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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-15 19:42:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium repens mRNA, clone: WCC10m24_087, unspecified EST.
FY457761.1:27-46
GTGGCGGTTACCGGTGAAAACCGTTA27TAAAGATTTGAGCCCTTCGCGTAACCACCATTAACGTCTACGAAACAAAG
Sphagnum contortum genome assembly, chromosome: 10.
OY987285.1:11655179-11655198
TAAACTAAGGTAAATAGGTTGTAATAATTA11655179TAAAGATTTGAGCCCTTCGCCTCCACAATGAAGGGCAAAGTGTTTACAAT
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:52988535-52988554
CTTTGTTTCGTAGACGTTAATGGTGGTTAC52988535GCGAAGGGCTCAAATCTTTATAACGGTTTTCACCGGTAACCGCCACTCAC
Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:55623924-55623943
GTTTGTTTCGTAGACGTTGATGGCGGTTAC55623924GCGAAGGGCTCAAATCTTTATAACGGTTTTCACCGGTCAACCGCCACTCA
Antiaris toxicaria isolate JCLG002 chromosome 3.
CP141168.1:66691974-66691993
AGCTGAATACTGGTTGGCTCAGAATAAAGA66691974GCGAAGGGCTCAAATCTTTAAAGCCCGAAAAGAAGAAAAGACACAAGCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAAAGATTTGAGCCCTTCGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAAAGATTTGAGCCCTTCGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.186 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=TAAAGATTTGAGCCCTTCGC&k=0&no_gap=0&offset=0&limit=50
0.205 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=GCGAAGGGCTCAAATCTTTA&k=0&no_gap=0&offset=0&limit=48
0.207 | 0.002 | cgi_end;

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