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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-14 21:50:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

sa33e09.x1 Gm-c1004 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1004-1121 3' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
AI443558.1:293-312
AAACCAGAATTCCTTCTTCGCCCTTGGCAT293TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
sf30e09.x1 Gm-c1028 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1028-1505 3' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
AW310071.1:285-304
AAACCAGAATTCCTTCTTCACCCTTGGCAT285TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
GM210002B22F3 Gm-r1021 Glycine max cDNA clone Gm-r1021-654 3', mRNA sequence.
AW348611.1:215-234
AAACCAGAATTCCTTCTTCGCCCTTGGCAT215TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
GM210006B10A5 Gm-r1021 Glycine max cDNA clone Gm-r1021-1953 3', mRNA sequence.
AW349958.1:129-148
AAACCAGAATTCCTTCTTCGCCCTTGGCAT129TCTGACTCGGCACATGAAAGTTTGCCGCGAGGAAAGCACCAGCACCAGCA
GM210009A10A2 Gm-r1021 Glycine max cDNA clone Gm-r1021-3075 3', mRNA sequence.
AW350546.1:240-259
AAACCAGAATTCCTTCTTCGCCCTTGGCAT240TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
so59c10.y1 Gm-c1039 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1039-2251 5' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
BE211229.1:187-206
AAACCAGAATTCCTTCTTCGCCCTTGGCAT187TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
GM830003B22E10 Gm-r1083 Glycine max cDNA clone Gm-r1083-1004 3', mRNA sequence.
BI967957.1:187-206
AAACCAGAATTCCTTCTTCGCCCTTGGCAT187TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
GM830009A11D04 Gm-r1083 Glycine max cDNA clone Gm-r1083-3223 3', mRNA sequence.
BI969772.1:248-267
AAACCAGAATTCCTTCTTCACCCTTGGCAT248TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
Gm_ck8420 Soybean induced by Salicylic Acid Glycine max cDNA 3', mRNA sequence.
CD417626.1:287-306
AAACCAGAATTCCTTCTTCGCCCTTGGCAT287TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
GM89012B1E10.r1 Gm-r1089 Glycine max cDNA clone Gm-r1089-4459 3, mRNA sequence.
CO981849.1:181-200
AAACCAGAATTCCTTCTTCGCCCTTGGCAT181TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
GM89024A2A04.r1 Gm-r1089 Glycine max cDNA clone Gm-r1089-8840 3, mRNA sequence.
CO985372.1:135-154
AAACCAGAATTCCTTCTTCGCCCTTGGCAT135TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
gmrtDrNS01_16-A_M13R_B06_046.s2 Water stressed 5h segment 2 gmrtDrNS01 Glycine max cDNA 3', mRNA sequence.
CX547944.1:256-275
AAACCAGAATTCCTTCTTCGCCCTTGGCAT256TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
gmrtDrNS01_19-B_M13R_B01_013.s2 Water stressed 5h segment 2 gmrtDrNS01 Glycine max cDNA 3', mRNA sequence.
CX703651.1:257-276
AAACCAGAATTCCTTCTTCGCCCTTGGCAT257TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
gmrtDrNS01_23-B_M13R_D05_041.s2 Water stressed 5h segment 2 gmrtDrNS01 Glycine max cDNA 3', mRNA sequence.
CX704036.1:220-239
AAACCAGAATTCCTTCTTCGCCCTTGGCAT220TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
GLRA309TR JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
FK021781.1:259-278
AAACCAAAATTCCTTCTTCCCCCTTGGCAT259TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGC
Kudzu-Sub-20_2008-04-09_1/Kudzu-Sub-20_H24_090_1 Kudzu subtraction cDNA library Pueraria montana var. lobata cDNA, mRNA sequence.
HO708696.1:275-294
AAACCAAAAGACCTTCCTCTCCCTTAGCAT275TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCCCCTGCACCAGCA
Kudzu-Sub-20_2008-04-09_1/Kudzu-Sub-20_N03_004_1 Kudzu subtraction cDNA library Pueraria montana var. lobata cDNA, mRNA sequence.
HO708810.1:274-293
AAACCAAAAGACCTTCCTCTCCCTTAGCAT274TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCCCCTGCACCAGCA
17051 Glycine max young leaves DNA Glycine max STS genomic, sequence tagged site.
GF097311.1:178-197
AAACCAAAATTCCTTCTTCGCCCTTGGCAT178TCTGACTCGGCACATGAAAGTTCACCGCAGGGA
Soybean clone JCVI-FLGm-26D22 unknown mRNA.
BT099010.1:259-278
AAACCAAAATTCCTTCTTCCCCCTTGGCAT259TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
Glycine max cultivar Williams 82 chromosome 10.
CP126435.1:43051376-43051395
AAACCAGAATTCCTTCTTCGCCCTTGGCAT43051376TCTGACTCGGCACATGAAAGTTCACCGCAGGGAAAGCACCAGCACCAGCA
Alsophila aescularia genome assembly, chromosome: Z.
OX276373.1:57720285-57720304
GGTATTTCGTTTGCCTGTGCGAGATTAAAC57720285TCTGACTCGGCACATGAAAGAGAAACTTCCTTTTTAAACTCAAAGCAAAC
Alsophila aescularia genome assembly, chromosome: 1.
OX276374.1:27916364-27916383
CAGAAGGATATTCCCTTTTCCTGCGCGAGA27916364TCTGACTCGGCACATGAAAGGAAAAGTTATTTTTCAAGCTCAAAGTACAG
Alsophila aescularia genome assembly, chromosome: 6.
