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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-04 07:43:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Argentina silus genome assembly, chromosome: X.
OX637366.1:36297653-36297672
GTTGTCAAGGATCACCAAAATTCTTGGCTG36297653TCTGGGAGATTACAGTGGAGTTCTCTACTATGTAGAGTTCTCTACTGTGA
Sequence 17960 from patent US 7750207.
GX323885.1:553-572
GGCCGTGGAATGAGATGGAGTTCGGGTTTT553TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
EL2754F Brassica embryo library (EL) Brassica napus cDNA clone EL2754 3', mRNA sequence.
CN828212.1:493-512
GGCCGTGGAATGAGATGGAGTTCGGGTTTT493TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
OL1321F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL1321, mRNA sequence.
EH414395.1:487-506
GGCCGTGGAATGAGATGGAGTTCGGGTTTT487TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
OL2423F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL2423, mRNA sequence.
EH416596.1:463-482
GGCCGTGGAATGAGATGGAGTTCGGGTTTT463TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
OL283F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL283, mRNA sequence.
EH417441.1:477-496
GGCCGTGGAATGAGATGGAGTTCGGGTTTT477TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
OL3385F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL3385, mRNA sequence.
EH418537.1:471-490
GGCCGTGGAATGAGATGGAGTTCGGGTTTT471TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
OL347F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL347, mRNA sequence.
EH418714.1:485-504
GGCCGTGGAATGAGATGGAGTTCGGGTTTT485TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
OL5077F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL5077, mRNA sequence.
EH421650.1:549-568
GGCCGTGGAATGAGATGGAGTTCGGGTTTT549TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
OL5280F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL5280, mRNA sequence.
EH422006.1:476-495
GGCCGTGGAATGAGATGGAGTTCGGGTTTT476TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
OL6698F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL6698, mRNA sequence.
EH424785.1:504-523
GGCCGTGGAATGAGATGGAGTTCGGGTTTT504TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
OL6962F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL6962, mRNA sequence.
EH425295.1:432-451
GGCCGTGGAATGAGATGGAGTTCGGGTTTT432TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
OL7571F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL7571, mRNA sequence.
EH426336.1:478-497
GGCCGTGGAATGAGATGGAGTTCGGGTTTT478TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
OL8644F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL8644, mRNA sequence.
EH428476.1:454-473
GGCCGTGGAATGAGATGGAGTTCGGGTTTT454TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
OL8847F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL8847, mRNA sequence.
EH428878.1:465-484
GGCCGTGGAATGAGATGGAGTTCGGGTTTT465TCTGGGAGATTACAGTGGAGAAAATTAAGGGTGTGAGCAAAGCAGATGCG
OL8876F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL8876, mRNA sequence.
EH428925.1:434-453
GGCCGTGGAATGAGATGGAGTTCGGGTTTT434TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
0203413 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence.
EV137487.1:505-524
GGCCGTGGAATGAGATGGAGTTCGGGTTTT505TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
0203903 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence.
EV137977.1:506-525
GGCCGTGGAATGAGATGGAGTTCGGGTTTT506TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
0152135 Brassica napus Etiolated seedlings (Uni-ZAP) Brassica napus cDNA, mRNA sequence.
EV171443.1:644-663
GGCCGTGGAATGAGATGGAGTTCGGGTTTT644TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
0152544 Brassica napus Etiolated seedlings (pSPORT1) Brassica napus cDNA, mRNA sequence.
EV180755.1:479-498
GGCCGTGGAATGAGATGGAGTTTGGGTTTT479TCTGGGAGATTACAGTGGAGAAAGTTGTGGGTGTGAGCAAAGCAGATGCG
0101688 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV200535.1:558-577
GGCCGTGGAATGAGATGGAGTTCGGGTTTT558TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
0102298 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV201145.1:538-557
GGCCGTGGAATGAGATGGAGTTCGGGTTTT538TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
0171289 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV204108.1:665-684
GGCCGTGGAATGAGATGGAGTTTGGGTTTT665TCTGGGAGATTACAGTGGAGAAAGTTGTGGGTGTGAGCAAAGCAGATGCC
0179909 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV209566.1:680-699
GGCCGTGGAATGAGATGGAGTTTGGGTTTT680TCTGGGAGATTACAGTGGAGAAAGTGTGGGTGTGAGCAAAGCAGATGCGC
0188488 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV215573.1:613-632
GGCCGTGGAATGAGATGGAGTTCGGGTTTT613TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
0188846 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV215735.1:610-629
GGCCGTGGAATGAGATGGAGTTCGGGTTTT610TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
1106514774259 Cryptosporidium muris (strain RN66) cDNA library, stage oocyst Cryptosporidium muris RN66 cDNA clone 1061039178421, mRNA sequence.
