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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 15:20:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:38259472-38259491
CATATAAGGCTTACATGATCCACTCTCTTA38259472GGCTATGTGGGATGTTACAATCCACCCCCTTAGGGGCCCGACGTCCTTAT
Malus hybrid cultivar cultivar Flame chromosome 3.
CP141912.1:5920582-5920601
ACATATAAGGCTTACAGGATCCACTCCCCT5920582GGCTATGTGGGATGTTACAATCCACCCCCCTTACGGGTCCGACGTCCTCG
Malus hybrid cultivar cultivar Flame chromosome 6.
CP141915.1:17443845-17443864
CATATAAGGCTTACAAGATTCATTCCCATG17443845GGCTATGTGGGATGTTACAATCCACTCCTCTTAAGGGCTCGACGTCCTCG
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:31979846-31979865
CATATAAGGCTTACAAGATCCATTCCCCTA31979846GGCTATGTGGGATGTTACAATCATCTGCAAACCAAGTGGATGAGATAGCG
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:19633905-19633924
GAAAATATACATTTAAGGATCACTCTCCTT19633905GGCTATGTGGGATGTTACAAATATACACAATGAAAATAGTTTGGGGTATA
Malus hybrid cultivar cultivar Flame chromosome 9.
CP141935.1:3053021-3053040
ATAGGAACATATATATGATCCACTCTCCTG3053021GGCTATGTGGGATGTTACAATCCACCCCCCTTAGGGGTCCGACGTCCTCG
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:30552315-30552334
CATATAAGGCTTACAGGATCCACTCCCCTG30552315GGCTATGTGGGATGTTACAATCCACTCCCCTTAGGGGCCTCGCATCCTCG
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:35097211-35097230
CATATAAGGCTTACAAGATCTATTCCCCTA35097211GGCTATGTGGGATGTTACAATCATCTGTAAACCAAGTGGATGAGATAGCG
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141942.1:14361099-14361118
CATATAAGGCTTATAGGATCTTCACCCCTA14361099GGCTATGTGGGATGTTACAATCCACCTCCCTTAGGGGCCTGACGTCATTG
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:25874014-25874033
CATATAAGGCTTACATGATCCACTCTCTTA25874014GGCTATGTGGGATGTTACAATCCACCCCCTTAGGGGCCCGACGTCCTTAT
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141958.1:3619523-3619542
CATATAAGGCTTACATGATCCACTCCCCTG3619523GGCTATGTGGGATGTTACAATCCACCCCCCTCAGGGGCCCGACATCCTCG
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141961.1:17306307-17306326
CATATAAGGCTTACAAGATCCATTCCCATG17306307GGCTATGTGGGATGTTACAATCCACTCCTCTTAAGGGCTCGACGTCCTCG
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141965.1:17977183-17977202
GGGAATATAAATTTAAGGATCACTCGCTTG17977183GGCTATGTGGGATGTTACAATCCACCCCCCTTAGGGGCTCGACGTCATCG
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141975.1:3628692-3628711
CATATAAGGCTTACATGATCCACTCCCCTG3628692GGCTATGTGGGATGTTACAATCCACCCCCCTCAGGGGCCCGACATCCTCG
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141978.1:16809009-16809028
CATATAAGGCTTACAAGATCCATTCCCATG16809009GGCTATGTGGGATGTTACAATCCACTCCTCTTAAGGGCTCGACGTCCTCG
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141982.1:18342276-18342295
GAGAATATACATTTAAGGATCACTCCTCTA18342276GGCTATGTGGGATGTTACAATCCACCCCCCTTAGGGGCCTGATGTCCTCG
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:32188215-32188234
CATATAAGGCTTACAAGATCCATTCCCCTA32188215GGCTATGTGGGATGTTACAATCATCTGCAAACCAAGTGGATGAGATAGCG
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141985.1:14954840-14954859
CATATAAGGCTTATAGGATCTTCACCCCTA14954840GGCTATGTGGGATGTTACAATCCACCTCCCTTAGGGGCCTGACGTCATTG
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:290936-290955
CATATAAGGCTTACAAGATCCACTCCCTTA290936GGCTATGTGGGATGTTACAATCCACCCCCTTTAGGGGCCCAACATCCTTG
Malus hybrid cultivar cultivar SH6 chromosome 9.
