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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-08 18:11:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

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TSA: Eustoma exaltatum subsp. russellianum E_gra_lrc62579 mRNA sequence.
JT618162.1:48-67
GACTCCCAAGTCAAAATCATGGCTGCTTCT48GCTTCTTCTTCAATCTCTGCTGMTTTCAGAGCCATCTCTACATCCGTAAA
OB__Ba0017N08.f OB__Ba Oryza brachyantha genomic clone OB__Ba0017N08 5', genomic survey sequence.
CL560500.1:7-26
GCTGCT7GCTTCTTCTTCAATCTCTGCACACCTCCATCTCTCTGTCTCTGTCTCTTG
Lotus japonicus genomic DNA, chromosome 1, clone: LjT03H13, TM0012a.
AP004478.1:36491-36510
AAAGCTTATCGATGTCACTTCTCTGTTGAA36491GCTTCTTCTTCAATCTCTGCAACTCTTCAAATCAAACTCTCTCTCTCTCT
Escherichia coli O121:H19 51104 DNA, complete genome.
AP024471.1:3200866-3200885
TCCAGCGGGATATCCTGCGGTTCAAAACGC3200866GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli O121:H19 SE14002 DNA, complete genome.
AP024473.1:3210184-3210203
TCCAGCGGGATATCCTGCGGTTCAAAACGC3210184GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli O121:H19 CEC14159 DNA, complete genome.
AP024475.1:3158307-3158326
TCCAGCGGGATATCCTGCGGTTCAAAACGC3158307GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli O121:H19 E15042 DNA, complete genome.
AP024478.1:3165336-3165355
TCCAGCGGGATATCCTGCGGTTCAAAACGC3165336GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli EC581 DNA, complete genome.
AP027432.1:1967536-1967555
TCCAGCGGGATATCCTGCGGTTCAAAACGC1967536GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Shigella dysenteriae Sd197, complete genome.
CP000034.1:2631557-2631576
TCCAGCGGGATATCCTGCGGTTCAAAACGC2631557GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli PCN033, complete genome.
CP006632.1:2855016-2855035
TCCAGCGGGATATCCTGCGGTTCAAAACGC2855016GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Shigella dysenteriae 1617, complete genome.
CP006736.1:2585198-2585217
TCCAGCGGGATATCCTGCGGTTCAAAACGC2585198GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli O157:H16 strain Santai, complete genome.
CP007592.1:3098752-3098771
TCCAGCGGGATATCCTGCGGTTCAAAACGC3098752GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain C8, complete genome.
CP010125.1:3377600-3377619
TCCAGCGGGATATCCTGCGGTTCAAAACGC3377600GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain Combat11I9 chromosome, complete genome.
CP021726.1:2704062-2704081
TCCAGCGGGATATCCTGCGGTTCAAAACGC2704062GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain 14EC033 chromosome, complete genome.
CP024147.1:3497761-3497780
TCCAGCGGGATATCCTGCGGTTCAAAACGC3497761GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli O169:H41 strain 2014EL-1345-2 chromosome, complete genome.
CP024223.1:1030615-1030634
TCCAGCGGGATATCCTGCGGTTCAAAACGC1030615GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli O169:H41 strain F6326-C1 chromosome, complete genome.
CP024263.1:2231713-2231732
TCCAGCGGGATATCCTGCGGTTCAAAACGC2231713GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain F8111-1SC3 chromosome, complete genome.
CP024269.1:1487564-1487583
TCCAGCGGGATATCCTGCGGTTCAAAACGC1487564GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain F9792 chromosome, complete genome.
CP024273.1:2776414-2776433
TCCAGCGGGATATCCTGCGGTTCAAAACGC2776414GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Shigella dysenteriae strain BU53M1 chromosome, complete genome.
CP024466.1:2580377-2580396
TCCAGCGGGATATCCTGCGGTTCAAAACGC2580377GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Shigella dysenteriae strain 69-3818 chromosome, complete genome.
CP026777.1:438877-438896
TCCAGCGGGATATCCTGCGGTTCAAAACGC438877GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Shigella dysenteriae strain 53-3937 chromosome, complete genome.
CP026780.1:2469697-2469716
TCCAGCGGGATATCCTGCGGTTCAAAACGC2469697GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Shigella dysenteriae strain 08-3380 chromosome, complete genome.
