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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-04 07:41:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Solanum melongena mRNA, clone: AE002H07, 5'end, expressed in ovary at anthesis.
FS000835.1:27-46
ATCCGTTTTAGTTTCAATTTATTTAT27GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTGTACTGTGGTTACTGT
Solanum melongena mRNA, clone: AE006I07, 5'end, expressed in ovary at anthesis.
FS003224.1:50-69
TTAGATCCGTTTTAGTTTCAATTTATTTAT50GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTGTACTGTGGTTACTGT
Solanum melongena mRNA, clone: CHX03C18, 5'end, expressed in ovary at 24h after anthesis.
FS012808.1:497-516
TTAGATCCGTTTTAGTTTCAATTTATTTAT497GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTG
Solanum melongena mRNA, clone: CHX03E10, 5'end, expressed in ovary at 24h after anthesis.
FS012883.1:155-174
TTAGATCCGTTTTAGTTTCAATTTATTTAT155GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTGTACTGTGGTTACTGT
Solanum melongena mRNA, clone: OVS02B11, 5'end, expressed in ovary at 5d pre-anthesis.
FS030197.1:32-51
TTAGATCCGTTTTAGTTTCAATTTATTTAT32GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTGTACTGTGGTTACTGT
Solanum melongena mRNA, clone: PED04G24, 5'end, expressed in peduncle at anthesis.
FS035382.1:463-482
TTAGATCCGTTTTAGTTTCAATTTATTTAT463GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTGTACTGTGGTTACTGT
Solanum melongena mRNA, clone: PED06G13, 5'end, expressed in peduncle at anthesis.
FS036634.1:170-189
TTAGATCCGTTTTAGTTTCAATTTATTTAT170GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTGTACTGTGGTTACTGT
Solanum melongena mRNA, clone: PLA05F08, 5'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS045397.1:16-35
TTTCAATTTATTTAT16GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTGTACTGTGGTTACTGT
Solanum melongena mRNA, clone: RBW07K08, 5'end, expressed in root at 3w after germination.
FS052932.1:500-519
TTAGATCCGTTTTAGTTTCAATTTATTTAT500GGTTCCGAAGTTCGATTGAAGTTCCGTT
Solanum melongena mRNA, clone: SmFL10N02, 5'end.
FS073362.1:616-635
TTAGATCCGTTTTAGTTTCAATTTATTTAT616GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTGTACTGTGGTTACTGT
Solanum melongena mRNA, clone: SmFL31K17, 5'end.
FS087793.1:616-635
TTAGATCCGTTTTAGTTTCAATTTATTTAT616GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTGTACTGTGGTTACTGT
Solanum melongena mRNA, clone: SmFL34F13, 5'end.
FS089701.1:476-495
TTAGATCCGTTTTAGTTTCAATTTATTTAT476GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTGTACTGTGGTTACTGT
Solanum torvum mRNA, clone: TVL05A04, 5'end, expressed in leaf at vegetative stage, 2 months after germination.
FS100498.1:583-602
TTGGATGGTTTTTAGTTTGAATTTGTTTAT583GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTTTACTGTGGTTTCTGT
Solanum torvum mRNA, clone: TVR06K21, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS108234.1:502-521
TTGGATGGTTTTTAGTTTGAATTTGTTTAT502GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTTTACTGTGGTTTCTGT
Solanum torvum mRNA, clone: TVR15P03, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS113644.1:586-605
TTGGATGGTTTTTAGTTTGAATTTGTTTAT586GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTTTACTGTGGTTTCTGT
Solanum torvum mRNA, clone: TVR24F11, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS118613.1:583-602
TTGGATGGTTTTTAGTTTGAATTTGTTTAT583GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTTT
Solanum torvum mRNA, clone: TVR32I05, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS123364.1:74-93
TTGGATGGTTTTTAGTTTGAATTTGTTTAT74GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTTTACTGTGGTTTCTGT
Solanum torvum mRNA, clone: TVR37N04, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS126364.1:505-524
TTGGATGGTTTTTAGTTTGAATTTGTTTAT505GGTTCCGAAGTTCGATTGAAGTTCCGTTTCTGGTTTACTGTGGTTTCTGT
Pemphredon lugubris genome assembly, chromosome: 3.
OW121817.1:46744570-46744589
TGCGAATATTCAAGTCCTAAAGAGTACTTA46744570GGTTCCGAAGTTCGATTGAAAACGAAAATACTACGTAGCAATGGGAGAAT
Solanum melongena mRNA, clone: AE001E09, 3'end, expressed in ovary at anthesis.
FS000155.1:128-147
ACAGTAACCACAGTACACCAGAAACGGAAC128TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: AE002A11, 3'end, expressed in ovary at anthesis.
FS000608.1:131-150
ACAGTAACCACAGTACACCAGAAACGGAAC131TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: AE004E24, 3'end, expressed in ovary at anthesis.
FS001964.1:244-263
ACAGTAACCACAGTACACCAGAAACGGAAC244TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: AE502M23, 3'end, expressed in ovary at 5d post-anthesis.
FS004909.1:140-159
ACAGTAACCACAGTACACCAGAAACGGAAC140TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: AE503M12, 3'end, expressed in ovary at 5d post-anthesis.
