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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 04:40:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KBrB046B17F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB046B17, genomic survey sequence.
DX044954.1:450-472
AATGTAGATTTCACAAGAGTCAAAAGATTT450GGTGAGAAGAACTCTTTGTACGGTTGTGAATAATGTGATGTTAGTCTTCAACA
KBrH050O17F KBrH, Brassica rapa HindIII BAC library Brassica rapa subsp. pekinensis genomic clone KBrH050O17, genomic survey sequence.
DX913031.1:264-286
AATGTAGATTTCACAAGAGTCAAAAGATTT264GGTGAGAAGAACTCTTTGTACGGTTGTGAATAATGTGATGTTAGTCTTCAACA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB009G06, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
AC240986.1:1184-1206
AATGTAGATTTCACAAGAGTCAAAAGATTT1184GGTGAGAAGAACTCTTTGTACGGTTGTGAATAATGTGATGTTAGTCTTCAACA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB070G10, *** SEQUENCING IN PROGRESS ***, 6 ordered pieces.
AC241060.1:26882-26904
AATGTAGATTTCACAAGAGTCAAAAGATTT26882GGTGAGAAGAACTCTTTGTACGGTTGTGAATAATGTGATGTTAGTCTTCAACA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH006C14, complete sequence.
AC189554.2:133817-133839
AATGTAGATTTCACAAGAGTCAAAAGATTT133817GGTGAGAAGAACTCTTTGTACGGTTGTGAATAATGTGATGTTAGTCTTCAACA
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:1647788-1647810
AATGTAGATTTCACAAGAGTCAAAAGATTT1647788GGTGAGAAGAACTCTTTGTACGGTTGTGAATAATGTGATGTTAGTCTCCAACA
Brassica napus genome assembly, chromosome: A03.
HG994357.1:1700616-1700638
AATGTAGATTTCACAAGAGTCAAAAGATTT1700616GGTGAGAAGAACTCTTTGTACGGTTGTGAATAATGTGATGTTAGTCTCCAACA
Brassica rapa genome, scaffold: A03.
LR031572.1:1649085-1649107
AATGTAGATTTCACAAGAGTCAAAAGATTT1649085GGTGAGAAGAACTCTTTGTACGGTTGTGAATAATGTGATGTTAGTCTTCAACA
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:1649933-1649955
AATGTAGATTTCACAAGAGTCAAAAGATTT1649933GGTGAGAAGAACTCTTTGTACGGTTGTGAATAATGTGATGTTAGTCTTCAACA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB022F09, complete sequence.
AC240998.1:48425-48447
TGTTGAAGACTAACATCACATTATTCACAA48425CCGTACAAAGAGTTCTTCTCACCAAATCTTTTGACTCTTGTGAAATCTACATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTGAGAAGAACTCTTTGTACGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTGAGAAGAACTCTTTGTACGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.147 | 0.139 | search_plus_done; http://172.18.8.135:50400/match?q=GGTGAGAAGAACTCTTTGTACGG&k=0&no_gap=0&offset=0&limit=50
0.170 | 0.023 | search_minus_done; http://172.18.8.135:50400/match?q=CCGTACAAAGAGTTCTTCTCACC&k=0&no_gap=0&offset=0&limit=41
0.171 | 0.001 | cgi_end;

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