGAACCAA94CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC10n13_008, unspecified EST.
FY457774.1:108-126
TTGTCGTTGTGGAACCTGTTCCCGAACCAA108CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC10o06_095, unspecified EST.
FY457790.1:98-116
TTGTCGTTGTGGAACCTGTTCCCGAACCAA98CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
EG_Bb021M10.R EG_Bb Eucalyptus grandis genomic 3', genomic survey sequence.
JM506401.1:580-598
CCGACGACCATCCCGGTTCCGAACGGCGAC580CCATCACCGAACCACCAGCTGCTCCTCGCCATTCCTCAGGTCAACCGTG
EG_Ba115C11.F EG_Ba Eucalyptus grandis genomic 5', genomic survey sequence.
JM735371.1:540-558
CCGACGACCATCCCGGTTCCAAACGGCGAC540CCATCACCGAACCACCAGCTGCTCCTCGCCATTCCTCAGGTCAACCGTG
EG_Ba156B03.F EG_Ba Eucalyptus grandis genomic 5', genomic survey sequence.
JM737625.1:207-225
CCGACGACCATCCCGGTTCCAAACGGCGAC207CCATCACCGAACCACCAGCTGCTCCTCGCCATTCCTCAGGTCAACCGTG
EG_Ba031F08.R EG_Ba Eucalyptus grandis genomic 3', genomic survey sequence.
JM779734.1:515-533
CCGACGACCATCCCGGTTCCAAACGGCGAC515CCATCACCGAACCACCAGCTGCTCCTCGCCATTCCTCAGGTCAACCGTG
Trifolium repens isolate ACLI19 chromosome 01_Occ.
CP125836.1:24791334-24791352
TTGTTGTTGTGGAACCTGTTCCCGAACCAA24791334CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAGGCCGAAGC
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:25880853-25880871
TTGTCGTTGTGGAACCTGTTCCCGAACCAA25880853CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Triticum aestivum genome assembly, chromosome: 3D.
LR862516.1:227009703-227009721
GAAGGCCTGGCAAGCACTCAGCCCGGCAGG227009703CCATCACCGAACCACCAGCGATCCACCTCACCGAGCAGGTAGTCACCCA
Aegilops sharonensis genome assembly, chromosome: 3S.
LR880968.1:411866064-411866082
GAAGGCCTGGAAAGCACTCAGCCCGGCAGG411866064CCATCACCGAACCACCAGCGATCCACCTCACCGAGTAGGTAGTCACTCA
Aegilops longissima genome assembly, chromosome: 3S.
LR881071.1:389522930-389522948
GAAGGCCTGGAAAGCACTCAGCCCGGCAGG389522930CCATCACCGAACCACCAGCGATCCACCTCACCGAGTAGGTAGTCACTCA
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737380.1:220758439-220758457
CGCACGCCCCAAACACTCGGTGCCAGACGG220758439CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737387.1:220334084-220334102
CGCACGCCCCAAACACTCGGTGCCAGACGG220334084CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737395.1:211259039-211259057
CGCGCACCCCAAACACTCGGTGCCAGACGG211259039CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGCGCC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737402.1:201398261-201398279
CGCGCACCCCAAACACTCGGTGCCAGACGG201398261CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGCGCC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737412.1:214692691-214692709
CGCGCGCCCCAAACACTCGGTGCCAGACGG214692691CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737419.1:205926767-205926785
CGCGCGCCCCAAACACTCGGTGCCAGACGG205926767CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737477.1:212941821-212941839
CGTGCGCCCCAAACACTCGGTGCCAGACGG212941821CCATCACCGAACCACCAGCGTCTCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737501.1:396958014-396958032
TATGGCCATGAACTCCGTGCTTCACGATCT396958014CCATCACCGAACCACCAGCATGATCTTCATCGTCACCGGCGCCACACCA
Hordeum bulbosum genome assembly, chromosome: 5H_3.
OY737507.1:347379039-347379057
TATGGCCATGAACTCCGTGCTTCACGATCT347379039CCATCACCGAACCACCAGCATGATCTCCATCGTCACCGGCGCCACACCA
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737513.1:206416681-206416699
CGCGCGCCCCAAACACTCGGTGCCAGACGG206416681CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATTGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737513.1:207846353-207846371
CGCGCGCCCCAAACACTCGGTGCCAGACGG207846353CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATTGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737521.1:225196758-225196776
CGCCCGCCCCAAACACTCGGTGCCAGACGG225196758CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGTGCC
Agrobacterium tumefaciens strain Q15/94 plasmid pQ15_94_1, complete sequence.
CP049218.1:250437-250455
AAGGTGCCGGACAATGACCCGGCCCGTCAC250437CCATCACCGAACCACCAGCGTTGAAGGCGTGGAAATTTTCTACCGCGAG
Rhizobium hidalgonense strain JKLM 19E plasmid pPR19E01, complete sequence.
CP054028.1:1224506-1224524
AAGGTGCCGGACGGTGACCCGGCCCGTCAC1224506CCATCACCGAACCACCAGCGTTGAAGGCGTGGAAATATTCTACCGCGAG
Rhizobium indicum strain JKLM 13E plasmid pPR13E01, complete sequence.
CP054032.1:879105-879123
AAGGTGCCGGACAATGACCCGGCCCGTCAC879105CCATCACCGAACCACCAGCGTTGAAGGCGTGGAAATTTTCTACCGCGAG
Rhizobium leguminosarum strain OyaliB plasmid p1, complete sequence.
CP071400.1:508402-508420
AAGGTGCCGGACAATGACCCGGCCCGTCAC508402CCATCACCGAACCACCAGCGTTGAAGGAGTGGAAATTTTCTACCGCGAG
Vespula germanica genome assembly, chromosome: 3.
HG996530.1:5185044-5185062
CAATGATGAGAGGCTTAGCCAGCACGAATA5185044CCATCACCGAACCACCAGCCGTCCTTAGAGCAGCCAACAAACCTACCAC
Tenebrio molitor genome assembly, chromosome: 5.
OZ014542.1:2473113-2473131
TCCCCACAGAACACGTCTACATTCTCCCGG2473113CCATCACCGAACCACCAGCCGACATTCTGGTGGCCTTCAAGAAGGACGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTGGTGGTTCGGTGATGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTGGTGGTTCGGTGATGG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.203 | 0.195 | search_plus_done; http://172.18.8.135:50400/match?q=GCTGGTGGTTCGGTGATGG&k=0&no_gap=0&offset=0&limit=50
0.813 | 0.610 | search_minus_done; http://172.18.8.135:50400/match?q=CCATCACCGAACCACCAGC&k=0&no_gap=0&offset=0&limit=6
0.835 | 0.022 | cgi_end;

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