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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 08:18:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pipistrellus pipistrellus genome assembly, chromosome: 14.
LR862370.1:39224725-39224744
ACGGTGATGAGAATGACAGGGGCAGCAGGT39224725GGTTTGGGTGTGAGGAGAAAGATGGTTTGGAACAGCCGCTGAGGATGCTG
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:25277754-25277773
AGAGAGAGAGATGGGGCTTTTGAGTTGGAG25277754GGTTTGGGTGTGAGGAGAAAGCAGAGGGGTGGAGTGCTATTTATGAACAA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:36465729-36465748
AGAGAGAGAGATGGGGTTTTTGAGTTGGAG36465729GGTTTGGGTGTGAGGAGAAAGCAGAGGGGTGGAGTGCTATTTATGAACAA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:25647736-25647755
AGAGAGAGAGATGGGGCTTTTGAGTTGGAG25647736GGTTTGGGTGTGAGGAGAAAGCAGAGGGGTGGAGTGCTATTTATGAACAA
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:24131642-24131661
AGAGAGAGAAATGGGGTTTTTGAGTTGGAG24131642GGTTTGGGTGTGAGGAGAAAGCAGAGGGGTGGAGTGCTATTTATGAACAA
Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141959.1:28802470-28802489
AGAGAGAAATGGGGGTTTTCGGCCGTGGAG28802470GGTTTGGGTGTGAGGAGAAAGCAGAGGGGGTGGGGTGGTATTTATGAACA
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:25552226-25552245
AGAGAGAGAGATGGGGCTTTTGAGTTGGAG25552226GGTTTGGGTGTGAGGAGAAAGCAGAGGGGTGGAGTGCTATTTATGAACAA
Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141976.1:27363278-27363297
AGAGAGAAATGGGGGTTTTCGGCTGTGGAG27363278GGTTTGGGTGTGAGGAGAAAGCAGAGGGGGTGAGGTGGTATTTATGAACA
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:25297068-25297087
AGAGAGAGAGATGGGGCTTTTGAGTTGGAG25297068GGTTTGGGTGTGAGGAGAAAGCAGAGGGGTGGAGTGCTATTTATGAACAA
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143364.1:27037220-27037239
AGAGAGAAATGGGGGTTTTCGGCTGTGGAG27037220GGTTTGGGTGTGAGGAGAAAGCAGAGGGGGTGGGGTGGTATTTATGAACA
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143381.1:26404631-26404650
AGAGAGAAGTGGGGGTTTTCGGCTGTGGAG26404631GGTTTGGGTGTGAGGAGAAAGCAGAGGGGGTGGGGTGGTATTTATGGACA
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:21938705-21938724
AGAGAGAGAGATGGGGTTTTTGAGTTGGAG21938705GGTTTGGGTGTGAGGAGAAAGCAGAGGGGTGGAGTGCTATTTATGAACAA
Malus sylvestris genome assembly, chromosome: 7.
OU696509.1:27609402-27609421
AGAGAGAAATGGGGGTTTTCGGCTGTGGAG27609402GGTTTGGGTGTGAGGAGAAAGCAGAGGGGGTGAGGTGGTATTTATGAACA
Malus domestica genome assembly, chromosome: 1.
OU696677.1:21976871-21976890
AGAGAGAGAGATGAGGTTTTTGAGTTGGAG21976871GGTTTGGGTGTGAGGAGAAAGCAGAGGGGTGGAGTGCTATTTATGAACAA
Malus domestica genome assembly, chromosome: 7.
OU696683.1:26737642-26737661
AGAGAGAAATGGGGGTTTTCGGCTGTGGAG26737642GGTTTGGGTGTGAGGAGAAAGCAGAGGGGGTGGGGTGGTATTTATGAACA
Malus domestica genome assembly, chromosome: 1.
OU744542.1:25741256-25741275
AGAGAGAGAGATGGGGCTTTTGAGTTGGAG25741256GGTTTGGGTGTGAGGAGAAAGCAGAGGGGTGGAGTGCTATTTATGAACAA
Malus domestica genome assembly, chromosome: 7.
OU744548.1:27974318-27974337
AGAGAGAAATGGGGGTTTTCGGCTGTGGAG27974318GGTTTGGGTGTGAGGAGAAAGCAGAGGGGGTGGGGTGGTATTTATGAACA
Malus domestica genome assembly, chromosome: 1.
