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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-04 14:04:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

comvsuca1005_a08 SSH library of flowers of Capsicum - Arabidopsis Capsicum annuum cDNA 5', mRNA sequence.
EL813938.1:188-208
GTTTAAGGAATTTGATAATTGGATACATGG188GGTTGGTAGTGATTGCCTTGAGAAAATTGCTACCCATAGCAAATAAATTGG
KS19061B08 KS19 Capsicum annuum cDNA, mRNA sequence.
GD092916.1:434-454
GTTTAAGGAATTTGATAATTGGATACATGG434GGTTGGTAGTGATTGCCTTGAGAAAATTGCTACCCATAGCAAATAAATTGG
KS20022B11 KS20 Capsicum annuum cDNA, mRNA sequence.
GD095324.1:357-377
GTTTAAGGAATTTGATAATTGGATACATGG357GGTTGGTAGTGATTGCCTTGAGAAAATTGCTACCCATAGCAAATAAATTGG
KS20033D09 KS20 Capsicum annuum cDNA, mRNA sequence.
GD096366.1:548-568
GTTTAAGGAATTTGATAATTGGATACATGG548GGTTGGTAGTGATTGCCTTGAGAAAATTGCTACCCATAGCAAATAAATTGG
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:233081094-233081114
GTTTAAGGAATTTGATAATTGGATACATGG233081094GGTTGGTAGTGATTGCCTTGAGAAAATTGCTACCCATAGCAAATAAATTGG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:237657507-237657527
GTTTAAGGAATTTGATAATTGGATACATGG237657507GGTTGGTAGTGATTGCCTTGAGAAAATTGCTACCCATAGCAAATAAATTGG
TSA: Capsicum annuum MGMT_Contig12960, mRNA sequence.
JW063204.1:165-185
CCAATTTATTTGCTATGGGTAGCAATTTTC165TCAAGGCAATCACTACCAACCCCATGTATCCAATTATCAAATTCCTTAAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTTGGTAGTGATTGCCTTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTTGGTAGTGATTGCCTTGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.366 | 0.357 | search_plus_done; http://172.18.8.135:50400/match?q=GGTTGGTAGTGATTGCCTTGA&k=0&no_gap=0&offset=0&limit=50
0.409 | 0.043 | search_minus_done; http://172.18.8.135:50400/match?q=TCAAGGCAATCACTACCAACC&k=0&no_gap=0&offset=0&limit=44
0.410 | 0.001 | cgi_end;

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