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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 07:59:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Onychomys torridus genome assembly, chromosome: 12.
LR877199.1:1362792-1362811
TTTATCTGACAGTGGAAACAGTATAGTATG1362792GGATCTGGGGATCAGTTTCACCCTTGTGCATGTGCATATCCGGTTTTTCC
Onychomys torridus genome assembly, chromosome: 12.
OX460893.1:1362792-1362811
TTTATCTGACAGTGGAAACAGTATAGTATG1362792GGATCTGGGGATCAGTTTCACCCTTGTGCATGTGCATATCCGGTTTTTCC
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2403135-2403154
TATAATGATTTCTGACTGCAAAATGACTGA2403135TGAAACTGATCCCCAGATCCTCAGTATGAGGATCCGAATAAGATCCTGTT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2490848-2490867
TACAATGATTTCTGGCTGCAAAATGACTAA2490848TGAAACTGATCCCCAGATCCTCGGTATGAGGATCCGAATAAGATCCTGTT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2422816-2422835
TATAATGATTTCTAAATGCAAAATGACTGA2422816TGAAACTGATCCCCAGATCCTCAGTATGAGGATCCGAATAAGATCCTGTT
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2558455-2558474
TATAATGATTTCTAACTGCAAAATTACTGA2558455TGAAACTGATCCCCAGATCCTGAGTATGAGGATCCGAATAAGATCCTGTT
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2550667-2550686
TATAATGATTTCTAACTGCAAAATTACTGA2550667TGAAACTGATCCCCAGATCCTGAGTATGAGGATCCGAATAAGATCCTGTT
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2641983-2642002
TATAATGATTTCTAACTGCAAAATTACTGA2641983TGAAACTGATCCCCAGATCCTGAGTATGAGGATCCGAATAAGATCCTGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGATCTGGGGATCAGTTTCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGATCTGGGGATCAGTTTCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.089 | 0.080 | search_plus_done; http://172.18.8.135:50400/match?q=GGATCTGGGGATCAGTTTCA&k=0&no_gap=0&offset=0&limit=50
0.104 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=TGAAACTGATCCCCAGATCC&k=0&no_gap=0&offset=0&limit=48
0.108 | 0.004 | cgi_end;

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