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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 08:10:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Cannabis sativa PK16477.1_1.CasaPuKu mRNA sequence.
JP449674.1:2702-2721
TTTTCCCAATTAATGACCAATGACGGCAGA2702TAACTTCACCACATGCTGCTGCAGCATTCGGTTTTTACTCAGTAAATCTA
168441 Tomato MboI BAC Library Solanum lycopersicum genomic clone SL_MboI0007H13 3, genomic survey sequence.
CZ965119.1:379-398
TCTTTGTTCAAGATGTCTGAAGAACCCTGC379TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAATTCTTCTT
Solanum lycopersicum cultivar Heinz 1706 chromosome 2 clone C02HBa0031A21, complete sequence.
AC215365.2:9665-9684
TCTTTGTTCAAGATGTCTGAGGAACCCTGC9665TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAATTCTTCTT
Solanum lycopersicum cultivar Heinz 1706 chromosome 2 clone C02HBa0161P02, complete sequence.
AC215402.2:48189-48208
TCTTTGTTCAAGATGTCTGAGGAACCCTGC48189TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAATTCTTCTT
Solanum lycopersicum Micro-Tom DNA, chromosome 2, draft genome sequence.
AP028936.1:59970473-59970492
TCTTTGTTCAAGATGTCTGAGGAACCCTGC59970473TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAATTCTTCTT
Solanum lycopersicum Micro-Tom DNA, chromosome 9, draft genome sequence.
AP028943.1:58664576-58664595
TCTTTGTTCAAGATGTCTGAAGAACCCTGC58664576TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAATTCTTCTT
Solanum lycopersicum cultivar I-3 chromosome 2.
CP023758.1:43779868-43779887
TCTTTGTTCAAGATGTCTGAGGAACCCTGC43779868TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAATTCTTCTT
Solanum lycopersicum cultivar I-3 chromosome 9.
CP023765.1:61863466-61863485
TCTTTGTTCAAGATGTCTGAAGAACCCTGC61863466TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAATTCTTCTT
Solanum pennellii chromosome ch05, complete genome.
HG975444.1:8736518-8736537
TCTTTGTTCAAAGTGTCTGAAGAACCCTGC8736518TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAACTCTTCTT
Solanum pennellii chromosome ch07, complete genome.
HG975446.1:70841310-70841329
TCTTTGTTCAAGGTGTCTGAAGAACCCTGC70841310TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAACTCTTCTT
Solanum lycopersicum chromosome ch02, complete genome.
HG975514.1:38356650-38356669
TCTTTGTTCAAGATGTCTGAGGAACCCTGC38356650TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAATTCTTCTT
Solanum lycopersicum chromosome ch09, complete genome.
HG975521.1:57460569-57460588
TCTTTGTTCAAGATGTCTGAAGAACCCTGC57460569TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAATTCTTCTT
Solanum lycopersicum genome assembly, chromosome: 2.
OU640345.1:42969964-42969983
TCTTTGTTCAAGATGTCTGAGGAACCCTGC42969964TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAATTCTTCTT
Solanum lycopersicum genome assembly, chromosome: 9.
OU640352.1:71980549-71980568
TCTTTGTTCAAGATGTCTGAAGAACCCTGC71980549TAACTTCACCACATGCTGCTGCATATCTCACAACAATCACAATTCTTCTT
Eptesicus nilssonii genome assembly, chromosome: 18.
OX621297.1:6230450-6230469
GTTACTGAGTATCTTGGCCAAGTTCAAACA6230450AGCAGCATGTGGTGAAGTTAGAATTCAGACTCACTCATGTCTGTCGCCAA
Solanum lycopersicum Micro-Tom DNA, chromosome 6, draft genome sequence.
AP028940.1:48995340-48995359
AAGAAGAGTTGTGATTGTTGTGAGATATGC48995340AGCAGCATGTGGTGAAGTTAGCAGGGTTCTTCAGACACCTTGAACAAAGA
Solanum lycopersicum cultivar I-3 chromosome 6.
CP023762.1:46512019-46512038
AAGAAGAGTTGTGATTGTTGTGAGATATGC46512019AGCAGCATGTGGTGAAGTTAGCAGGGTTCTTCAGACACCTTGAACAAAGA
Solanum lycopersicum chromosome ch06, complete genome.
HG975518.1:42901463-42901482
AAGAAGAGTTGTGATTGTTGTGAGATATGC42901463AGCAGCATGTGGTGAAGTTAGCAGGGTTCTTCAGACACCTTGAACAAAGA
Solanum lycopersicum genome assembly, chromosome: 6.
OU640349.1:49020708-49020727
AAGAAGAGTTGTGATTGTTGTGAGATATGC49020708AGCAGCATGTGGTGAAGTTAGCAGGGTTCTTCAGACACCTTGAACAAAGA
Gari tellinella genome assembly, chromosome: 6.
OV277861.1:31614986-31615005
GCTATAGGTTTCAGTGGGAGAGAAAAAGAA31614986AGCAGCATGTGGTGAAGTTACCCTTGTGTCGCAATATGTGACTAAATTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAACTTCACCACATGCTGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAACTTCACCACATGCTGCT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.373 | 0.365 | search_plus_done; http://172.18.8.135:50400/match?q=TAACTTCACCACATGCTGCT&k=0&no_gap=0&offset=0&limit=50
0.504 | 0.131 | search_minus_done; http://172.18.8.135:50400/match?q=AGCAGCATGTGGTGAAGTTA&k=0&no_gap=0&offset=0&limit=36
0.508 | 0.004 | cgi_end;

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