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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-16 10:20:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys percivali genome assembly, chromosome: 16.
OU015757.1:34054257-34054274
TTGTGGTGCTGGAGAGATAGTTCAGTGATT34054257GGGGATGTTTTTGGCATAATCATAAGAACCAGTTGAGATTACCACCCA
Sarcophilus harrisii genome assembly, chromosome: 1.
LR735554.1:78038806-78038823
TCTTTGCTATCAACATTGGCTCAATTTTAG78038806GGGGATGTTTTTGGCATATCATACAGAATCAACAAACTTTCTCATTCC
Plectropomus leopardus DNA, chromosome 8, nearly complete sequence.
AP022707.1:31379538-31379555
ATAGGCTGTTTTAAGACACAGTGACATCTA31379538GGGGATGTTTTTGGCATAACAAACCCAAACCGAATGGTAGCAAGAGCT
Pelobates cultripes genome assembly, chromosome: 07.
OW240918.1:155658937-155658954
TCCAAATCGGTCCCTGGGGGTTTGTTATTG155658937GGGGATGTTTTTGGCATAGCACATGCCGTGAGGTTTCTGATTTGCAGG
Gymnoscopelus microlampas genome assembly, chromosome: 16.
OY732718.1:10070183-10070200
TTGTTGCATGATGAGAATCTAGAGCATTCT10070183GGGGATGTTTTTGGCATAATTCATTCAACCAAAACAGCCATGATGGGA
Sprattus sprattus genome assembly, chromosome: 17.
OY735301.1:12528549-12528566
AATATGCCTGTGTAGATTTGTTTTACAGAA12528549GGGGATGTTTTTGGCATATGTAGATTACATGAGGTTGTTAACTGTTTC
Avena eriantha genome assembly, chromosome: 5C.
OU342744.1:116157129-116157146
CATAGCTCGATCGGTGGTAGGCGCGTGCTC116157129GGGGATGTTTTTGGCATAGACGAGCGCGAGATGGGTTGATCAGATCGA
Hordeum bulbosum genome assembly, chromosome: 3H_2.
OY737401.1:118125590-118125607
AACGAAGTCCAAACACAATAAAAAACCTAA118125590GGGGATGTTTTTGGCATATTTATGATTTTTGGGAAGAAGAATCAACAC
Neobacillus mesonae strain H20-5 chromosome, complete genome.
CP022572.1:401811-401828
TTCAAAAAAGCGAAAAATATCATCAATGAA401811GGGGATGTTTTTGGCATAAGCAGGAAACGTCAATCCCAATGTAGTTAC
Natranaerofaba carboxydovora strain ANCO1 chromosome, complete genome.
CP054394.1:2606801-2606818
ATGGCTTTTGATATGATGTTGTGGGACGAG2606801GGGGATGTTTTTGGCATAAGAAAGAGATTTGGCATAAGATAGCCCCAC
Neobacillus mesonae strain NS-6 chromosome, complete genome.
CP128196.1:393573-393590
TTCAAAAAAGCGAAAAATATCATCAATGAA393573GGGGATGTTTTTGGCATAAGCAGGAAACGTCAATCCCAATGTAGTTAC
Dicrocoelium dendriticum genome assembly, chromosome: 4.
OX104066.1:36053300-36053317
ATCCTAAGCTACGTCTTACACTCGTTTGGT36053300GGGGATGTTTTTGGCATACTGGTCGTGGAATCCTCTATTTTCTACCTT
Alloplasta piceator genome assembly, chromosome: 7.
OX333077.1:4452129-4452146
TCCCGATGGTTTTTTTTTGTCTAAGGGACG4452129GGGGATGTTTTTGGCATAAATATGCGATAAACCAAGAGGATTGCGAGA
Phengaris arion genome assembly, chromosome: 12.
OY751443.1:16147967-16147984
TTAACTGTATCCATTGGAATAACAATATTT16147967GGGGATGTTTTTGGCATAACTTTCATTATTCTTGTACCGTGCTATATA
Tiliacea citrago genome assembly, chromosome: 11.
OY992791.1:12750716-12750733
CGAACTATTGAAATGTATACATTTCGTGTG12750716GGGGATGTTTTTGGCATACAACTTGTGAAGGACAATACAAGAGACCCA
Lutra lutra genome assembly, chromosome: 8.
LR738410.1:107157541-107157558
AAAAAGTGTGAGGTAGACAACAGCAAGAAT107157541TATGCCAAAAACATCCCCGGGAGACATCCTCTAGGGGTTTTAAAACTC
Vespertilio murinus genome assembly, chromosome: 5.
OZ004708.1:141401763-141401780
TCGAGAAACAGATAGGACCTTGAGTCGTCT141401763TATGCCAAAAACATCCCCAAATCCCACCCTTTCCTGTGTATCTTAGCA
Nesoenas mayeri genome assembly, chromosome: Z.
OY720060.1:17653125-17653142
GAGATTTTATACTGTGCGGAGAGTCAAAAA17653125TATGCCAAAAACATCCCCTGTTCATGACTCAATGAGGAAGTCCTTTTA
TSA: Fish metagenome RNA, contig: contig24577_C3651799, isolate: DF4107.