CP143366.1:27160422-27160441
GTGAATATACATTTAAGGATCACTCCCTTG27160422GGCTATGTGGGATGTTACAATCCACCCCCCTTAGGGGCCTGATGTCCTCG
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:30118819-30118838
CATATAAGGCTTACAGGATCCACTCCCCTG30118819GGCTATGTGGGATGTTACAATCCACTCCCCTTAGGGGCCTCGCATCCTCG
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:38246541-38246560
CATATAAGGCTTACATGATCCACTCCCCTG38246541GGCTATGTGGGATGTTACAATCCACCACCCTTAGGGGCCTGACGTTCTCG
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:14740328-14740347
CATATAAGGCTTAGAGGATCCACTCCCCTA14740328GGCTATGTGGGATGTTACAATCCACCCCTCTTAGGGGCCCGACGTCCTCG
Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143377.1:16903323-16903342
CATATAAGGCTTACATGATCCACTCCCCTG16903323GGCTATGTGGGATGTTACAATCCATCCCCCCTTAGGGGCCCGACGTCCTC
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143380.1:31628536-31628555
CATATAAGGCTTAGAGGATCCACACCCCTG31628536GGCTATGTGGGATGTTACAATCCACCCCCCTTAGGGGCCCGACGTCCTCG
Malus sylvestris genome assembly, chromosome: 9.
OU696511.1:26684732-26684751
GTGAATATACATTTAAGGATCACTCCCTTG26684732GGCTATGTGGGATGTTACAATCCACCCCCCTTAGGGGCCTGATGTCCTCG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:30011288-30011307
CATATAAGGCTTACAGGATCCACTCCCCTG30011288GGCTATGTGGGATGTTACAATCCACTCCCCTTAGGGGCCTCGCGTCCTCG
Malus sylvestris genome assembly, chromosome: 12.
OU696514.1:880460-880479
GGGAATATACATTTAAGGATCACTCCCCTC880460GGCTATGTGGGATGTTACAATCCACCCCCTTAGGGGCCCGACGCCCTCGT
Malus domestica genome assembly, chromosome: 10.
OU696686.1:29899189-29899208
CATATAAGGCTTACAGGATCCACTCCCCTG29899189GGCTATGTGGGATGTTACAATCCACTCCCCTTAGGGGCCTCGCATCCTCG
Malus domestica genome assembly, chromosome: 12.
OU696688.1:16183777-16183796
GTGAATATACATTTAAAGATCACTCCCTTG16183777GGCTATGTGGGATGTTACAATCCACTCCCCTTAGGGGCCCGACGTCCTCG
Malus domestica genome assembly, chromosome: 16.
OU696692.1:14781940-14781959
CATATAAGGCTTATAGGATCTTCACCCCTA14781940GGCTATGTGGGATGTTACAATCCACCTCCCTTAGGGGCCTGACGTCATTG
Malus domestica genome assembly, chromosome: 10.
OU744551.1:30081369-30081388
CATATAAGGCTTACAGGATCCACTCCCCTG30081369GGCTATGTGGGATGTTACAATCCACTCCCCTGGGCTATGTGGGATGTTAC
Malus domestica genome assembly, chromosome: 10.
OU744551.1:30081401-30081420
CTATGTGGGATGTTACAATCCACTCCCCTG30081401GGCTATGTGGGATGTTACAATCCACTCCCCTTAGGGGCCTCGCATCCTCG
Malus domestica genome assembly, chromosome: 10.