CP026782.1:416911-416930
TCCAGCGGGATATCCTGCGGTTCAAAACGC416911GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain 2015C-3107 chromosome, complete genome.
CP027317.1:1725452-1725471
TCCAGCGGGATATCCTGCGGTTCAAAACGC1725452GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain 2014C-3655 chromosome, complete genome.
CP027351.1:4466078-4466097
TCCAGCGGGATATCCTGCGGTTCAAAACGC4466078GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain 2014C-3599 chromosome, complete genome.
CP027435.1:4101584-4101603
TCCAGCGGGATATCCTGCGGTTCAAAACGC4101584GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain 2014C-4423 chromosome, complete genome.
CP027454.1:4594494-4594513
TCCAGCGGGATATCCTGCGGTTCAAAACGC4594494GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain A16 chromosome, complete genome.
CP028758.1:3628010-3628029
TCCAGCGGGATATCCTGCGGTTCAAAACGC3628010GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Pantoea sp. CCBC3-3-1 chromosome, complete genome.
CP034363.1:3817768-3817787
TTTAGGGGGATGTCCTGGGCTTCCCAGCGA3817768GCTTCTTCTTCAATCTCTGCATCGATAGCGATTTGTTCGCCGCCAAGCAC
Escherichia coli strain RH-048-WU chromosome.
CP050207.1:3090509-3090528
TCCAGCGGGATATCCTGCGGTTCAAAACGC3090509GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain RM-065-CS chromosome.
CP050211.1:3112728-3112747
TCCAGCGGGATATCCTGCGGTTCAAAACGC3112728GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain SCU-102 chromosome, complete genome.
CP051753.1:3369604-3369623
TCCAGCGGGATATCCTGCGGTTCAAAACGC3369604GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Shigella dysenteriae strain SWHEFF_51 chromosome, complete genome.
CP055052.1:3551005-3551024
TCCAGCGGGATATCCTGCGGTTCAAAACGC3551005GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Shigella dysenteriae strain SWHEFF_49 chromosome, complete genome.
CP055055.1:3551005-3551024
TCCAGCGGGATATCCTGCGGTTCAAAACGC3551005GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Shigella dysenteriae strain SWHE2 chromosome, complete genome.
CP055063.1:4021485-4021504
TCCAGCGGGATATCCTGCGGTTCAAAACGC4021485GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain RHB31-C18 chromosome, complete genome.
CP057254.1:1967350-1967369
TCCAGCGGGATATCCTGCGGTTCAAAACGC1967350GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain RHB18-C12 chromosome, complete genome.
CP057673.1:1973118-1973137
TCCAGCGGGATATCCTGCGGTTCAAAACGC1973118GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli O139:H1 strain P15-25 chromosome, complete genome.
CP080233.1:3813471-3813490
TCCAGCGGGATATCCTGCGGTTCAAAACGC3813471GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli O139:H1 strain W13-16 chromosome, complete genome.
CP080235.1:1979627-1979646
TCCAGCGGGATATCCTGCGGTTCAAAACGC1979627GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain elppa4 chromosome, complete genome.
CP083512.1:1631716-1631735
TCCAGCGGGATATCCTGCGGTTCAAAACGC1631716GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain F17EC0190 chromosome, complete genome.
CP088348.1:3756649-3756668
TCCAGCGGGATATCCTGCGGTTCAAAACGC3756649GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain 623213 chromosome, complete genome.
CP091387.1:3692858-3692877
TCCAGCGGGATATCCTGCGGTTCAAAACGC3692858GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain 788309 chromosome, complete genome.
CP091391.1:3873142-3873161
TCCAGCGGGATATCCTGCGGTTCAAAACGC3873142GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain GN02461 chromosome, complete genome.
CP095533.1:4045455-4045474
TCCAGCGGGATATCCTGCGGTTCAAAACGC4045455GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain AHM8C160RI chromosome, complete genome.
CP104598.1:3370137-3370156
TCCAGCGGGATATCCTGCGGTTCAAAACGC3370137GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain AHM8C212RI chromosome, complete genome.
CP104613.1:3370137-3370156
TCCAGCGGGATATCCTGCGGTTCAAAACGC3370137GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain AHM21C2872I chromosome, complete genome.
CP104629.1:2485781-2485800
TCCAGCGGGATATCCTGCGGTTCAAAACGC2485781GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain MLI121 chromosome, complete genome.
