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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 07:20:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
HG994376.1:308794012-308794031
TGTGTGTGAACCAATGCTTGTGTGTGCGTG308794012GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828103.2:343050523-343050542
TGTGTGTGAACCAATGCTTGTGTGTGCGTG343050523GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828117.1:330238931-330238950
TGTGTGTGAACCAATGCTTGTGTGTGCGTG330238931GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828141.1:359437495-359437514
TGTGTGTGAACCAATGCTTGTGTGTGCGTG359437495GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828155.1:319999970-319999989
TGTGTGTGAACCAATGCTTGTGTGTGCGTG319999970GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828176.1:335813160-335813179
TGTGTGTGAACCAATGCTTGTGTGTGCGTG335813160GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828268.1:333004985-333005004
TGTGTGTGAACCAATGCTTGTGTGTGCGTG333004985GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828275.1:346413798-346413817
TGTGTGTGAACCAATGCTTGTGTGTGCGTG346413798GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OU015703.1:345374151-345374170
TGTGTGTGAACCAATGCTTGTGTGTGCGTG345374151GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OU701465.1:301918760-301918779
TGTGTGTGAACCAATGCTTGTGTGTGCGTG301918760GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OX459904.1:334435910-334435929
TGTGTGTGAACCAATGCTTGTGTGTGCGTG334435910GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX459918.1:330454114-330454133
TGTGTGTGAACCAATGCTTGTGTGTGCGTG330454114GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX459925.1:331724211-331724230
TGTGTGTGAACCAATGCTTGTGTGTGCGTG331724211GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX459986.1:331186892-331186911
TGTGTGTGAACCAATGCTTGTGTGTGCGTG331186892GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX459993.1:332143563-332143582
TGTGTGTGAACCAATGCTTGTGTGTGCGTG332143563GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OX460000.1:330997094-330997113
TGTGTGTGAACCAATGCTTGTGTGTGCGTG330997094GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460028.1:333773674-333773693
TGTGTGTGAACCAATGCTTGTGTGTGCGTG333773674GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OX460035.1:330675752-330675771
TGTGTGTGAACCAATGCTTGTGTGTGCGTG330675752GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460042.1:332353311-332353330
TGTGTGTGAACCAATGCTTGTGTGTGCGGG332353311GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460049.1:334841768-334841787
TGTGTGTGAACCAATGCTTGTGTGTGCGTG334841768GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460056.1:330977592-330977611
TGTGTGTGAACCAATGCTTGTGTGTGCGTG330977592GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460077.1:331358549-331358568
TGTGTGTGAACCAATGCTTGTGTGTGCGTG331358549GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460084.1:335323916-335323935
TGTGTGTGAACCAATGCTTGTGTGTGCGTG335323916GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460091.1:334862947-334862966
TGTGTGTGAACCAATGCTTGTGTGTGCGGG334862947GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460105.1:335258446-335258465
TGTGTGTGAACCAATGCTTGTGTGTGCGTG335258446GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460133.1:329326024-329326043
TGTGTGTGAACCAATGCTTGTGTGTGCGGG329326024GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460161.1:334051250-334051269
TGTGTGTGAACCAATGCTTGTGTGTGCGTG334051250GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460168.1:309361947-309361966
TGTGTGTGAACCAATGCTTGTGTGTGCGTG309361947GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCAGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460175.1:334878391-334878410
TGTGTGTGAACCAATGCTTGTGTGTGCGTG334878391GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460182.1:331657396-331657415
TGTGTGTGAACCAATGCTTGTGTGTGCGTG331657396GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460189.1:334426271-334426290
TGTGTGTGAACCAATGCTTGTGTGTGCGTG334426271GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460210.1:331404984-331405003
TGTGTGTGAACCAATGCTTGTGTGTGCGTG331404984GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460217.1:330275622-330275641
TGTGTGTGAACCAATGCTTGTGTGTGCGTG330275622GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460231.1:337085938-337085957
TGTGTGTGAACCAATGCTTGTGTGTGCGTG337085938GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460252.1:332549770-332549789
TGTGTGTGAACCAATGCTTGTGTGTGCGTG332549770GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460259.1:336853358-336853377
TGTGTGTGAACCAATGCTTGTGTGTGCGTG336853358GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460308.1:333119966-333119985
TGTGTGTGAACCAATGCTTGTGTGTGCGTG333119966GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX590736.1:333616908-333616927
TGTGTGTGAACCAATGCTTGTGTGTGCGTG333616908GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX590743.1:333964056-333964075
TGTGTGTGAACCAATGCTTGTGTGTGCGTG333964056GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX590750.1:334303360-334303379
TGTGTGTGAACCAATGCTTGTGTGTGCGTG334303360GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX590764.1:333573122-333573141
TGTGTGTGAACCAATGCTTGTGTGTGCGTG333573122GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638744.1:333929155-333929174
TGTGTGTGAACCAATGCTTGTGTGTGCGTG333929155GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638765.1:337631612-337631631
TGTGTGTGAACCAATGCTTGTGTGTGCGTG337631612GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638772.1:333663956-333663975
TGTGTGTGAACCAATGCTTGTGTGTGCGTG333663956GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638779.1:336231576-336231595
TGTGTGTGAACCAATGCTTGTGTGTGCGTG336231576GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX638786.1:331842212-331842231
TGTGTGTGAACCAATGCTTGTGTGTGCGTG331842212GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OX638793.1:330356311-330356330
TGTGTGTGAACCAATGCTTGTGTGTGCGTG330356311GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638800.1:332246013-332246032
TGTGTGTGAACCAATGCTTGTGTGTGCGTG332246013GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX638807.1:331153125-331153144
TGTGTGTGAACCAATGCTTGTGTGTGCGTG331153125GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638814.1:338260959-338260978
TGTGTGTGAACCAATGCTTGTGTGTGCGTG338260959GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare genome assembly, chromosome: 3H.
OX638821.1:331893545-331893564
TGTGTGTGAACCAATGCTTGTGTGTGCGTG331893545GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638828.1:336834757-336834776
TGTGTGTGAACCAATGCTTGTGTGTGCGGG336834757GTCGGTTGGGAAGTTGCTAGATGTCAATGTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638870.1:335826536-335826555
TGTGTGTGAACCAATGCTTGTGTGTGCGTG335826536GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638877.1:334046924-334046943
TGTGTGTGAACCAATGCTTGTGTGTGCGTG334046924GTCGGTTGGGAAGTTGCTAGATGTCAATCTTCACTTGGGCGGTGTGATAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCGGTTGGGAAGTTGCTAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCGGTTGGGAAGTTGCTAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.101 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=GTCGGTTGGGAAGTTGCTAG&k=0&no_gap=0&offset=0&limit=50
0.154 | 0.053 | search_minus_done; http://172.18.8.135:50400/match?q=CTAGCAACTTCCCAACCGAC&k=0&no_gap=0&offset=0&limit=0
0.154 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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