OU744551.1:30081764-30081783
CATATAAGGCTTACAAGATCCACTCCCCTG30081764GGCTATGTGGGATGTTACAATCCACTCCCCTGGGCTATGTGGGATGTTAC
Malus domestica genome assembly, chromosome: 10.
OU744551.1:30081796-30081815
CTATGTGGGATGTTACAATCCACTCCCCTG30081796GGCTATGTGGGATGTTACAATCCACTCCCCTTAGGGGCCTCGCATCCTCG
Malus domestica genome assembly, chromosome: 10.
OU744551.1:30082159-30082178
CATATAAGGCTTACAAGATCCACTCCCCTG30082159GGCTATGTGGGATGTTACAATCCACTCCCCTGGGCTATGTGGGATGTTAC
Malus domestica genome assembly, chromosome: 10.
OU744551.1:30082191-30082210
CTATGTGGGATGTTACAATCCACTCCCCTG30082191GGCTATGTGGGATGTTACAATCCACTCCCCTTAGGGGCCTCGCATCCTCG
Malus domestica genome assembly, chromosome: 12.
OU744553.1:833300-833319
GGGAATATACATTTAAGGATCACTCCCCTC833300GGCTATGTGGGATGTTACAATCCACCCCCTTAGGGGCCCGACGCCCTCGT
Malus domestica genome assembly, chromosome: 15.
OU744556.1:38253463-38253482
CATATAAGGCTTACATGATCCACTCCCCTG38253463GGCTATGTGGGATGTTACAATCCACCACCCTTAGGGGCCTGACGTTCTCG
Malus domestica genome assembly, chromosome: 1.
OU744953.1:195529-195548
CATATAAGGCTTACAAGATCCACTCCCTTA195529GGCTATGTGGGATGTTACAATCCACCCCCTTTAGGGGCCCAACATCCTTG
Malus domestica genome assembly, chromosome: 5.
OU744957.1:33173375-33173394
CATATAAGGCTTACATGATCCACTTCCTTG33173375GGCTATGTGGGATGTTACAATCTATCCCCCTTAGGGGCCCGACGTCTTCG
Malus domestica genome assembly, chromosome: 6.
OU744958.1:13769352-13769371
CATATAAGGCTTACAAGATCCACTCCCATG13769352GGCTATGTGGGATGTTACAATCCACCCCCCTTAAGGGTTCGACGTCCTCG
Malus domestica genome assembly, chromosome: 10.
OU744962.1:30801961-30801980
CATATAAGGCTTACAGGATCCACTCCCCTG30801961GGCTATGTGGGATGTTACAATCCACTCCCCTTAGGGGCCTCGCATCCTCG
Malus domestica genome assembly, chromosome: 15.
OU744967.1:38434711-38434730
CATATAAGGCTTACATGATCCACTCCCCTG38434711GGCTATGTGGGATGTTACAATCCACCACCCTTAGGGGCCTGACGTTCTCG
Malus domestica genome assembly, chromosome: 10.
OU745000.1:29905383-29905402
CATATAAGGCTTACAGGATCCACTCCCCTG29905383GGCTATGTGGGATGTTACAATCCACTCCCCTGGGCTATGTGGGATGTTAC
Malus domestica genome assembly, chromosome: 10.
OU745000.1:29905415-29905434
CTATGTGGGATGTTACAATCCACTCCCCTG29905415GGCTATGTGGGATGTTACAATCCACTCCCCTTAGGGGCCTCGCATCCTCG
Malus domestica genome assembly, chromosome: 10.
OU745000.1:29905778-29905797
CATATAAGGCTTACAAGATCCACTCCCCTG29905778GGCTATGTGGGATGTTACAATCCACTCCCCTGGGCTATGTGGGATGTTAC
Malus domestica genome assembly, chromosome: 10.
OU745000.1:29905810-29905829
CTATGTGGGATGTTACAATCCACTCCCCTG29905810GGCTATGTGGGATGTTACAATCCACTCCCCTTAGGGGCCTCGCATCCTCG
Malus domestica genome assembly, chromosome: 10.