CP117016.1:1587151-1587170
TCCAGCGGGATATCCTGCGGTTCAAAACGC1587151GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Shigella dysenteriae strain NCDC 599-52 chromosome, complete genome.
CP119450.1:3323724-3323743
TCCAGCGGGATATCCTGCGGTTCAAAACGC3323724GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain IVRI_FBI_605 chromosome.
CP126292.1:2848875-2848894
TCCAGCGGGATATCCTGCGGTTCAAAACGC2848875GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain TUM14771 chromosome, complete genome.
CP128875.1:1977902-1977921
TCCAGCGGGATATCCTGCGGTTCAAAACGC1977902GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain ES5 chromosome, complete genome.
CP133871.1:3782400-3782419
TCCAGCGGGATATCCTGCGGTTCAAAACGC3782400GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain TUM1226 chromosome, complete genome.
CP135719.1:2068535-2068554
TCCAGCGGGATATCCTGCGGTTCAAAACGC2068535GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain FHI48 genome assembly, scaffold: scaffold-34_contig-0.0_1_799263_[organism:Escherichia.
LM996051.1:4397-4416
TCCAGCGGGATATCCTGCGGTTCAAAACGC4397GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain FHI43 genome assembly, scaffold: scaffold-15_contig-2.0_1_800763_[organism:Escherichia.
LM996081.1:6576-6595
TCCAGCGGGATATCCTGCGGTTCAAAACGC6576GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain FHI92 genome assembly, scaffold: scaffold-18_contig-6.0_1_420424_[organism:Escherichia.
LM997166.1:4387-4406
TCCAGCGGGATATCCTGCGGTTCAAAACGC4387GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain FHI62 genome assembly, scaffold: scaffold-23_contig-0.0_1_800564_[organism:Escherichia.
LN554925.1:4365-4384
TCCAGCGGGATATCCTGCGGTTCAAAACGC4365GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Alteromonas sp. ATCC 43554 isolate Alteromonas fortis genome assembly, chromosome: ALFOR1.
LR812090.1:3152486-3152505
GAAATACCACGAGTAAGCATGTAGTATAGG3152486GCTTCTTCTTCAATCTCTGCCACCGTAGCACCATGAGCACATTTTACGTC
Escherichia coli strain B185 / O148:H10 / fimH562 / 3577 (ST Warwick) genome assembly, chromosome: 1.
OU349838.1:2682347-2682366
TCCAGCGGGATATCCTGCGGTTCAAAACGC2682347GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain B1878 / O130:H9 / fimH31 / 4978 (ST Warwick) genome assembly, chromosome: 1.
OU349841.1:4485864-4485883
TCCAGCGGGATATCCTGCGGTTCAAAACGC4485864GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain B1720 / O88:H7 / fimH1314 / 7536 (ST Warwick) genome assembly, chromosome: 1.
OU349843.1:5249642-5249661
TCCAGCGGGATATCCTGCGGTTCAAAACGC5249642GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli strain TA321 / Oneg:H31 / fimH31 / 6968 (ST Warwick) genome assembly, chromosome: 1.
OU349846.1:4662437-4662456
TCCAGCGGGATATCCTGCGGTTCAAAACGC4662437GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Escherichia coli isolate 68 genome assembly, chromosome: main.
OX030728.1:2028226-2028245
TCCAGCGGGATATCCTGCGGTTCAAAACGC2028226GCTTCTTCTTCAATCTCTGCGTTGATGGCAACCTGCTCGCCACCCAATAC
Philonthus spinipes genome assembly, chromosome: 1.
OY720299.1:29147606-29147625
TGTTACTTTGAGTGTTTATTAACATGATTC29147606GCTTCTTCTTCAATCTCTGCTAATAAGCAATATACCCTATGTTAACTTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCTTCTTCTTCAATCTCTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCTTCTTCTTCAATCTCTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.135 | 0.126 | search_plus_done; http://172.18.8.135:50400/match?q=GCTTCTTCTTCAATCTCTGC&k=0&no_gap=0&offset=0&limit=50
0.196 | 0.061 | search_minus_done; http://172.18.8.135:50400/match?q=GCAGAGATTGAAGAAGAAGC&k=0&no_gap=0&offset=0&limit=0
0.196 | 0.000 | cgi_end;

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