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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 05:37:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141959.1:26276948-26276965
AGAGAGAGAGAGAGAGAGAGAGAGAGAGGT26276948TCGACTTACTCCAATAGTAGCTGTTGGCTTGAAGGCTATTCTCATGTT
Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141976.1:25201071-25201088
AGAGAGAGAGAGAGAGAGAGAGAGAGAGGT25201071TCGACTTACTCCAATAGTAGCTGTTGGCTTGAAGGCTATTCTCATGTT
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143364.1:24797604-24797621
AGAGAGAGAGAGAGAGAGAGAGAGAGAGGT24797604TCGACTTACTCCAATAGTAGCTGTTGGCTTGAAGGCTATTCTCATGTT
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143381.1:24072884-24072901
TGTGTGTGTGTGAGAGAGAGAGAGAGAGGT24072884TCGACTTACTCCAATAGTAGCTGTTGGCTTGAAAGCTATTCTCATGTT
Malus sylvestris genome assembly, chromosome: 7.
OU696509.1:25244751-25244768
AGAGAGAGAGAGAGAGAGAGAGAGAGAGGT25244751TCGACTTACTCCAATAGTAGCTGTTGGCTTGAAGGCTATTCTCATGTT
Malus domestica genome assembly, chromosome: 7.
OU696683.1:24526740-24526757
TGAGAGAGAGAGAGAGAGAGAGAGAGAGGT24526740TCGACTTACTCCAATAGTAGCTGTTGGCTTGAAGGCTATTCTCATGTT
Malus domestica genome assembly, chromosome: 7.
OU744548.1:25715089-25715106
AGAGAGAGAGAGAGAGAGAGAGAGAGAGGT25715089TCGACTTACTCCAATAGTAGCTGTTGGCTTGAAGGCTATTCTCATGTT
Malus domestica genome assembly, chromosome: 7.
OU744959.1:24508395-24508412
TGTGAGAGAGAGAGAGAGAGAGAGAGAGGT24508395TCGACTTACTCCAATAGTAGCTGTTGGCTTGAAGGCTATTCTCATGTT
Malus domestica genome assembly, chromosome: 7.
OU744997.1:24816828-24816845
AGAGAGAGAGAGAGAGAGAGAGAGAGAGGT24816828TCGACTTACTCCAATAGTAGCTGTTGGCTTGAAGGCTATTCTCATGTT
Crataegus laevigata genome assembly, chromosome: 10.
OY756947.1:27750304-27750321
TGTGTGTGTGAGAGAGAGAGAGAGAGAGGT27750304TCGACTTACTCCAATAGTAGCTGTTGGCTTGAAGGCTATTCTCATGTT
Pyrus communis genome assembly, chromosome: 5.
OY757072.1:21494834-21494851
AGACAGAGAGAGAGAGAGAGAGAGAGAGGT21494834TCGACTTACTCCAATAGTAGCTGTTGGCTTGAAGGCTATTCTCATGTT
Phragmatobia fuliginosa genome assembly, chromosome: 6.
OW052063.1:13490357-13490374
CGGGTAAGAAGAAATAAAGATGATATTGCA13490357TCGACTTACTCCAATAGTGAGATAAAGAATATTCTGTGAAGATGCATT
Heterobilharzia americana genome assembly, chromosome: 1.
OX104103.1:9848471-9848488
ACCTAAGTTCTTCATATCTTTGCACCCCCG9848471TCGACTTACTCCAATAGTTCACTTTTCTTTGCCTTTTACTCACATAAA
Heterobilharzia americana genome assembly, chromosome: 1.
OX104127.1:10013207-10013224
ACCTAAGTTCTTCATATCTTTGCACCCCCG10013207TCGACTTACTCCAATAGTTCACTTTTCTTTGCCTTTTACTCACATAAA
Acleris cristana genome assembly, chromosome: 15.
OX411787.1:6355210-6355227
ACAAGGGAATTCGTTAAAAATCTTTAAACA6355210TCGACTTACTCCAATAGTAAGACAGCTATATGTGGTAAATTATGTAAT
Deilephila elpenor genome assembly, chromosome: 26.
OX457120.1:6357962-6357979
GCATTTAAAACAAAACATGCTAAGTCTCGT6357962TCGACTTACTCCAATAGTTATATCCTGAAACATATTATAAATAAGTAT
Megamerina dolium genome assembly, chromosome: 5.
OY978529.1:70190565-70190582
AAGCAATAGTGGTACTACATACAATAACAA70190565TCGACTTACTCCAATAGTTCGATAAGTTCGAGTTGCAACAATTCCATG
Malus x domestica clone MS06C09 microsatellite sequence.
AY861482.1:50-67
AACATGAGAATAGCCTTCAAGCCAACAGCT50ACTATTGGAGTAAGTCGAACCTCTCTCTCTCTCTCTCTCTCTCTCACA
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141916.1:11011337-11011354
AACATGAGAATAGCCTTCAAGCCAACAGCT11011337ACTATTGGAGTAAGTCGAACCTCTCTCTCTCTCTCTCTCTCTCACACA
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141933.1:11167428-11167445
AACATGAGAATAGCCTTCAAGCCAACAGCT11167428ACTATTGGAGTAAGTCGAACCTCTCTCTCTCTCTCTCTCTCTCTCTCT
Malus x robusta genome assembly, chromosome: 10.
OY720334.1:10022187-10022204
AACATGAGAATAGCCTTCAAGCCAACAGCT10022187ACTATTGGAGTAAGTCGAACCTCTCTCTCTCTCTCTCTCTCTCTCTCT
Lathyrus aphaca genome assembly, chromosome: 4.
OZ014522.1:388786709-388786726
TTATGATTATGGAGTAAGTTAAAAAGATTT388786709ACTATTGGAGTAAGTCGATCCCCACTATATATATATATATATATATAT
Mamestra brassicae genome assembly, chromosome: 24.
LR991011.1:668474-668491
AAGTTGAGTCGAGAGGAGAAAATTACTTTG668474ACTATTGGAGTAAGTCGACCGTCCATTGCTAGTTTGCTATACTGCCGA
Furcula furcula genome assembly, chromosome: 12.
OU452254.1:16026870-16026887
TATTTAAATCCACGTAAATGACCATCCGTG16026870ACTATTGGAGTAAGTCGATTCGACTAATACTTAATAATAATAATAAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCGACTTACTCCAATAGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCGACTTACTCCAATAGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.092 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=TCGACTTACTCCAATAGT&k=0&no_gap=0&offset=0&limit=50
0.144 | 0.051 | search_minus_done; http://172.18.8.135:50400/match?q=ACTATTGGAGTAAGTCGA&k=0&no_gap=0&offset=0&limit=33
0.148 | 0.004 | cgi_end;

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