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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-04 07:39:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Mus musculus chromosome 1, clone RP24-170O7, complete sequence.
AC131980.9:125093-125112
TTAGAAATAAGTAAGTCAGCTAGTAAGAGT125093TCAGCAGGTACAGGAACTTGGCACCAAGCCTGATGTCCTGAGTTCAATCC
Mus musculus genome assembly, chromosome: 15.
OW971557.1:9205469-9205488
GCTCTGAAGAGGGTTGATGAGATAGATGGC9205469TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus genome assembly, chromosome: 15.
OW971588.1:9304777-9304796
GCTCTGAAGAGGGTTGATGAGATAGATGGC9304777TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus genome assembly, chromosome: 15.
OW971609.1:9091678-9091697
GCTCTGAAGAGGGTTGATGAGATAGATGGC9091678TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus domesticus genome assembly, chromosome: 15.
OW971620.1:9226805-9226824
GCTCTGAAGAGGGTTGATGAGATAGATGGC9226805TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus genome assembly, chromosome: 15.
OW971651.1:9162553-9162572
GCTCTGAAGAGGGTTGATGAGATAGATGGC9162553TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus genome assembly, chromosome: 15.
OW971705.1:9146880-9146899
GCTCTGAAGAGGGTTGATGAGATAGATGGC9146880TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus genome assembly, chromosome: 15.
OW971735.1:9264268-9264287
GCTCTGAAGAGGGTTGATGAGATAGATGGC9264268TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus genome assembly, chromosome: 15.
OW971756.1:9165828-9165847
GCTCTGAAGAGGGTTGATGAGATAGATGGC9165828TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus genome assembly, chromosome: 15.
OW971798.1:9235210-9235229
GCTCTGAAGAGGGTTGATGAGATAGATGGC9235210TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus genome assembly, chromosome: 15.
OW971819.1:9261837-9261856
GCTCTGAAGAGGGTTGATGAGATAGATGGC9261837TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus castaneus genome assembly, chromosome: 15.
OW971831.1:9300023-9300042
GCTCTGAAGAGGGTTGATGAGATAGATGGC9300023TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus genome assembly, chromosome: 15.
OW971850.1:9319705-9319724
GCTCTGAAGAGGGTTGATGAGATAGATGGC9319705TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus genome assembly, chromosome: 15.
OX389809.1:12983158-12983177
GCTCTGAAGAGGGTTGATGAGATAGATGGC12983158TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus genome assembly, chromosome: 15.
OX390158.1:12757276-12757295
GCTCTGAAGAGGGTTGATGAGATAGATGGC12757276TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Mus musculus genome assembly, chromosome: 15.
OX439029.1:10076185-10076204
GCTCTGAAGAGGGTTGATGAGATAGATGGC10076185TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Micromys minutus genome assembly, chromosome: 1.
OZ004780.1:58417365-58417384
TTAAAACTAAGTAAGTCAGCTAATAAGAGT58417365TCAGCAGGTACAGGAACTTGGCACTAAGCCTGATGACCTGAGTCCAATCC
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE01a005P24_SP6.
AM057893.1:405-424
GGTGTCAATGTCCACTATCATGAAGATGAG405TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE01a011K09_SP6.
AM059385.1:315-334
GGTGTCAATGTCCACTATCATGAAGATGAG315TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930051O20, 5' end partial sequence.
BB646915.1:381-400
GCTCTGAAGAGGGTTGATGAGATAGATGGC381TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
E1899 Chinese cabbage etiolated seedling library Brassica rapa subsp. pekinensis cDNA clone E1899, mRNA sequence.
BG544117.1:392-411
GGTGTCAATGTCCACTATCATGAAGATGAG392TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
BN15.001D01F011205 BN15 Brassica napus cDNA clone BN15001D01, mRNA sequence.
CD812981.1:399-418
GGTGTCAATATTCACTATCATGAAGATGAG399TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
BN15.019E11F020121 BN15 Brassica napus cDNA clone BN15019E11, mRNA sequence.
CD813337.1:398-417
GGTGTCAATATTCACTATCATGAAGATGAG398TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
BN15.026L24F020214 BN15 Brassica napus cDNA clone BN15026L24, mRNA sequence.
CD815560.1:426-445
GGTGTCAATGTCCACTATCATGAAGATGAG426TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
BN15.027I16F020325 BN15 Brassica napus cDNA clone BN15027I16, mRNA sequence.
CD815793.1:394-413
GGTGTCAATATTCACTATCATGAAGATGAG394TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
BN25.058D09F011029 BN25 Brassica napus cDNA clone BN25058D09, mRNA sequence.
CD824616.1:394-413
GGTGTCAATATTCACTATCATGAAGATGAG394TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
BN40.047E06F011228 BN40 Brassica napus cDNA clone BN40047E06, mRNA sequence.
CD830912.1:421-440
GGTGTCAATGTCCACTATCATGAAGATGAG421TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
83-E011129-021-005-F21-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022F215Q, mRNA sequence.
