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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 05:40:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Thunnus maccoyii genome assembly, chromosome: 20.
OU343210.1:376958-376975
TTGATGACGGCGAGTTTTGACTCGCAGACT376958TCCTGCGAACAAACCTGCAGTCTGGACATCTGGATTCAGCCAAACACT
QCH2e11.yg QCH Zea mays cDNA clone QCH2e11, mRNA sequence.
CF038933.1:183-200
CCAGCTCAATTAGCTGATGTTTCTGATCAT183TCCTGCGAACAAACCTGCAGTTCCAAAGAAAACAATTCTGATGACATT
Arachis hypogaea cultivar Shitouqi chromosome A10.
CP030992.1:106203532-106203549
TGGAAGAAAATTCTCGACTTAGAGAACCTC106203532TCCTGCGAACAAACCTGCCCTACTACCAAGCTCAGGACAAAGAAAGAG
Coremacera marginata genome assembly, chromosome: 3.
OU612045.1:119698066-119698083
TTAACATATATAACATACCTAACATAGCGA119698066TCCTGCGAACAAACCTGCGAAGGTAAATTCTGCGGGTAAGCCTAAAAA
Sequence 5821 from Patent EP2051986.
HI290263.1:11-28
TTGCATGCCT11GCAGGTTTGTTCGCAGGAATGATCAGAAACATCAGCTAATTGAGCTGG
QCG11d11.yg QCG Zea mays cDNA clone QCG11d11, mRNA sequence.
CF034909.1:393-410
AATGTCATCAGAATTGTTTTCTTTGGAACT393GCAGGTTTGTTCGCAGGAATGATCAGAAACATCAGCTAATTGAGCTGG
QCG14f06.yg QCG Zea mays cDNA clone QCG14f06, mRNA sequence.
CF035151.1:345-362
AATGTCATCAGAATTGTTTTCTTTGGAACT345GCAGGTTTGTTCGCAGGAATGATCAGAAACATCAGCTAATTGAGCTGG
QCG38d12.yg QCG Zea mays cDNA clone QCG38d12, mRNA sequence.
CF036895.1:366-383
AATGTCATCAGAATTGTTTTCTTTGGAACT366GCAGGTTTGTTCGCAGGAATGATCAGAAACATCAGCTAATTGAGCTGG
QCH36d10.yg QCH Zea mays cDNA clone QCH36d10, mRNA sequence.
CF039426.1:366-383
AATGTCATCAGAATTGTTTTCTTTGGAACT366GCAGGTTTGTTCGCAGGAATGATCAGAAACATCAGCTAATTGAGCTGG
QCL19c08.yg QCL Zea mays cDNA clone QCL19c08, mRNA sequence.
CF048212.1:345-362
AATGTCATCAGAATTGTTTTCTTTGGAACT345GCAGGTTTGTTCGCAGGAATGATCAGAAACATCAACTAATTGAGCTGG
ii10f02.g1 WGS-ZmaysF (DH5a methyl filtered) Zea mays genomic clone ii10f02, genomic survey sequence.
BZ777487.1:230-247
AATGTCATCAGAATTGTTTTCTTTGGAACT230GCAGGTTTGTTCGCAGGAATGATCAGAAACATCAGCTAATTGAGCTGG
Zea mays cultivar B73 chromosome 1 clone ZMMBBb-230J4, *** SEQUENCING IN PROGRESS ***, 21 unordered pieces.
AC187481.5:59294-59311
AATGTCATCAGAATTGTTTTCTTTGGAACT59294GCAGGTTTGTTCGCAGGAATGATCAGAAACATCAGCTAATTGAGCTGG
Zea mays cultivar LT2357 chromosome 1.
CP116739.1:80078915-80078932
AATGTCATCAGAATTGTTTTCTTTGGAACT80078915GCAGGTTTGTTCGCAGGAATGATCAGAAACATCAGCTAATTGAGCTGG
Musa acuminata subsp. malaccensis isolate AA chromosome 8.
CP126377.1:12140597-12140614
TGATGGAACTGTGGAACCAAATGCCGAACC12140597GCAGGTTTGTTCGCAGGATTATTATGGTGATACTGATCTGATGTGTTT
Musa acuminata subsp. malaccensis isolate AA chromosome 19.
CP126388.1:12027692-12027709
TGATGGAACTGTGGAACCAAATGCCGAACC12027692GCAGGTTTGTTCGCAGGATTATTATGGTGATACTGATCTGATGTGTTT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A08.
HG996472.1:12063192-12063209
TGATGGAACTGTGGAACCAAATGCCGAACC12063192GCAGGTTTGTTCGCAGGATTATTATGGTGATACTGATCTGATGTGTTT
Zea mays genome assembly, chromosome: 1.
LR897967.1:82194431-82194448
AATGTCATCAGAATTGTTTTCTTTGGAACT82194431GCAGGTTTGTTCGCAGGAATGATCAGAAACATCAGCTAATTGAGCTGG
Musa schizocarpa genome assembly, chromosome: S08.
LS990922.1:12729694-12729711
TGATGGAACTGTGGAACCAATCGCCGAACC12729694GCAGGTTTGTTCGCAGGATTATTATGGTGATACTGATCTGATGTGTTT
Zeuzera pyrina genome assembly, chromosome: 15.
OU015632.1:1906752-1906769
GTACTATTTGTTCAATTTTCAAATTAAGGT1906752GCAGGTTTGTTCGCAGGATTTCGAATATGACATAATCGACGTTGAACT
Melinaea menophilus n. ssp. AW-2005 genome assembly, chromosome: 3.
OU911040.1:17748238-17748255
TTTGATAAATATACTAGCAGGTTGCTCGTT17748238GCAGGTTTGTTCGCAGGACGGCAAAAGTGATCAAACATTTTGTTTGAA
Leucoma salicis genome assembly, chromosome: 3.
OX411806.1:29423921-29423938
GTAGCAATCCTAATTCACAAGTACAATCCC29423921GCAGGTTTGTTCGCAGGACCACCGAAGGAATGTAACATAGTTCCAGTG
Zelleria hepariella genome assembly, chromosome: 4.
OX439382.1:13537778-13537795
TCAAGCAAGCAACGTACCTTATAAGGCTTC13537778GCAGGTTTGTTCGCAGGACTTGACAGGACAGGGTTGGATATGTGCCCC
Mythimna pallens genome assembly, chromosome: 17.
OY540841.1:22847961-22847978
ACTGTCTAGCTATCACGTTCTTCCAAGGCT22847961GCAGGTTTGTTCGCAGGAGTTACCTTATTCCTCGCAAATGTTAACTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCTGCGAACAAACCTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCTGCGAACAAACCTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.150 | 0.141 | search_plus_done; http://172.18.8.135:50400/match?q=TCCTGCGAACAAACCTGC&k=0&no_gap=0&offset=0&limit=50
0.423 | 0.273 | search_minus_done; http://172.18.8.135:50400/match?q=GCAGGTTTGTTCGCAGGA&k=0&no_gap=0&offset=0&limit=46
0.436 | 0.013 | cgi_end;

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