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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-26 08:34:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

UCRVU05_CCNN22803_g1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN22803.g1, mRNA sequence.
FG860085.1:452-471
TAATCATCTCTCTGCACTCTTCACTCTTGT452TCCCTTCCTTTAACCCCAACGATGTAAGCACCAAAGCTAGTTCCTCCACC
Comarum palustre genome assembly, chromosome: 2.
OX637573.1:6195420-6195439
TTTAATCTTGGGCTTTAAAACCTTACGTAA6195420TCCCTTCCTTTAACCCCAACCAACATCTCTATCATATGATCATCCGTGAT
Comarum palustre genome assembly, chromosome: 4.
OX637575.1:8655371-8655390
TTTAATCTTGGGCTTTGAAACCTTACGTAA8655371TCCCTTCCTTTAACCCCAACCAACATCTATATCATATGATCATCCGTGAT
Comarum palustre genome assembly, chromosome: 6.
OX637577.1:22404030-22404049
GTTTAATCTTGGGCTTGAAACCTTACGTAA22404030TCCCTTCCTTTAACCCCAACCAACATCTCTATCATATGATCATCCGTGAT
Umbilicus rupestris genome assembly, chromosome: 23.
OY787627.1:545167-545186
AACACGAAGTCCTTCCGCACAAGACCTCTC545167TCCCTTCCTTTAACCCCAACGCAGCACGCGCCATCGCCGCTGTCCACAAT
Rhinatrema bivittatum genome assembly, chromosome: 1.
LR584387.1:817005888-817005907
GAGTGGGGGAGGGGCACGAGGGGGGATCCG817005888GTTGGGGTTAAAGGAAGGGATCAGAGGTGAGAGGGGCAGCTATGGGATAC
MOPCR16TF MOP Vigna unguiculata cDNA 5', mRNA sequence.
FF543104.1:424-443
CGGTGAGGAACTAGCTTTGGTGCTTACATC424GTTGGGGTTAAAGGAAGGGAACAAGAGTGAAGAGTGCAGAGAGATGATTA
UCRVU05_CCNN22803_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN22803.b1, mRNA sequence.
FG860084.1:642-661
GGTGGAGGAACTAGCTNTGGTGCTTACATC642GTTGGGGTTAAAGGAAGGGAACAAGAGTGAAGAGTGCAGAGAGATGATTA
Vigna angularis mRNA, clone: VES03J09.
HX943437.1:558-577
GGTGGAGGAGCTAGCTTTGGTGCTTACTTC558GTTGGGGTTAAAGGAAGGGAAGAAGAGTGAAGAGTGCAGAGAGATGATTA
Vigna angularis mRNA, clone: VES17D11.
HX948574.1:580-599
GGTGGAGGAGCTAGCTTTGGTGCTTACTTC580GTTGGGGTTAAAGGAAGGGAAGAAGAGTGAAGAGTGCAGAGAGATGATTA
Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
AP015034.1:56402954-56402973
GGTGGAGGAGCTAGCTTTGGTGCTTACTTC56402954GTTGGGGTTAAAGGAAGGGAAGAAGAGTGAAGAGTGCAGAGAGATGATTA
Vigna unguiculata cultivar Xiabao 2 chromosome Vu03.
CP039346.1:11405062-11405081
GGTGGAGGAACTAGCTTTGGTGCTTACATC11405062GTTGGGGTTAAAGGAAGGGAACAAGAGTGAAGAGTGCAGAGAGATGATTA
Vigna unguiculata cultivar Xiabao 2 chromosome Vu03.
CP039346.1:11412780-11412799
GGTGGAGGAACTAGCTTTGGTGCTTACATC11412780GTTGGGGTTAAAGGAAGGGAACAAGAGTGAAGAGTGCAGAGAGATGATTA
Pemphredon lugubris genome assembly, chromosome: 3.
OW121817.1:49866662-49866681
ACGGAGGGGGCCGGAGGGGGGGGGGGGGGG49866662GTTGGGGTTAAAGGAAGGGAGTGGTCTGTACGGGGGCGTAATCATCAAAG
Baccha elongata genome assembly, chromosome: 2.
OX578273.1:58512695-58512714
ATTATAAAAGAAGGTATAGACCTGTGTGTG58512695GTTGGGGTTAAAGGAAGGGATATAATGTCGTGCAGCAAAAGAAACGGGAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCCTTCCTTTAACCCCAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCCTTCCTTTAACCCCAAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.251 | 0.242 | search_plus_done; http://172.18.8.135:50400/match?q=TCCCTTCCTTTAACCCCAAC&k=0&no_gap=0&offset=0&limit=50
0.644 | 0.393 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGGGGTTAAAGGAAGGGA&k=0&no_gap=0&offset=0&limit=45
0.650 | 0.006 | cgi_end;

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