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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 08:01:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cenchrus purpureus cultivar elephant grass chromosome A5.
CP053458.1:21332454-21332473
TTCGCCGCCGACACCCTCCGGGATACCGAT21332454GGCTTTCTTGATGTCGGCGAGCCGCTCCTGGGCCTCGGCGGGCGATTCGG
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737490.1:476163482-476163501
GAGAGCCATCGAAAAACGATGTCGGAAATT476163482GGCTTTCTTGATGTCGGCGACGGCTAGGGTTTATGGCTGCTAGCCAAACC
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737511.1:467199263-467199282
GAGAGCCATCAAAAAATGATGTCGGAAATT467199263GGCTTTCTTGATGTCGGCGACGGCTAGGGTTTGTGGCTGCTAGCCAAACC
Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737655.1:481819829-481819848
GAGAGCCATCAAAAAATGATGTCGGAAATT481819829GGCTTTCTTGATGTCGGCGACGGCTAGGGTTTGTGGCTGCTAGCCAAACC
Paenibacillus sp. B01 chromosome, complete genome.
CP045802.1:5469761-5469780
CGTGCCCATCAGGCCGACCTTGAGCACGCC5469761GGCTTTCTTGATGTCGGCGAGCTGGCCGCCCTCTGCGGCCGGCTGCTCCG
Paenibacillus albicereus strain UniB2 chromosome, complete genome.
CP051428.1:4916303-4916322
CGTTCCCATCAGGCCGACCTTGAGCACGCC4916303GGCTTTCTTGATGTCGGCGAGCAGGCCGCCATCGGCAGCCGGCTGCTCCG
Daucus carota subsp. sativus cultivar DH1 chromosome 4.
CP093346.1:44694411-44694430
GAGTTCCTCATGAAAAACCACCATTCACTA44694411TCGCCGACATCAAGAAAGCCATTCCACCTCACTGTTTCGAGCGCTCGCTA
Daucus carota isolate Kuroda chromosome 4.
CP125304.1:32983405-32983424
GAGTTCCTCATGAAAAACCACCATTCACTA32983405TCGCCGACATCAAGAAAGCCATTCCACCTCACTGTTTCGAGCGCTCGCTA
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737662.1:469187836-469187855
GGTTTGGCTAGCAGCCATAAACCCTAGCCG469187836TCGCCGACATCAAGAAAGCCAATTTCCGACATCGTTTTTCGATGGCTCTC
Triticum monococcum genome assembly, chromosome: 2A.
OY737859.1:51720098-51720117
CCAGGCGCGACGTGGAGCTTACCATGAAGC51720098TCGCCGACATCAAGAAAGCCCAGGAGGCAGCAAAGAACTCGGCCGAGGCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCTTTCTTGATGTCGGCGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCTTTCTTGATGTCGGCGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=GGCTTTCTTGATGTCGGCGA&k=0&no_gap=0&offset=0&limit=50
0.116 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=TCGCCGACATCAAGAAAGCC&k=0&no_gap=0&offset=0&limit=44
0.118 | 0.003 | cgi_end;

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