FS005549.1:126-145
ACAGTAACCACAGTACACCAGAAACGGAAC126TTCAATCGAACTTCGGAACCATAAATAAATTGAAGCTAAAACGGATCTAA
Solanum melongena mRNA, clone: AE507D01, 3'end, expressed in ovary at 5d post-anthesis.
FS007581.1:134-153
ACAGTAACCACAGTACACCAGAAACGGAAC134TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: CHX03C18, 3'end, expressed in ovary at 24h after anthesis.
FS012809.1:126-145
ACAGTAACCACAGTACACCAGAAACGGAAC126TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: CHX03E10, 3'end, expressed in ovary at 24h after anthesis.
FS012884.1:140-159
ACAGTAACCACAGTACACCAGAAACGGAAC140TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: CPA01K11, 3'end, expressed in ovary at 24h after anthesis.
FS015097.1:141-160
ACAGTAACCACAGTACACCAGAAACGGAAC141TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: CPA02L02, 3'end, expressed in ovary at 24h after anthesis.
FS015728.1:127-146
ACAGTAACCACAGTACACCAGAAACGGAAC127TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: MLF06E22, 3'end, expressed in leaf at fully expanded leaf.
FS026095.1:140-159
ACAGTAACCACAGTACACCAGAAACGGAAC140TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: OVL01D10, 3'end, expressed in ovary at 2d pre-anthesis.
FS027263.1:81-100
ACAGTAACCACAGTACACCAGAAACGGAAC81TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: OVL04M07, 3'end, expressed in ovary at 2d pre-anthesis.
FS029326.1:146-165
ACAGTAACCACAGTACACCAGAAACGGAAC146TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: PED04G24, 3'end, expressed in peduncle at anthesis.
FS035383.1:127-146
ACAGTAACCACAGTACACCAAAAACGGAAC127TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: PED06G13, 3'end, expressed in peduncle at anthesis.
FS036635.1:139-158
ACAGTAACCACAGTACACCAGAAACGGAAC139TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: PER04B17, 3'end, expressed in pericarp at 10d after anthesis.
FS039535.1:129-148
ACAGTAACCACAGTACACCAGAAACGGAAC129TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: RBW06O03, 3'end, expressed in root at 3w after germination.
FS052518.1:128-147
ACAGTAACCACAGTACACCAGAAACGGAAC128TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: RBW07K08, 3'end, expressed in root at 3w after germination.
FS052933.1:93-112
ACAGTAACCACAGTACACCAGAAACGGAAC93TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: ROL02L14, 3'end, expressed in root at 3w after germination.
FS053893.1:131-150
ACAGTAACCACAGTACACCAGAAACGGAAC131TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: ROL04B08, 3'end, expressed in root at 3w after germination.
FS054502.1:128-147
ACAGTAACCACAGTACACCAGAAACGGAAC128TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: SmFL10N02, 3'end.
FS073363.1:136-155
ACAGTAACCACAGTACACCAGAAACGGAAC136TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: SmFL31K17, 3'end.
FS087794.1:136-155
ACAGTAACCACAGTACACCAGAAACGGAAC136TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: SmFL34F13, 3'end.
FS089702.1:136-155
ACAGTAACCACAGTACACCAGAAACGGAAC136TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: SmFL36L02, 3'end.
FS091351.1:139-158
ACAGTAACCACAGTACACCAGAAACGGAAC139TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum melongena mRNA, clone: SmFL37K04, 3'end.
FS092015.1:136-155
ACAGTAACCACAGTACACCAGAAACGGAAC136TTCAATCGAACTTCGGAACCATAAATAAATTGAAACTAAAACGGATCTAA
Solanum torvum mRNA, clone: TVL04F24, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS100115.1:141-160
ACAGAAACCACAGTAAACCAGAAACGGAAC141TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA
Solanum torvum mRNA, clone: TVL04P05, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS100458.1:141-160
ACAGAAACCACAGTAAACCAGAAACGGAAC141TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAAACCATCCA
Solanum torvum mRNA, clone: TVL05A04, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS100499.1:152-171
ACAGAAACCACAGTAAACCAGAAACGGAAC152TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA
Solanum torvum mRNA, clone: TVL06A02, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS101075.1:128-147
ACAGAAACCACAGTAAACCAAAAACGGAAC128TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA
Solanum torvum mRNA, clone: TVL08B18, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS102248.1:152-171
ACAGAAACCACAGTAAACCAGAAACGGAAC152TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA
Solanum torvum mRNA, clone: TVL30D21, 3'end, expressed in leaf at vegetative stage, 2 months after germination.
FS103947.1:198-217
ACAGAAACCACAGTAAACCAGAAACGGAAC198TTCAATCGAACTTCGGAACCATAAACAAATTCAAACTAAAAACCATCCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTTCCGAAGTTCGATTGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTTCCGAAGTTCGATTGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.353 | 1.344 | search_plus_done; http://172.18.8.135:50400/match?q=GGTTCCGAAGTTCGATTGAA&k=0&no_gap=0&offset=0&limit=50
3.878 | 2.526 | search_minus_done; http://172.18.8.135:50400/match?q=TTCAATCGAACTTCGGAACC&k=0&no_gap=0&offset=0&limit=31
3.899 | 0.021 | cgi_end;

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