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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-04 03:30:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Aquila chrysaetos chrysaetos genome assembly, chromosome: Z.
LR606180.1:78481937-78481956
GTGGAAGCAGTGTTAGAGCTGAAGGCCCAG78481937TCAAGCACAGAGGAATGGCAGGAGCCTCTAATAGCAGGGTTCTGGCAGAA
Accipiter gentilis genome assembly, chromosome: Z.
OV839360.1:79950660-79950679
GTGGAAGTAGGGTTAAAGCTGAAGGCCCAG79950660TCAAGCACAGAGGAATGGCAGGAGCCTCTAATTGCAGGGTTCTGGCAGAA
Chroicocephalus ridibundus genome assembly, chromosome: Z.
OZ001737.1:77399628-77399647
CAGAAGGTGGAAGCAGGGCTGAACGCCAAG77399628TCAAGCACAGAGGAATGGCAGGAGCCTCTAATAGTAGCGTTCCGTCAGAG
Larus fuscus genome assembly, chromosome: Z.
OZ010757.1:76578722-76578741
CAGAAGGTGGAAGCAGGGCTGAAGGCCAAG76578722TCAAGCACAGAGGAATGGCAGGAGCCTCTAATAGTAGCGTTCCGTCCGAG
Brassica napus cultivar Xiang5A chromosome 9.
CP123884.1:45176499-45176518
ATATCGGCGGTGATTCACTTGCTCTGGAGT45176499TCAAGCACAGAGGAATGGCACGGTTTCTTGCAGGAATTCGGCTTTTAGGG
Podarcis lilfordi genome assembly, chromosome: 13.
OX395138.1:40379506-40379525
TGGATTTGGAAGCTCCCATCTTACTCCCTC40379506TGCCATTCCTCTGTGCTTGAATTGGGATGAATGTCTGATGTGCAAAGCAT
Podarcis cretensis genome assembly, chromosome: 13.
OX638161.1:43749071-43749090
TAGATTTGGAAGCTCCCATCTTACTCCCTC43749071TGCCATTCCTCTGTGCTTGAATTGGGATGAATGTCTGATGTGCAAAGCAT
Podarcis cretensis genome assembly, chromosome: 13.
OX638161.1:43772713-43772732
TGGATTTGGAAGCTCCCATCTTACTCCCTC43772713TGCCATTCCTCTGTGCTTGAATTGGGATGAATGTCTGATGTGCAAAGCAT
Podarcis cretensis genome assembly, chromosome: 13.
OX638161.1:43801958-43801977
TGGATTTGGAAGCTCCCATCTTACTCCCTC43801958TGCCATTCCTCTGTGCTTGAATTGGGATGAATGTCTGATGTGCAAAGCAT
Brassica napus genome assembly, chromosome: C02.
HG994366.1:21863161-21863180
CCCTAAAAGCCGAATTCCTGCAAGAAACCG21863161TGCCATTCCTCTGTGCTTGAACTCCAGAGCAAGTGAATCACCGCCGATAT
Brassica oleracea HDEM genome, scaffold: C2.
LR031874.1:23098391-23098410
CCCTAAAAGCCGAATTCCTGCAAGAAACCG23098391TGCCATTCCTCTGTGCTTGAACTCCAGAGCAAGTGAATCACCGCCGATAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCAAGCACAGAGGAATGGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAAGCACAGAGGAATGGCA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.115 | 0.107 | search_plus_done; http://172.18.8.135:50400/match?q=TCAAGCACAGAGGAATGGCA&k=0&no_gap=0&offset=0&limit=50
0.172 | 0.057 | search_minus_done; http://172.18.8.135:50400/match?q=TGCCATTCCTCTGTGCTTGA&k=0&no_gap=0&offset=0&limit=45
0.176 | 0.004 | cgi_end;

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