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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 07:25:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:27103665-27103684
ACGCAAACTTATACTAGGTGTAGATTAAGG27103665GTCACTCCGATAGCCATTTCATTTTAAGGTTTTAGTTTTCTTTTTCCGGT
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:25317675-25317694
ACGCAAACTTTTACTAGGTGTAGATTAAGG25317675GTCACTCCGATAGCCATTTCATTTTAAGGTTATAGTTTTCTTTTACTGGT
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:26943580-26943599
ACGCAAACTTATACTAGGTGTAGATTAAGG26943580GTCACTCCGATAGCCATTTCATTTTAAGGTTTTAGTTTTCTTTTTCCGGT
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:26710140-26710159
CGCTTTCTCTTCAATAGGTGTAGATTAAGG26710140GTCACTCCGATAGCCATTTCATTTTAGGGTTTTAGTTTTCTTTTACCGGT
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:26800226-26800245
ATGAAAACTTTTACTAGGTGTAAATGAAGG26800226GTCACTCCGATAGCCATTTCATTTTCAGGTTTTAGTTTTCTTTTACCGGT
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:25363991-25364010
ACGCAAACTTATACTAGGTGTAGATTAAGG25363991GTCACTCCGATAGCCATTTCATTTTAAGGTTTTAGTTTTCTTTTTCCGGT
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:23450815-23450834
ATGAAAACTTTTACTAGGTGTAAATGAAGG23450815GTCACTCCGATAGCCATTTCATTTTCAGGTTTTAGTTTTCTTTTACCGGT
Malus domestica genome assembly, chromosome: 1.
OU744542.1:27167220-27167239
ACGCAAACTTATACTAGGTGTAGATTAAGG27167220GTCACTCCGATAGCCATTTCATTTTAAGGTTTTAGTTTTCTTTTTCCGGT
Malus domestica genome assembly, chromosome: 1.
OU744953.1:26533086-26533105
ATGAAAACTTTTACTAGGTGTAAATGAAGG26533086GTCACTCCGATAGCCATTTCATTTTCAGGTTTTAGTTTTCTTTTACCGGT
Malus domestica genome assembly, chromosome: 1.
OU744991.1:23636717-23636736
CGCTTTCTCTTCAATAGGTGTAGATTAAGG23636717GTCACTCCGATAGCCATTTCATTTTAGGGTTTTAGTTTTCTTTTACCGGT
Malus domestica genome assembly, chromosome: 1.
OU744991.1:23726803-23726822
ATGAAAACTTTTACTAGGTGTAAATGAAGG23726803GTCACTCCGATAGCCATTTCATTTTCAGGTTTTAGTTTTCTTTTACCGGT
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:6815270-6815289
ACCGGTAAAAGAAAACTAAAACCTGAAAAT6815270GAAATGGCTATCGGAGTGACCCTTCATTTACACCTAGTAAAAGTTTTCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCACTCCGATAGCCATTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCACTCCGATAGCCATTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.101 | 0.092 | search_plus_done; http://172.18.8.135:50400/match?q=GTCACTCCGATAGCCATTTC&k=0&no_gap=0&offset=0&limit=50
0.122 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=GAAATGGCTATCGGAGTGAC&k=0&no_gap=0&offset=0&limit=39
0.123 | 0.001 | cgi_end;

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