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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 21:34:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Cajanus cajan cultivar UPAS 120 contig07713.UPAS mRNA sequence.
EZ625430.1:235-254
GCATCAGCATCAGCATCAGCAGCAGCACAG235GGAACATTATCAAAGGGTGATGAAGACAATGGACGGTGGTGATGATTATG
TSA: Myrmica sulcinodis mRNA, contig: comp26034_c3_seq6.
LJ340245.1:339-358
TAATGATGCCTCCATTAGCCGCTCGGACGA339TCACCCTTTGATAATGTTCCTGCCGATCATTACATGAACATAAAACTTTC
TSA: Myrmica sulcinodis mRNA, contig: comp26034_c3_seq7.
LJ340246.1:339-358
TAATGATGCCTCCATTAGCCGCTCGGACGA339TCACCCTTTGATAATGTTCCTGCCGATCATTACATGAACATAAAACTTTC
TSA: Myrmica sulcinodis mRNA, contig: comp26034_c3_seq9.
LJ340248.1:339-358
TAATGATGCCTCCATTAGCCGCTCGGACGA339TCACCCTTTGATAATGTTCCTGCCGATCATTACATGAACATAAAACTTTC
TSA: Myrmica sulcinodis mRNA, contig: comp26034_c3_seq12.
LJ340251.1:339-358
TAATGATGCCTCCATTAGCCGCTCGGACGA339TCACCCTTTGATAATGTTCCTGCCGATCATTACATGAACATAAAACTTTC
TSA: Myrmica sulcinodis mRNA, contig: comp26034_c3_seq21.
LJ340260.1:339-358
TAATGATGCCTCCATTAGCCGCTCGGACGA339TCACCCTTTGATAATGTTCCTGCCGATCATTACATGAACATAAAACTTTC
TSA: Myrmica sulcinodis mRNA, contig: comp26034_c3_seq24.
LJ340263.1:339-358
TAATGATGCCTCCATTAGCCGCTCGGACGA339TCACCCTTTGATAATGTTCCTGCCGATCATTACATGAACATAAAACTTTC
Shargacucullia verbasci genome assembly, chromosome: 10.
OX387290.1:184007-184026
CCTCCTGCTCGCCACGCTGTTCCTGGTGCG184007TCACCCTTTGATAATGTTCCCCCGTACCGTTACGAGTACAGGACTTCACT
Euplagia quadripunctaria genome assembly, chromosome: 3.
OY982562.1:22175204-22175223
CAGCGACTGACAACGACGCGGCAGGTCCCT22175204TCACCCTTTGATAATGTTCCCCGTCGGGTCCGAGATTAGTGGAGCATCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGAACATTATCAAAGGGTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGAACATTATCAAAGGGTGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.095 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=GGAACATTATCAAAGGGTGA&k=0&no_gap=0&offset=0&limit=50
0.264 | 0.169 | search_minus_done; http://172.18.8.135:50400/match?q=TCACCCTTTGATAATGTTCC&k=0&no_gap=0&offset=0&limit=49
0.270 | 0.005 | cgi_end;

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