OX276379.1:35812948-35812967
GGTATTTCCTTTTCCAGTGTGAGATTCAAC35812948TCTGACTCGGCACATGAAAGGGAAATTTCCTTTACAAACTCAAAGCATAC
Alsophila aescularia genome assembly, chromosome: 10.
OX276383.1:23519105-23519124
GGTTTTTCCTTTTCTTGTGTGAGATTCTAA23519105TCTGACTCGGCACATGAAAGGGAAATTTCTTTTTCAAATTTAAAGCATAC
Alsophila aescularia genome assembly, chromosome: 13.
OX276386.1:39437073-39437092
CGTTTTTCCTTTTCTTGTGTGAGATTCAAC39437073TCTGACTCGGCACATGAAAGGGAAATTTCCTTTTCATACTCAAAGTATAC
Sequence 105 from Patent WO2011023571.
JA169992.1:1239-1258
TGCTGGTGCTGGTGCTTTCCCTGCGGTGAA1239CTTTCATGTGCCGAGTCAGAATGCCAAGGGCGAAGAAGGAATTCTGGTTT
Sequence 107 from Patent WO2011023571.
JA169994.1:1239-1258
TGCTGGTGCTGGTGCTTTCCCTGCGGTGAA1239CTTTCATGTGCCGAGTCAGAATGCCAAGGGCGAAGAAGGAATTCTGGTTT
sa96g04.y1 Gm-c1004 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1004-7183 5' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
AI494813.1:94-113
TGCTGGTGCTGGTGCTTTCCCTGCGGTGAA94CTTTCATGTGCCGAGTCAGAATGCCAAGGGCGAAGAAGGAATTCTGGTTT
sf22a08.y1 Gm-c1028 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1028-687 5' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
AW234169.1:81-100
TGCTGGTGCTGGTGCTTTCCCTGCGGTGAA81CTTTCATGTGCCGAGTCAGAATGCCAAGGGTGAAGAAGGAATTCTGGTTT
sf15a08.y1 Gm-c1028 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1028-15 5' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
AW234505.1:81-100
TGCTGGTGCTGGTGCTTTACCTGCGGTGAA81CTTTCATGTGCCGAGTCAGAATGCCAAGGGTGAAGAAGGAATTCTGGTTT
saa49e12.y1 Gm-c1060 Glycine soja cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1060-215 5' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
BG046171.1:160-179
TGCTGGTGCTGGTGCTTTCCCTGCGGTGAA160CTTTCATGTGCCGAGTCAGAATGCCAAGGGCGAAGAAGGAATTCTGGTTG
sag10g06.y1 Gm-c1080 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1080-708 5' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
BI427051.1:437-456
TGCTGGTGCTGGTGCTTTCCCTGCGGTGAA437CTTTCATGTGCCGAGTCAGAATGCCAAGGGTGAAGAAGGAATTCTGGTTT
sag37d04.y1 Gm-c1081 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1081-943 5' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
BI699474.1:118-137
TGCTGGTGCTGGTGCTTTCCCTGCGGTGAA118CTTTCATGTGCCGAGTCAGAATGCCAAGGGTGAAGAAGGAATTCTGGTTT
sas36f07.y1 Gm-c1080 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1080-6014 5' similar to TR:Q43583 Q43583 HSR201 PROTEIN, mRNA sequence.
BU763048.1:363-382
TGCTGGTGCTGGTGCTTTCCCTGCGGTGAA363CTTTCATGTGCCGAGTCAGAATGCCAAGGGTGAAGAAGGAATTCTGGTTT
Glycine max cDNA, clone: GMFL02-01-P19, 3'end.
DB974279.1:375-394
TGCTGGTGCTGGTGCTTTCCCTGCGGTGAA375CTTTCATGTGCCGAGTCAGAATGCCAAGGGCGAAGAAGGAATTCTGGTTT
three-D6.txt SSH cDNA library induced by salt from soybean Glycine max cDNA, mRNA sequence.
HO760415.1:196-215
TGCTGGTGCTGGTGCTTTCCCTGCGGTGAA196CTTTCATGTGCCGAGTCAGAATGCCAAGGGCGAAGAAGGAATTCTGGTTT
Alsophila aescularia genome assembly, chromosome: 3.
OX276376.1:62746413-62746432
ACTAGATAAACTAAGTATAAAGGAAGCCCC62746413CTTTCATGTGCCGAGTCAGAGTTGAATCTCGCACAGGAAAAGGAAAAACC
Alsophila aescularia genome assembly, chromosome: 6.
OX276379.1:23856989-23857008
AGTATGCTTTGAAATGAAAAGGAAATTTCC23856989CTTTCATGTGCCGAGTCAGAGTTGAATCTCGCACAGGGAAAGTAAATGCC
Alsophila aescularia genome assembly, chromosome: 7.
OX276380.1:6655521-6655540
GCATGCTTTGAGTTTGAAAAGGAAATTTCC6655521CTTTCATGTGCCGAGTCAGAGTTGAATCTCGCACAGGAAAAGGAAATACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTGACTCGGCACATGAAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTGACTCGGCACATGAAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.703 | 0.694 | search_plus_done; http://172.18.8.135:50400/match?q=TCTGACTCGGCACATGAAAG&k=0&no_gap=0&offset=0&limit=50
1.030 | 0.328 | search_minus_done; http://172.18.8.135:50400/match?q=CTTTCATGTGCCGAGTCAGA&k=0&no_gap=0&offset=0&limit=25
1.040 | 0.009 | cgi_end;

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