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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-28 17:06:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sprattus sprattus genome assembly, chromosome: 17.
OY735301.1:5117374-5117391
ATGGCACTCCTTTCAATCTCTCGGTGAGAT5117374GGGCTTATATCCAGACATTCACGCTCATCAACCCCGATTAGCTCCCGG
Pseudomonas sp. DNDY-54 chromosome, complete genome.
CP082271.1:3185-3202
CAGCGAGCGATGAGATTGATGGCTACAGAC3185GGGCTTATATCCAGACATTGAAACCTGTTTTTGAGCAGACGTTAGCCT
Opisthograptis luteolata genome assembly, chromosome: 7.
OV928040.1:3850210-3850227
GAAAACATGGATGTTTTACTAATTTCAGAA3850210GGGCTTATATCCAGACATTTATTTCAGAAGCGTATTGTCCGCCTCACA
Eupithecia exiguata genome assembly, chromosome: 24.
OX352250.1:1028656-1028673
CAGTGAATTAGCATAGGCTTTGGCTCTTTA1028656GGGCTTATATCCAGACATAGGCCTCCCCTACTAAGCGCCATAGCGCCC
Arvicola amphibius genome assembly, chromosome: 5.
LR862384.1:126502165-126502182
TATACCAGAAAGAAAGAAATCAGGCCCATG126502165ATGTCTGGATATAAGCCCTGCTGTAAAACTGTATACAATTTCATAGGG
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:393518312-393518329
GCTTTCCCCAGAACATGATTTAAATAGTAT393518312ATGTCTGGATATAAGCCCTGGGTTTATGTAAATGCGGTATATTTCAAT
Barbus barbus genome assembly, chromosome: 39.
OW387155.1:11773247-11773264
CGTTAAAATGTTTGTGCTTTACTACACCAC11773247ATGTCTGGATATAAGCCCTGTGATAACTCTTTTCTACATCATTTGATC
Barbus barbus genome assembly, chromosome: 42.
OW387158.1:11178426-11178443
CATTAAAATGTTTGTGCTTCACTACACCAC11178426ATGTCTGGATATAAGCCCTGTGATAACTCTTTTCTACATCATTTCATC
Medicago truncatula clone mth2-34c9, complete sequence.
AC144504.14:47459-47476
ATTATCGACAGTGTCGACGTGTCAATGTCC47459ATGTCTGGATATAAGCCCACTATGAACTAATAGCAAATGAAAGCCAAC
Maniola jurtina genome assembly, chromosome: 16.
HG995223.1:2602809-2602826
GAATATTCAATTTTTTTTATTTGTCTCTGT2602809ATGTCTGGATATAAGCCCTGTTTTTTTTAACCCCCGACCTAATAAGAG
Pecten maximus genome assembly, chromosome: 17.
LR736854.1:13502810-13502827
GGATTGCAGTTTTTATCAAGCCATAAGCCC13502810ATGTCTGGATATAAGCCCACCTGTGTCTTTTGTAAGATTTGCAATTCA
Medioppia subpectinata.
OC869128.1:1648-1665
CTCTCGCAAATAGCATGATATATAGCATTC1648ATGTCTGGATATAAGCCCTGTTTTTGATAACATATTCTTCTTCTAACA
Medioppia subpectinata.
OC869128.1:3998-4015
CTCTCGCAAATAGCATGATATATAGCATTC3998ATGTCTGGATATAAGCCCTGTTTTTGATAACATATTCTTCTTCTAACA
Dicyrtomina minuta genome assembly, chromosome: X1.
OX461809.1:29976229-29976246
CGAAGCATGTAGATGGTGGCTAAATTTTTA29976229ATGTCTGGATATAAGCCCGGCATAGGAGAAAATGTATAGTGAAACATC
Lordithon lunulatus genome assembly, chromosome: 9.
OZ012675.1:15881112-15881129
CTTATAAAAGATCGATAAAATAATAAAGAA15881112ATGTCTGGATATAAGCCCCAATTTGTCCTAGTAATGGATCTCAATAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGGCTTATATCCAGACAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGCTTATATCCAGACAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=GGGCTTATATCCAGACAT&k=0&no_gap=0&offset=0&limit=50
0.182 | 0.065 | search_minus_done; http://172.18.8.135:50400/match?q=ATGTCTGGATATAAGCCC&k=0&no_gap=0&offset=0&limit=46
0.189 | 0.007 | cgi_end;

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