FD409958.1:515-534
GGCCGTGGAATGAGATGGAGTTCGGGTTTT515TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF04G14, 3'-end sequence.
FY069574.1:451-470
GGCCGTGGAATGAGATGGAGTTTGGGTTTT451TCTGGGAGATTACAGTGGAGAAAGTTGT
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF07K06, 3'-end sequence.
FY070692.1:473-492
GGCCGTGGAATGAGATGGAGTTTGGGTTTT473TCTGGGAGATTACAGTGGAGAAAGTTGTGGGTGTGAGCAGAGCAGATGCG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF07P15, 3'-end sequence.
FY070808.1:517-536
GGCCGTGGAATGAGATGGAGTTTGGGTTTT517TCTGGGAGATTACAGTGGAGAAAGTTGTGGGTGTGAGCAGAGCAGATGCG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF13F18, 3'-end sequence.
FY072727.1:462-481
GGCCGTGGAATGAGATGGAGTTTGGGTTTT462TCTGGGAGATTACAGTGGAGAAAGTTGTGGGTGTGAGCAGAGCAGATGCG
Brassica rapa subsp. pekinensis mRNA, clone: BBRAF31L20, 3'-end sequence.
FY423407.1:450-469
GGCCGTGGAATGAGATGGAGTTTGGGTTTT450TCTGGGAGATTACAGTGGAGAAAGTTGTGGGTGTGAGCAGAGCAGATGCG
0259263 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO946914.1:576-595
GGCCGTGGAATGAGATGGAGTTTGGGTTTT576TCTGGGAGATTACAGTGGAGAAAGTTGTGGGTGTGAGCAGAGCAGATGCG
0268696 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO961834.1:531-550
GGCCGTGGAATGAGATGGAGTTTGGGTTTT531TCTGGGAGATTACAGTGGAGCGGACGCGTGGGTCGACCCGGGAATTCCGG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH001D10, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC189531.2:69115-69134
GGCCGTGGAATGAGATGGAGTTTGGGTTTT69115TCTGGGAGATTACAGTGGAGAAAGTTGTGGGTGTGAGCAGAGCAGATGCG
Brassica napus cultivar Xiang5A chromosome 12.
CP123887.1:26910684-26910703
GGCCGTGGAATGAGATGGAGTTCGGGTTTT26910684TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
Brassica napus genome assembly, chromosome: C06.
HG994370.1:20604129-20604148
GGCCGTGGAATGAGATGGAGTTCGGGTTTT20604129TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
Brassica oleracea HDEM genome, scaffold: C6.
LR031880.1:17591752-17591771
GGCCGTGGAATGAGATGGAGTTCGGGTTTT17591752TCTGGGAGATTACAGTGGAGAAAGTTGAGGGTGTGAGCAAAGCAGATGCG
Haemonchus contortus strain NZ_Hco_NP chromosome 2.
CP035801.1:5091696-5091715
TACCCGTTTTTCATTCTCAGTGACCCCTCA5091696TCTGGGAGATTACAGTGGAGGCGGAGTCTTATATCCGATATCCTATGTAT
BN20.051P24F011221 BN20 Brassica napus cDNA clone BN20051P24, mRNA sequence.
CD820307.1:105-124
CGCATCTGCTTTGCTCACACCCACAACTTT105CTCCACTGTAATCTCCCAGAAAAACCCAAACTCCATCTCATTCCACGGCC
11FGYSDB_UP_002_C10_16OCT2003_076 Brassica seedling 11FGYSDB Brassica napus cDNA 5', mRNA sequence.
CN729239.1:72-91
CGCATCTGCTTTGCTCACACCCTCAACTTT72CTCCACTGTAATCTCCCAGAAAAACCCGAACTCCATCTCATTCCACGGCC
EL2754R Brassica embryo library (EL) Brassica napus cDNA clone EL2754 5', mRNA sequence.
CN828213.1:98-117
CGCATCTGCTTTGCTCACACCCTCAACTTT98CTCCACTGTAATCTCCCAGAAAAACCCGAACTCCATCTCATTCCACGGCC
Brassica rapa subsp. pekinensis mRNA, clone: BRest02-O09, 5'-end sequence.
DC844546.1:56-75
CGCATCTGCTCTGCTCACACCCACAACTTT56CTCCACTGTAATCTCCCAGAAAAACCCAAACTCCATCTCATTCCACGGCC
Brassica oleracea var. viridis mRNA, clone: KALE-090J22, 5' end sequence.
