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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-17 09:32:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 6, clone: LjB23G22, BM1714.
AP010555.1:8354-8373
TATCATTTAGTACATGAGAATTTAGTTAAG8354TCTCTTCGATCGAATTTTCAATATATATATATATATATATATATATTTAT
Lotus japonicus genomic DNA, chromosome 6, clone: LjB02L14, BM1999.
AP010556.1:41047-41066
TATCATTTAGTACATGAGAATTTAGTTAAG41047TCTCTTCGATCGAATTTTCAATATATATATATATATATATATATATTTAT
Vibrio sp. SNU_ST1 chromosome 1, complete sequence.
CP130748.1:606442-606461
ACTCTTGCAATTGGTTAACGATGTTTGATG606442TCTCTTCGATCGAATTTTCAACTTTTTGTGATATATCATCTGATGCATCG
Netelia virgata genome assembly, chromosome: 6.
OX637868.1:3581682-3581701
AAAGAACAAACAAATTTTTGCACGCGAAAC3581682TCTCTTCGATCGAATTTTCATCGATTTCTCGAGATCCAGAAAAAAAAACG
Lotus japonicus DNA, clone:LjT57o11_not.
AG263450.1:495-514
ATAAATATATATATATATATATATATATAT495TGAAAATTCGATCGAAGAGACTTAACTAAATTCTCATGTACTAAATGATA
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:1192865-1192884
ATATATATATATATATATATATATATATAT1192865TGAAAATTCGATCGAAGAGACTTAACTAAATTCTCATGTACTAAATGATA
Ischnura elegans genome assembly, chromosome: 2.
OV121101.1:125658001-125658020
TTTTATTTAATTCACGAAGCTGTAACTCGA125658001TGAAAATTCGATCGAAGAGACCCTTGAATATTGACTGTGCGGGGAAACAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTCTTCGATCGAATTTTCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTCTTCGATCGAATTTTCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCTTCGATCGAATTTTCA&k=0&no_gap=0&offset=0&limit=50
0.126 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=TGAAAATTCGATCGAAGAGA&k=0&no_gap=0&offset=0&limit=46
0.128 | 0.002 | cgi_end;

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