OU745000.1:29906173-29906192
CATATAAGGCTTACAAGATCCACTCCCCTG29906173GGCTATGTGGGATGTTACAATCCACTCCCCTGGGCTATGTGGGATGTTAC
Malus domestica genome assembly, chromosome: 10.
OU745000.1:29906205-29906224
CTATGTGGGATGTTACAATCCACTCCCCTG29906205GGCTATGTGGGATGTTACAATCCACTCCCCTTAGGGGCCTCGCATCCTCG
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:31624169-31624188
CATATAAGGCTTACAAGATCCATTCCCCTA31624169GGCTATGTGGGATGTTACAATCATCTGCAAACCAAGTGGATGAGATAGCG
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:19881126-19881145
GAAAATATACATTTAAGGATCACTCTCCTT19881126GGCTATGTGGGATGTTACAAATATACACAATGAAAATAGTTTGGGGTATA
Malus x robusta genome assembly, chromosome: 6.
OY720330.1:5840569-5840588
CCCAAAAGGCTTACAGGATCCACTCCCCTG5840569GGCTATGTGGGATGTTACAATCCACCCCCCTTACGGGTCCGACGTCCTCG
Malus x robusta genome assembly, chromosome: 8.
OY720332.1:27150896-27150915
GTGAATATACATTTAAGGATCACTCCCTTG27150896GGCTATGTGGGATGTTACAATCCACCCCCCTTAGGGGCCTGATGTCCTCG
Malus x robusta genome assembly, chromosome: 13.
OY720337.1:5208748-5208767
CATATAAGGTTTAGATGATTCATTCCCCTA5208748GGCTATGTGGGATGTTACAATCCACATCCCTTAGGGGTCTGACGTCCTTG
Malus x robusta genome assembly, chromosome: 17.
OY720341.1:11069039-11069058
CATATAAGGCTTACATGATCCACTCCCCTA11069039GGCTATGTGGGATGTTACAATCCAACCCCTTTAGGGGCCCGACGTCCTCG
Crataegus laevigata genome assembly, chromosome: 7.
OY756944.1:7499392-7499411
CATATAAGGCACATCACCTCCTCTTTGTTA7499392GGCTATGTGGGATGTTACAAATTGTCACATCCCAGTCTGCATAGCAAGAT
Crataegus laevigata genome assembly, chromosome: 8.
OY756945.1:28471484-28471503
CATAAAAGGCTTACATGATCCTCTCCCCTG28471484GGCTATGTGGGATGTTACAAAACCCACATCCCTCCTTAGTATAGATAATA
Crataegus laevigata genome assembly, chromosome: 17.
OY756954.1:7993701-7993720
CATATATGGCTTACAGGATCCTCTCCTATG7993701GGCTATGTGGGATGTTACAATCCACCCCCTTAGGGGCCCAACGTCCTCGT
Pyrus communis genome assembly, chromosome: 5.
OY757072.1:15951133-15951152
AGGAATATACATATAAGGACCACTCCCCTA15951133GGCTATGTGGGATGTTACAAGCCACCCCCCTTAGGGGCCCGACGTCCTCG
Pyrus communis genome assembly, chromosome: 12.
OY757079.1:13770750-13770769
CATATAAAGCTTATAGGATCCACTCCTCTG13770750GGCTATGTGGGATGTTACAATCCACCCTCCTTAGGGGCCCGACGTCCTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCTATGTGGGATGTTACAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCTATGTGGGATGTTACAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=GGCTATGTGGGATGTTACAA&k=0&no_gap=0&offset=0&limit=50
0.165 | 0.058 | search_minus_done; http://172.18.8.135:50400/match?q=TTGTAACATCCCACATAGCC&k=0&no_gap=0&offset=0&limit=0
0.165 | 0.000 | cgi_end;

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