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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 20:30:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Malus x robusta genome assembly, chromosome: 12.
OY720336.1:6891285-6891304
AGCACAGTTGGAATAACGGGAACCATTGGC6891285TATGCGGCTCCAGGTAAACTCTTCTAAAACTTCACAACTTCTCAAATTTC
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:5447022-5447041
AGCACAGTTGGAATAACGGGAACCATTGGC5447022TATGCGGCTCCAGGTAAACTCTTCTAAAACTTCACAACTTCTCAAATTTC
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:37684696-37684715
GAAATTTGAGAAGTTGTGAAGTTTTAGAAG37684696AGTTTACCTGGAGCCGCATAGCCAATGGTTCCCGTTATTCCAACTGTGCT
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:27103780-27103799
GAAATTTGAGAAGTTGTTAAGTTTTAGAAG27103780AGTTTACCTGGAGCCGCATAGCCAATGGTTCCCGTTATTCCAACTGTGCT
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:25317790-25317809
GAAATCTGAGAAGTTGTGAAGTTTTAGAAG25317790AGTTTACCTGGAGCCGCATAGCCAATGGTTCCCGTTATTCCAACTGTGCT
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:26943695-26943714
GAAATTTGAGAAGTTGTTAAGTTTTAGAAG26943695AGTTTACCTGGAGCCGCATAGCCAATGGTTCCCGTTATTCCAACTGTGCT
Malus domestica genome assembly, chromosome: 1.
OU744542.1:27167335-27167354
GAAATTTGAGAAGTTGTTAAGTTTTAGAAG27167335AGTTTACCTGGAGCCGCATAGCCAATGGTTCCCGTTATTCCAACTGTGCT
Malus domestica genome assembly, chromosome: 1.
OU744953.1:26465554-26465573
GAAATTTGAGAAGTTGTGAAGTTTTAGAAG26465554AGTTTACCTGGAGCCGCATAGCCAATGGTTCCCGTTATTCCAACTGTGCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TATGCGGCTCCAGGTAAACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TATGCGGCTCCAGGTAAACT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=TATGCGGCTCCAGGTAAACT&k=0&no_gap=0&offset=0&limit=50
0.112 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=AGTTTACCTGGAGCCGCATA&k=0&no_gap=0&offset=0&limit=48
0.116 | 0.004 | cgi_end;

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