CX188689.1:245-264
GGTGTCAATATTCACTATCATGAAGATGAG245TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
38RDBRM_UP_027_D01_12JUL2004_009 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX267836.1:401-420
GGTGTCAATGTCCACTATCATGAAGATGAG401TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
38RDBRM_UP_048_A06_16JUL2004_048 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX269450.1:401-420
GGTGTCAATGTCCACTATCATGAAGATGAG401TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
39RDBRT_UP_008_D04_05APR2004_026 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
CX270269.1:412-431
GGTGTCAATGTCCACTATCATGAAGATGAG412TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
39RDBRT_UP_044_C10_21JUL2004_076 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
CX272731.1:412-431
GGTGTCAATGTCCACTATCATGAAGATGAG412TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. viridis mRNA, clone: KALE-010J13, 5' end sequence.
DK459603.1:154-173
GGTGTCAATGTCCACTATCATGAAGATGAG154TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. viridis mRNA, clone: KALE-015B06, 5' end sequence.
DK461316.1:425-444
GGTGTCAATGTCCACTATCATGAAGATGAG425TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. viridis mRNA, clone: KALE-018P17, 5' end sequence.
DK462808.1:430-449
GGTGTCAATGTCCACTATCATGAAGATGAG430TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. viridis mRNA, clone: KALE-019A19, 5' end sequence.
DK462834.1:430-449
GGTGTCAATGTCCACTATCATGAAGATGAG430TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. viridis mRNA, clone: KALE-020B22, 5' end sequence.
DK463239.1:430-449
GGTGTCAATGTCCACTATCATGAAGATGAG430TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. viridis mRNA, clone: KALE-051F22, 5' end sequence.
DK475178.1:425-444
GGTGTCAATGTCCACTATCATGAAGATGAG425TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. viridis mRNA, clone: KALE-075O01, 5' end sequence.
DK484562.1:498-517
GGTGTCAATGTCCACTATCATGAAGATGAG498TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. viridis mRNA, clone: KALE-079L06, 5' end sequence.
DK486022.1:425-444
GGTGTCAATGTCCACTATCATGAAGATGAG425TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. viridis mRNA, clone: KALE-107E19, 5' end sequence.
DK496588.1:425-444
GGTGTCAATGTCCACTATCATGAAGATGAG425TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. viridis mRNA, clone: KALE-111C01, 5' end sequence.
DK498053.1:425-444
GGTGTCAATGTCCACTATCATGAAGATGAG425TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. viridis mRNA, clone: KALE-118I22, 5' end sequence.
DK500886.1:430-449
GGTGTCAATGTCCACTATCATGAAGATGAG430TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
Brassica oleracea var. viridis mRNA, clone: KALE-149C20, 5' end sequence.
DK512587.1:425-444
GGTGTCAATGTCCACTATCATGAAGATGAG425TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
8RDBRH_UP_013_D07_12SEP2003_057 Brassica rapa - 8RDBRH Brassica rapa cDNA 5', mRNA sequence.
DY009804.1:401-420
GGTGTTAATATTCACTATCATGAAGATGAG401TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
BNSCSICT_UP_029_F04_22DEC2004_022 Brassica napus seed coat BNSCSICT Brassica napus cDNA 5', mRNA sequence.
DY011668.1:399-418
GGTGTCAATATTCACTATCATGAAGATGAG399TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
40JKME7D_UP_001_D06_25MAR2004_042 40JKME7D Brassica napus cDNA 5', mRNA sequence.
DY012001.1:394-413
GGTGTCAATATTCACTATCATGAAGATGAG394TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
40JKME7D_UP_007_F04_26MAR2004_022 40JKME7D Brassica napus cDNA 5', mRNA sequence.
DY012561.1:394-413
GGTGTCAATATTCACTATCATGAAGATGAG394TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
63JKCOT5_T3_001_B01_04JAN2005_013 63JKCOT5 Brassica napus cDNA 5', mRNA sequence.
DY017263.1:420-439
GGTGTCAATGTCCACTATCATGAAGATGAG420TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
48RDOAM_UP_030_B07_13SEP2004_061 O. Alba 48RDOAM Brassica oleracea cDNA 5', mRNA sequence.
DY018405.1:429-448
GGTGTCAATGTCCACTATCATGAAGATGAG429TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
63JKCOT5_T3_029_G11_25JAN2005_083 63JKCOT5 Brassica napus cDNA 5', mRNA sequence.
DY022430.1:374-393
GGTGTCAATGTCCACTATCATGAAGATGAG374TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
47RDOAH_UP_049_B12_20AUG2004_094 O. Alba 47RDOAH Brassica oleracea cDNA 5', mRNA sequence.
DY030102.1:427-446
GGTGTCAATGTCCACTATCATGAAGATGAG427TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
59ACAB6_UP_018_G11_23JUL2004_083 Brassica napus 59ACAB6 Brassica napus cDNA 5', mRNA sequence.
EE421128.1:394-413
GGTGTCAATATTCACTATCATGAAGATGAG394TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
59ACAB6_UP_030_B12_27JUL2004_094 Brassica napus 59ACAB6 Brassica napus cDNA 5', mRNA sequence.
