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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-08 04:29:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

JKBNM5_T7_007_B11_30JUN2004_093 JKBNM5 Brassica napus cDNA 3', mRNA sequence.
ES271365.1:31-52
TGGCCGCTTCAGTTAAAGCCAGCTTTGTCT31TAGCCTCCAAAGCCTGTATGGTTTGGTGCGTGGCTCTTCTTGGGTTCGTGAC
JKBNM5_T7_007_E06_30JUN2004_040 JKBNM5 Brassica napus cDNA 3', mRNA sequence.
ES271394.1:31-52
TGGCCGCTTCAGTTAAAGCCAGCTTTGTCT31TAGCCTCCAAAGCCTGTATGGTTTGGTGCGTGGCTCTTCTTGGGTTCGTGAC
RR1AN85JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
EV530969.1:521-542
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT521TAGCCTCCAAAGCCTGTATGGTTTTGTGTGTGGCTCTTCTTGGGTTCGTTTC
RR1AU67JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
EV531442.1:521-542
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT521TAGCCTCCAAAGCCTGTATGGTTTTGTGTGTGGCTCTTCTTGGGTTCGTTTC
RS2BD40JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EW730525.1:482-503
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT482TAGCCTCCAAAGCCTGTATGGTTTTGTGCGTGGCTCTTCTTGGGTTCGTTTC
RR1BZ07JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
EX751536.1:572-593
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT572TAGCCTCCAAAGCCTGTATGGTTTTGTGTGTGGCTCTTCTTGGGTTCGTTTC
RR4C767JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence.
EX775816.1:538-559
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT538TAGCCTCCAAAGCCTGTATGGTTTTGTGTGTGGCTCTTCTTGGGTTCGTTTC
RR1DS06JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
EY895017.1:552-573
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT552TAGCCTCCAAAGCCTGTATGGTTTTGTGTGTGGCTCTTCTTGGGTTCGTTTC
RR3EC09JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EY912535.1:566-587
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT566TAGCCTCCAAAGCCTGTATGGTTTTGTGTGTGGCTCTTCTTGGGTTCGTTTC
RR4DY34JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence.
EY919798.1:566-587
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT566TAGCCTCCAAAGCCTGTATGGTTTTGTGTGTGGCTCTTCTTGGGTTCGTTTC
RR1FL19JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
FD531284.1:506-527
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT506TAGCCTCCAAAGCCTGTATGGTTTTGTGTGTGGCTCTTCTTGGGTTCGTTTC
RR2EV45JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
FD537606.1:306-327
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT306TAGCCTCCAAAGCCTGTATGGTTTTGTGAGTGGCTCTTCTTGGGTTCGTTTC
RR3FM06JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
FD547415.1:562-583
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT562TAGCCTCCAAAGCCTGTATGGTTTTGTGCGTGGCTCTTCTTGGGTTCGTTTC
RR4FA31JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence.
FD554484.1:502-523
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT502TAGCCTCCAAAGCCTGTATGGTTTTGTGTGTGGCTCTTCTTGGGTTCGTTTC
RS3F845JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence.
FD583084.1:366-387
TGGCCGCTTCAGTTAAAGCTAGTCTTGTCT366TAGCCTCCAAAGCCTGTATGGTTTTGTGCGTGGCTCTTCTTGGGTTCGTTTC
RS1H250JQB RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence.
FD937173.1:592-613
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT592TAGCCTCCAAAGCCTGTATGGTTTTGTGCGTGGCTCTTCTTGGGTTCGTTTC
RS2HI34JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
FD945688.1:563-584
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT563TAGCCTCCAAAGCCTGTATGGTTTTGTGCGTGGCTCTTCTTGGGTTCGTTTC
RS3GC47JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence.
FD951740.1:497-518
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT497TAGCCTCCAAAGCCTGTATGGTTTTGTGCGTGGCTCTTCTTGGGTTCGTTTC
BNAPO3GH_T3_019_D03_13JULY2007_025 BNAPO3GH Brassica napus cDNA 5', mRNA sequence.
GR457415.1:481-502
TGGCCGCTTCAGTTAAAGCCAGCTTTGTCT481TAGCCTCCAAAGCCTGTATGGTTTG
BOGPG73TF BOGP Brassica oleracea genomic clone BOGPG73, genomic survey sequence.
BH496045.1:13-34
CCAGCTCTCTCT13TAGCCTCCAAAGCCTGTATGGTTTGGTGCGTGGCTCTTCTTGGGTTCGTGAC
BOMAO04TF BO_2_3_KB Brassica oleracea genomic clone BOMAO04, genomic survey sequence.
BH646297.1:139-160
TGGCCGCTTCAGTTAAAGCCAGCTTTGTCT139TAGCCTCCAAAGCCTGTATGGTTTGGTGCGTGGCTCTTCTTGGGTTCGTGAC
BONQX61TF BO_1.6_2_KB_tot Brassica oleracea genomic clone BONQX61, genomic survey sequence.
BZ446199.1:41-62
TGGCCGCTTCAGTTAAAGCCAGCTTTGTCT41TAGCCTCCAAAGCCTGTATGGTTTGGTGCGTGGCTCTTCTTGGGTTCGTGAC
Brassica napus genome assembly, chromosome: C05.
HG994369.1:4634050-4634071
TGGCCGCTTCAGTTAAAGCCAGCTTTGTCT4634050TAGCCTCCAAAGCCTGTATGGTTTGGTGCGTGGCTCTTCTTGGGTTCGTGAC
Brassica oleracea HDEM genome, scaffold: C5.
