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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 05:52:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:32828236-32828258
ATTACCTTTATAAAAGGAGAATGGGGGGAT32828236GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCG
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:32869284-32869306
ATTACTTTTATAGAAGGAGAATGGGGGGAT32869284GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:34149020-34149042
ATTACTTTTATAAAAGGAGAATGGGGGGAT34149020GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCTGTGCTCA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:34159907-34159929
ACTATTACTTTTATAGGAGAATGGGGGGAT34159907GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:34222337-34222359
ATTACTTTTATAGAAGGAGAATGGGGGGAT34222337GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:31643408-31643430
ATTACTTTTATAGAAGGAGAATGGGGGGAT31643408GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:32127345-32127367
ATTACCTTTATAAAAGGAGAATGGGGGGAT32127345GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCG
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:32133439-32133461
ACTATTACTTTTATAGGAGAATGGGGGGAT32133439GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:32167733-32167755
ACTATTACTTTTATAGGAGAATGGGGGGAT32167733GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:32199196-32199218
ATTACTTTTATAGAAGGAGAATGGGGGGAT32199196GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:34398003-34398025
ATTACTTTTATAAAAGGAGAATGGGGGGAT34398003GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCTGTGCTCA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:34434873-34434895
ATTACTTTTATAGAAGGAGAATGGGGGGAT34434873GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:30795384-30795406
AGTATTACTTTTATAGGAGAATGGGGGGAT30795384GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:30820538-30820560
ATTACTTTTATAGAAGGAGAATGGGGGGAT30820538GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:33380654-33380676
ATTACTTTTATAAAAGGAGAATGGGGGGAT33380654GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCTGTGCTCA
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:33390950-33390972
ATTACTTTTATAGAAGGAGAATGGGGGGAT33390950GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus domestica genome assembly, chromosome: 10.
OU696686.1:33560305-33560327
ATTACTTTTATAAAAGGAGAATGGGGGGAT33560305GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCTGTGCTCA
Malus domestica genome assembly, chromosome: 10.
OU696686.1:33571189-33571211
ACTATTACTTTTATAGGAGAATGGGGGGAT33571189GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus domestica genome assembly, chromosome: 10.
OU696686.1:33633617-33633639
ATTACTTTTATAGAAGGAGAATGGGGGGAT33633617GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus domestica genome assembly, chromosome: 10.
OU744551.1:33491860-33491882
ATTACTTTTATAAAAGGAGAATGGGGGGAT33491860GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCTGTGCTCA
Malus domestica genome assembly, chromosome: 10.
OU744551.1:33502172-33502194
ATTACTTTTATAGAAGGAGAATGGGGGGAT33502172GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus domestica genome assembly, chromosome: 10.
OU744962.1:34477316-34477338
ATTACTTTTATAAAAGGAGAATGGGGGGAT34477316GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCTGTGCTCA
Malus domestica genome assembly, chromosome: 10.
OU744962.1:34487611-34487633
ATTACTTTTATAGAAGGAGAATGGGGGGAT34487611GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus domestica genome assembly, chromosome: 10.
OU745000.1:33315902-33315924
ATTACTTTTATAAAAGGAGAATGGGGGGAT33315902GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCTGTGCTCA
Malus domestica genome assembly, chromosome: 10.
OU745000.1:33326214-33326236
ATTACTTTTATAGAAGGAGAATGGGGGGAT33326214GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:31957865-31957887
ATTACCTTTATAAAAGGAGAATGGGGGGAT31957865GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCG
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:31964272-31964294
ACTATTACTTTTATAGGAGAATGGGGGGAT31964272GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:31996811-31996833
ATTACTTTTATAGAAGGAGAATGGGGGGAT31996811GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:31953716-31953738
ATTAGGGTTTTAGAAAGAGAATGGGGGAAT31953716GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAACAGTGCTCA
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:32027152-32027174
ATTATTACTTTTATAGGAGAATGGGGGGAT32027152GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:11407567-11407589
TTACTTTTATATAAGGAGAATGGGGGGGAT11407567GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCACTGCTCA
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:22770431-22770453
ATTACTTTTATAGAAGGAGAATGGGGGGAC22770431GTTGTCTACCTTAAACCCTTGGATATCATTGAGAAGGCGCCCAGCAGTGCTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCAAGGGTTTAAGGTAGACAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCAAGGGTTTAAGGTAGACAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=TCCAAGGGTTTAAGGTAGACAAC&k=0&no_gap=0&offset=0&limit=50
0.115 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGTCTACCTTAAACCCTTGGA&k=0&no_gap=0&offset=0&limit=50
0.135 | 0.020 | cgi_end;

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