EE422113.1:394-413
GGTGTCAATATTCACTATCATGAAGATGAG394TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
31ETGS12_UP_008_E11_10MAR2004_087 Brassica napus 31ETGS12 Brassica napus cDNA 5', mRNA sequence.
EE424146.1:399-418
GGTGTCAATATTCACTATCATGAAGATGAG399TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
34ETGS48_UP_018_C05_10FEB2005_043 Brassica napus 34ETGS48 Brassica napus cDNA 5', mRNA sequence.
EE430616.1:393-412
GGTGTCAATATTCACTATCATGAAGATGAG393TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
35ETGS60_UP_013_F10_12FEB2005_070 Brassica napus 35ETGS60 Brassica napus cDNA 5', mRNA sequence.
EE432282.1:394-413
GGTGTCAATATTCACTATCATGAAGATGAG394TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
4ETGS72H_UP_012_C05_14FEB2005_043 Brassica napus 4ETGS72h Brassica napus cDNA 5', mRNA sequence.
EE433866.1:221-240
GGTGTCAATATTCACTATCATGAAGATGAG221TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
5ETGS9H_UP_017_D09_05FEB2005_073 Brassica napus 5ETGS9h Brassica napus cDNA 5', mRNA sequence.
EE436639.1:394-413
GGTGTCAATATTCACTATCATGAAGATGAG394TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
6ETGS6H_UP_002_H10_16MAY2003_033 Brassica napus 6ETGS6h Brassica napus cDNA 5', mRNA sequence.
EE439662.1:394-413
GGTGTCAATATTCACTATCATGAAGATGAG394TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGCTGGTGGAGAAAGGTC
74ETGS48_UP_016_G06_28APR2005_036 74ETGS48 Brassica napus cDNA 5', mRNA sequence.
EE447592.1:399-418
GGTGTCAATATTCACTATCATGAAGATGAG399TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
BNSCS2CT_UP_026_E05_07JAN2005_039 Brassica napus seed coat BNSCS2CT Brassica napus cDNA 5', mRNA sequence.
EE464334.1:171-190
GGTGTCAATATTCACTATCATGAAGATGAG171TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
BNSCS3CT_UP_009_G04_08JAN2005_020 Brassica napus seed coat BNSCS3CT Brassica napus cDNA 5', mRNA sequence.
EE465678.1:399-418
GGTGTCAATATTCACTATCATGAAGATGAG399TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
BNSCS4CT_UP_008_A08_17JAN2005_064 Brassica napus seed coat BNSCS4CT Brassica napus cDNA 5', mRNA sequence.
EE468302.1:394-413
GGTGTCAATATTCACTATCATGAAGATGAG394TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
BNYS4DCT_UP_035_G11_22MAR2005_083 Brassica napus seeds BNYS4DCT Brassica napus cDNA 5', mRNA sequence.
EE478140.1:430-449
GGTGTCAATGTCCACTATCATGAAGATGAG430TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
DHBN6DCT_UP_005_B05_16FEB2005_045 BRASSICA NAPUS SEEDS BNDH6DCT Brassica napus cDNA 5', mRNA sequence.
EE483590.1:394-413
GGTGTCAATATTCACTATCATGAAGATGAG394TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTC
DHBN8DCT_UP_015_C04_26FEB2005_028 BRASSICA NAPUS SEEDS BNDH8DCT Brassica napus cDNA 5', mRNA sequence.
EE485422.1:394-413
GGTGTCAATATTCACTATCATGAAGATGAG394TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGG
KBrB045E06R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB045E06, genomic survey sequence.
DX044309.1:169-188
TGTATGCAGGTCCACTATCATGAAGATGAG169TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTT
KBrB087I05R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB087I05, genomic survey sequence.
DX076277.1:169-188
TGTATGCAGGTCCACTATCATGAAGATGAG169TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTT
Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930051O20 product:unclassifiable, full insert sequence.
AK047347.1:381-400
GCTCTGAAGAGGGTTGATGAGATAGATGGC381TCAGCAGGTACAGGAACTTGCCACCAAGTCTTAGGGCCCTAGTTCAGTCC
Rattus norvegicus clone CH230-173D5, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC131200.3:147579-147598
TTAAAACTAAGTCAGTCAGCTAACGAGAGG147579TCAGCAGGTACAGGAACTTGGCACCAAGCCTGATGACCTGAGTTCAATCC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH003N18, complete sequence.
AC189540.1:2096-2115
TGTATGCAGGTCCACTATCATGAAGATGAG2096TCAGCAGGTACAGGAACTTGCGGTGTCTGCGTTGTTGGTGGAGAAAGGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCAGCAGGTACAGGAACTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAGCAGGTACAGGAACTTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
2.341 | 2.333 | search_plus_done; http://172.18.8.135:50400/match?q=TCAGCAGGTACAGGAACTTG&k=0&no_gap=0&offset=0&limit=50
2.495 | 0.154 | search_minus_done; http://172.18.8.135:50400/match?q=CAAGTTCCTGTACCTGCTGA&k=0&no_gap=0&offset=0&limit=0
2.495 | 0.000 | cgi_end;

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