LA143434.1:628-645
GTCCAGGAAAACTCAAGAAGCTAGCTATAC628TATGCCAAAAACATCCCCAGAAATCTCTTGGAAAGACAGAGACAAAAA
TSA: Fish metagenome RNA, contig: contig22626_scaffold18246, isolate: DFGC6.
LA174269.1:2847-2864
GTCCAGGAAAACTCAAGAAGCTAGCTATAC2847TATGCCAAAAACATCCCCAGAAATCTCTTGGAAAGACAGAGACAAAAA
Mus musculus chromosome 10 clone RP23-419G20 map 10, LOW-PASS SEQUENCE SAMPLING.
AC130495.4:1039-1056
GTGGATTCGTAGGGAGAGTGTAAAGACAAA1039TATGCCAAAAACATCCCCCTTTTCTAATAATCAGAACTGAATAGCTTA
Hygrocybe punicea genome assembly, chromosome: 3.
OY744463.1:7074478-7074495
TCTTCAAGCCAACTGAAGTCTTGTTCATTG7074478TATGCCAAAAACATCCCCTGCAAATTACCATTCAGACTAAGGTTGTGG
Berberis vulgaris genome assembly, chromosome: 6.
OY747129.1:8321363-8321380
ACCACAACAACCAAGGAGGTGTTCATTTTC8321363TATGCCAAAAACATCCCCAAATGCACCAACAAACATGTATAATTTTCT
Lutzomyia longipalpis isolate SR_M1_2022 chromosome 2.
CP101403.1:25464833-25464850
CATTTCACACCCCCCATAGCATGTGGAGTG25464833TATGCCAAAAACATCCCCAAAGTCGTCTGATTATCCGCACACACACAG
Siphonodentalium dalli isolate Sc116.8C chromosome VII.
CP136067.1:146882249-146882266
AGTGACGAATGTAGAATCAGTTATCGTTCG146882249TATGCCAAAAACATCCCCCGATATATCAGCGTCCGAAGTGCTGGTTGT
Hermetia illucens genome assembly, chromosome: 1.
LR899009.1:73425120-73425137
GAGGGGGTAAGTGTTAATATAGTTTCTACA73425120TATGCCAAAAACATCCCCGGAGGAAAGACCAACCAACCAAGTCTGCAG
Aporophyla lueneburgensis genome assembly, chromosome: 12.
OW028745.1:17533232-17533249
CCTGTTAATGATGATTAAAAAACTTTATTT17533232TATGCCAAAAACATCCCCAGTTACCGTTCATTGTTATTTATGACAGTA
Gonocerus acuteangulatus genome assembly, chromosome: 6.
OX328128.1:70907947-70907964
GTCAAAAATCAACTTTGATAGGCATCCCCT70907947TATGCCAAAAACATCCCCCTCAAAAACGGCATTTTGAGAAATAATAAC
Aporophyla nigra genome assembly, chromosome: 13.
OX382304.1:14145604-14145621
CCTGTTAATGATGATTAAAAAACTTTATTT14145604TATGCCAAAAACATCCCCAGTTACCGTTCATTGTTATTTATGACAGTA
Octopus vulgaris genome assembly, chromosome: 13.
OX597826.1:3637463-3637480
GAAGAAGAAGAAGAAGATTTTGGTACGTTT3637463TATGCCAAAAACATCCCCTTGTTGAATGTTTAAGAAATGCCTGTGAAT
Sepiola atlantica genome assembly, chromosome: 34.
OY744548.1:67032617-67032634
TTATTCTTTCTTTATTCAAATAGTTAAACA67032617TATGCCAAAAACATCCCCTTGTGCGTTCTTCGTTTTTCCTATGTTTCG
Pyrausta aurata genome assembly, chromosome: 10.
OY757261.1:7667753-7667770
GAAAAGACATAAGCATAGTTTTGAGATTAT7667753TATGCCAAAAACATCCCCATCTATGAAATTAAATTAAATTAAATTTAT
Dasysyrphus tricinctus genome assembly, chromosome: 4.
OY992533.1:121746329-121746346
CCAAAACCCGTACGTCAATAAAATTAAGAA121746329TATGCCAAAAACATCCCCACTACCTATGAGAGCAGACATTAAAGCTTA
Oxycera nigricornis genome assembly, chromosome: 4.
OZ012662.1:4144547-4144564
TATTTTGAAGCTCAATGTTAGTTTGAAAAA4144547TATGCCAAAAACATCCCCGAATAAATTTTTCACATTTGGCGCCATCGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGGGATGTTTTTGGCATA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGGATGTTTTTGGCATA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.118 | 0.109 | search_plus_done; http://172.18.8.135:50400/match?q=GGGGATGTTTTTGGCATA&k=0&no_gap=0&offset=0&limit=50
0.200 | 0.082 | search_minus_done; http://172.18.8.135:50400/match?q=TATGCCAAAAACATCCCC&k=0&no_gap=0&offset=0&limit=35
0.213 | 0.013 | cgi_end;

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