OU744953.1:25007198-25007217
AGAGAGAGAGATGGGGCTTTTGAGTTGGAG25007198GGTTTGGGTGTGAGGAGAAAGCAGAGGGGTGGAGTGCTATTTATGAACAA
Malus domestica genome assembly, chromosome: 7.
OU744959.1:26797813-26797832
AGAGAGAAATGGGGGTTTTCGGCTGTGGAG26797813GGTTTGGGTGTGAGGAGAAAGCAGAGGGGGTGGGGTGGTATTTATGAACA
Malus domestica genome assembly, chromosome: 1.
OU744991.1:22237264-22237283
AGAGAGAGAGATGGGGCTTTTGAGTTGGAG22237264GGTTTGGGTGTGAGGAGAAAGCAGAGGGGTGGAGTGCTATTTATGAACAA
Malus domestica genome assembly, chromosome: 7.
OU744997.1:27152210-27152229
AGAGAGAAATGGGGGTTTTCGGCTGTGGAG27152210GGTTTGGGTGTGAGGAGAAAGCAGAGGGGGTGGGGTGGTATTTATGAACA
Sambucus nigra genome assembly, chromosome: 5.
OX422211.1:525371719-525371738
ATTCGGGTCAGGGATGGAAGACACTTTTCG525371719GGTTTGGGTGTGAGGAGAAATTTGATACCCGATTCGGGTTTGGGTCGAGT
Crataegus laevigata genome assembly, chromosome: 10.
OY756947.1:29764145-29764164
AGAGAGAAGTGGGGTTTTTCTGCTGTGGAG29764145GGTTTGGGTGTGAGGAGAAAGCAGAGGGGTGGGGTGGTATTTATGAACAA
Pyrus communis genome assembly, chromosome: 5.
OY757072.1:23243100-23243119
AGAGAGAGGTGGGGGTTTTCGGCTGTGGAG23243100GGTTTGGGTGTGAGGAGAAAGCAGAGGGGGGTGGGGTGGTATTTATGAAC
Pipistrellus pygmaeus genome assembly, chromosome: 14.
OX465316.1:14757399-14757418
CAGCATCCTCAGCGGCTGTTCCCAACCATC14757399TTTCTCCTCACACCCAAACCACCTGCTGCCCCTGTCATTCTCATCACCGT
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141916.1:8583491-8583510
TGTTCATAAATACCACCCCACCCCCTCTGC8583491TTTCTCCTCACACCCAAACCCTCCACAGCCGAAAACCCCCATTTCTCTCT
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141933.1:8871882-8871901
TGTTCATAAATACCACCCCACCCCCTCTGC8871882TTTCTCCTCACACCCAAACCCTCCACAGCCGAAAACCCCCATTTCTCTCT
Malus x domestica expansin (Exp7) gene, partial sequence.
DQ072009.1:492-511
TTGTTCATAAATAGCACTCCACCCCTCTGC492TTTCTCCTCACACCCAAACCCTCCAACTCAAAAGCCCCATCTCTCTCTCT
Malus x robusta genome assembly, chromosome: 10.
OY720334.1:7843901-7843920
TGTTCATAAATACCACCCCACCCCCTCTGC7843901TTTCTCCTCACACCCAAACCCTCCACAGCCGAAAACCCCCATTTCTCTCT
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:8296903-8296922
TTGTTCATAAATAGCACTCCACCCCTCTGC8296903TTTCTCCTCACACCCAAACCCTCCAACTCAAAAGCCCCATCTCTCTCTCT
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:8450523-8450542
TTGTTCATAAATAGCACTCCACCCCTCTGC8450523TTTCTCCTCACACCCAAACCCTCCAACTCAAAAACCCCATCTCTTTCTAT
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:6295174-6295193
TTGTTCATAAATAGCACTCCACCCCTCTGC6295174TTTCTCCTCACACCCAAACCCTCCAACTCAAAAACCCCATCCTCTCTCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTTTGGGTGTGAGGAGAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTTTGGGTGTGAGGAGAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=GGTTTGGGTGTGAGGAGAAA&k=0&no_gap=0&offset=0&limit=50
0.140 | 0.034 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCTCCTCACACCCAAACC&k=0&no_gap=0&offset=0&limit=26
0.145 | 0.005 | cgi_end;

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