DK490203.1:75-94
CGCATCTGCTTTGCTCACACCCTCAACTTT75CTCCACTGTAATCTCCCAGAAAAACCCGAACTCCATCTCATTCCACGGCC
Brassica oleracea var. viridis mRNA, clone: KALE-106P08, 5' end sequence.
DK496457.1:73-92
CGCATCTGCTTTGCTCACACCCTCAACTTT73CTCCACTGTAATCTCCCAGAAAAACCCGAACTCCATCTCATTCCACGGCC
Brassica oleracea var. viridis mRNA, clone: KALE-090J22, 3' end sequence.
DK549784.1:75-94
CGCATCTGCTTTGCTCACACCCTCAACTTT75CTCCACTGTAATCTCCCAGAAAAACCCGAACTCCATCTCATTCCACGGCC
Brassica oleracea var. viridis mRNA, clone: KALE-106P08, 3' end sequence.
DK556035.1:73-92
CGCATCTGCTTTGCTCACACCCTCAACTTT73CTCCACTGTAATCTCCCAGAAAAACCCGAACTCCATCTCATTCCACGGCC
BNDH2DCT_UP_001_F11_09JUN2004_085 Brassica napus seeds BNDH2DCT Brassica napus cDNA 5', mRNA sequence.
DW997137.1:109-128
CGCATCTGCTTTGCTCACACCCTCAACTTT109CTCCACTGTAATCTCCCAGAAAAACCCGAACTCCATCTCATTCCACGGCC
34ETGS48_UP_014_A08_11FEB2005_064 Brassica napus 34ETGS48 Brassica napus cDNA 5', mRNA sequence.
EE430252.1:105-124
CGCATCTGCTTTGCTCACACCCACAACTTT105CTCCACTGTAATCTCCCAGAAAAACCCAAACTCCATCTCATTCCACGGCC
BNBS6DCT_UP_016_H12_13APR2005_082 Brassica napus seeds BNBS6DCT Brassica napus cDNA 5', mRNA sequence.
EE457104.1:65-84
CGCATCTGCTTTGCTCACACCCTCAACTTT65CTCCACTGTAATCTCCCAGAAAAACCCGAACTCCATCTCATTCCACGGCC
KBrB003C02F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB003C02, genomic survey sequence.
DX012278.1:439-458
CGCATCTGCTCTGCTCACACCCACAACTTT439CTCCACTGTAATCTCCCAGAAAAACCCAAACTCCATCTCATTCCACGGCC
KBrB057G16F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB057G16, genomic survey sequence.
DX053500.1:428-447
CGCATCTGCTCTGCTCACACCCACAACTTT428CTCCACTGTAATCTCCCAGAAAAACCCAAACTCCATCTCATTCCACGGCC
Brassica napus cultivar Xiang5A chromosome 17.
CP123892.1:9454376-9454395
CGCATCTGCTCTGCTCACACCCACAACTTT9454376CTCCACTGTAATCTCCCAGAAAAACCCAAACTCCATCTCATTCCACGGCC
Brassica napus genome assembly, chromosome: A05.
HG994359.1:9456414-9456433
CGCATCTGCTTTGCTCACACCCACAACTTT9456414CTCCACTGTAATCTCCCAGAAAAACCCAAACTCCATCTCATTCCACGGCC
Brassica rapa genome, scaffold: A05.
LR031570.1:15229238-15229257
CGCATCTGCTTTGCTCACACCCACAACTTT15229238CTCCACTGTAATCTCCCAGAAAAACCCAAACTCCATCTCATTCCACGGCC
Brassica rapa genome assembly, chromosome: A05.
LS974621.2:9338720-9338739
CGCATCTGCTTTGCTCACACCCACAACTTT9338720CTCCACTGTAATCTCCCAGAAAAACCCAAACTCCATCTCATTCCACGGCC
Metalampra italica genome assembly, chromosome: 5.
OX452974.1:5936796-5936815
ACTTATCTCTCCATGTAAGACCCCAAACGA5936796CTCCACTGTAATCTCCCAGACATTTAATTTCATCGTTTTAAATGAATCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTGGGAGATTACAGTGGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTGGGAGATTACAGTGGAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
2.288 | 2.280 | search_plus_done; http://172.18.8.135:50400/match?q=TCTGGGAGATTACAGTGGAG&k=0&no_gap=0&offset=0&limit=50
3.005 | 0.717 | search_minus_done; http://172.18.8.135:50400/match?q=CTCCACTGTAATCTCCCAGA&k=0&no_gap=0&offset=0&limit=11
3.016 | 0.011 | cgi_end;

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