LR031877.1:4504057-4504078
TGGCCGCTTCAGTTAAAGCCAGCTTTGTCT4504057TAGCCTCCAAAGCCTGTATGGTTTGGTGCGTGGCTCTTCTTGGGTTCGTGAC
Raphanus sativus genome assembly, chromosome: 7.
LR778316.1:26953766-26953787
TGGCCGCTTCAGTTAGAGCTAGTCTTGTCT26953766TAGCCTCCAAAGCCTGTATGGTTTTGTGCGTGGCTCTTCTTGGGTTCGTTTC
91-E022898-021-017-E23-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022E2317Q, mRNA sequence.
CX187987.1:232-253
GTCACGAACCCAAGAAGAGCCACGCACCAA232ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
Brassica oleracea var. viridis mRNA, clone: KALE-057I08, 5' end sequence.
DK477532.1:249-270
GTCACGAACCCAAGAAGAGCCACGCACCAA249ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
Brassica oleracea var. viridis mRNA, clone: KALE-057I08, 3' end sequence.
DK537132.1:244-265
GTCACGAACCCAAGAAGAGCCACGCACCAA244ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
63JKCOT5_T3_018_C09_22JAN2005_075 63JKCOT5 Brassica napus cDNA 5', mRNA sequence.
DY021411.1:122-143
GTCACGAACCCAAGAAGAGCCACGCACCAA122ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
13JKBNM2_UP_011_H03_09DEC2003_017 13JKBNM2 Brassica napus cDNA 5', mRNA sequence.
ES264143.1:247-268
GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
13JKBNM2_UP_012_B01_09DEC2003_013 13JKBNM2 Brassica napus cDNA 5', mRNA sequence.
ES264164.1:247-268
GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_001_E01_25MAY2004_007 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265447.1:247-268
GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGG
44JK5DM_UP_003_B10_25MAY2004_078 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265583.1:242-263
GTCACGAACCCAAGAAGAGCCACGCACCAA242ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_003_E02_25MAY2004_008 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265605.1:247-268
GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_003_G10_25MAY2004_068 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265631.1:247-268
GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_007_F05_26MAY2004_037 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265956.1:247-268
GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_007_G04_26MAY2004_020 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES265966.1:247-268
GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_010_D01_26MAY2004_009 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES266189.1:247-268
GTCACGAACCCAAGAAGAGCCACGCACCAA247ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
69JKME5D_T3_030_B06_28MAR2005_046 69JKME5D Brassica napus cDNA 5', mRNA sequence.
ES268598.1:169-190
GTCACGAACCCAAGAAGAGCCACGCACCAA169ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
JKBNM5_T7_012_E11_30JUN2004_087 JKBNM5 Brassica napus cDNA 3', mRNA sequence.
ES271839.1:187-208
GTCACGAACCCAAGAAGAGCCACGCACCAA187ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_014_C11_02JUL2006_091 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES983430.1:179-200
GTCACGAACCCAAGAAGAGCCACGCACCAA179ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_015_A09_02JUL2006_079 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES983494.1:248-269
GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAGGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_016_B04_02JUL2006_030 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES983581.1:248-269
GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_019_C06_02JUL2006_044 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES983820.1:248-269
GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTA
44JK5DM_UP_021_H06_01JUL2006_034 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984023.1:248-269
GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_023_F05_01JUL2006_037 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984132.1:248-269
GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_024_B06_01JUL2006_046 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984175.1:248-269
GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_024_C10_01JUL2006_076 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984190.1:248-269
GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
44JK5DM_UP_024_D08_01JUL2006_058 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984200.1:180-201
GTCACGAACCCAAGAAGAGCCACGCACCAA180ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCG
44JK5DM_UP_028_E04_01JUL2006_024 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES984534.1:248-269
GTCACGAACCCAAGAAGAGCCACGCACCAA248ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
Brassica napus cultivar Xiang5A chromosome 11.
CP123886.1:54682389-54682410
GTCACGAACCCAAGAAGAGCCACGCACCAA54682389ACCATACAGGCTTTGGAGGCTAAGACAAAGCTGGCTTTAACTGAAGCGGCCA
Raphanus sativus genome assembly, chromosome: 7.
LR778316.1:31851142-31851163
GAAACGAACCCAAGAAGAGCCACGCACAAA31851142ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA
Raphanus sativus genome assembly, chromosome: 1.
OY743207.1:4427641-4427662
GAAACGAACCCAAGAAGAGCCACGCACAAA4427641ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA
Raphanus sativus genome assembly, chromosome: 1.
OY743207.1:5729610-5729631
GAAACGAACCCAAGAAGAGCCACGCACAAA5729610ACCATACAGGCTTTGGAGGCTAAGACAAGACTAGCTCTAACTGAAGCGGCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAGCCTCCAAAGCCTGTATGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAGCCTCCAAAGCCTGTATGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.720 | 1.711 | search_plus_done; http://172.18.8.135:50400/match?q=TAGCCTCCAAAGCCTGTATGGT&k=0&no_gap=0&offset=0&limit=50
3.488 | 1.768 | search_minus_done; http://172.18.8.135:50400/match?q=ACCATACAGGCTTTGGAGGCTA&k=0&no_gap=0&offset=0&limit=25
3.506 | 0.019 | cgi_end;

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