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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 02:15:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Daucus carota subsp. sativus cultivar DH1 chromosome 7.
CP093349.1:39000557-39000576
ATTTGTATACTCAGGATTACAAGCATCTGA39000557TCTTGCATACCATTCAGCCACGGGCAAACATATTATTTCGCATCACCTTC
Daucus carota isolate Kuroda chromosome 7.
CP125307.1:39063535-39063554
ATTTGTATACTCAGGATTACAAGCATCTGA39063535TCTTGCATACCATTCAGCCACGGGCAAACATATTATTTCGCATCACCTTC
Branchellion lobata genome assembly, chromosome: 6.
OX387251.1:1273636-1273655
TGTTTATGGGGGCTTTCAGTGGCTTGTGTG1273636TCTTGCATACCATTCAGCCAGGCCGCAAAACCATTCCCCCTCCCCCCCCC
Volucella bombylans genome assembly, chromosome: 1.
OX422140.1:19962920-19962939
GAATTTACAATTTAATGCCAAGCTTTTGAC19962920TCTTGCATACCATTCAGCCACGGTTTCATTGTCGTTTTTAACCGAAGAGA
Volucella bombylans genome assembly, chromosome: 2.
OX422141.1:114729404-114729423
GAATTTACAATTTAATGCCAAGCTTTTGAC114729404TCTTGCATACCATTCAGCCACGGTTTCATTGTCGTTTTTAACCGAAGAGA
Volucella bombylans genome assembly, chromosome: 3.
OX422142.1:133619531-133619550
TAATTTACAATTTAATGCCAAGCTTTTGAC133619531TCTTGCATACCATTCAGCCACTGTTTCATTGTCGTTTTTAACCGAAGAGA
Volucella bombylans genome assembly, chromosome: 4.
OX422143.1:8838611-8838630
GAATTTACAATTTAATGCCTAGCTTTTGAC8838611TCTTGCATACCATTCAGCCACGAAGATAAAAACTTTTTTCTTTCGCGAAA
Volucella bombylans genome assembly, chromosome: 4.
OX422143.1:15933534-15933553
GAATTTACAATTTAATGCCAAGCTTTTGAC15933534TCTTGCATACCATTCAGCCACGGTTTCATTGTCGTTTTTAACCGAAGAGA
Volucella bombylans genome assembly, chromosome: 4.
OX422143.1:183879994-183880013
GAATTTACAATTTAATGCCAAGCTTTTGAC183879994TCTTGCATACCATTCAGCCACGGTTTCATTGTCGTTTTTAAACGAAGAGA
Ctenicera cuprea genome assembly, chromosome: 10.
OY284495.1:38544170-38544189
TCTGGATAATCTTGTTTGATCACAGTCACC38544170TCTTGCATACCATTCAGCCATGGCGTGCATGATGATATGCTTGATATTGA
Pasiphila rectangulata genome assembly, chromosome: 3.
OY720238.1:16224433-16224452
AAAAATAAAGCTTTTTAAAGTAGAGGGTAT16224433TCTTGCATACCATTCAGCCAACTCGTTTGTAATGGTTAAGGAATGTATTA
Trichobilharzia regenti genome assembly, chromosome: 1.
OX235262.1:88815586-88815605
GAATTCATGGGACATTGAATCGGGTCCCAG88815586TGGCTGAATGGTATGCAAGATTGCTTGTAACCGGAAGGTCCTGGGTTCGA
Volucella bombylans genome assembly, chromosome: 1.
OX422140.1:96056526-96056545
TATCTTCGGTTAAAAACGACAATGAAATCG96056526TGGCTGAATGGTATGCAAGAGTCAAAAGCTTGGCATTAAATTGTAAATTC
Volucella bombylans genome assembly, chromosome: 2.
OX422141.1:70109745-70109764
TCTCTTCGGTTAAAAACGATAATGAAACCG70109745TGGCTGAATGGTATGCAAGAGTCAAAAGCTTGGCATTAAATTGTAAATTC
Volucella bombylans genome assembly, chromosome: 2.
OX422141.1:96483167-96483186
TCTCTTCGGTTAAAAACGACAATGAAACCG96483167TGGCTGAATGGTATGCAAGAGTCAAAAGCTTGGCATTAAATTGTAAATTC
Volucella bombylans genome assembly, chromosome: 3.
OX422142.1:139916588-139916607
TCTCTTCAGTTAAAAACGACAATGAAACCG139916588TGGCTGAATGGTATGCAAGAGTCAAAAGCTTGGCATTAAATTATAAATTC
Volucella bombylans genome assembly, chromosome: 4.
OX422143.1:50549021-50549040
TCTCTTCGGTTAAAAACGACAATGAAACCG50549021TGGCTGAATGGTATGCAAGAGTCAAAAGCTTGGCATTAAATTGTAAATTC
Volucella bombylans genome assembly, chromosome: 5.
OX422144.1:163796788-163796807
TCTCTTCGGTTAAAAACGACAATGAAACCG163796788TGGCTGAATGGTATGCAAGAGTCAAAAGCTTGGCATTAAATTGTAAATTC
Volucella bombylans genome assembly, chromosome: 5.
OX422144.1:169438329-169438348
TCTCTTCGGTTAAAAACGACAATGAAACCG169438329TGGCTGAATGGTATGCAAGAGTCAAAAGCTTGGCATTAAATTGTAAATTC
Hemicrepidius niger genome assembly, chromosome: 4.
OY720162.1:23383571-23383590
TTAACATCAAGCATATCATCATGCATGCCA23383571TGGCTGAATGGTATGCAAGAGGTGACTGTGATCAAACACGATTATCCAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTTGCATACCATTCAGCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTTGCATACCATTCAGCCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=TCTTGCATACCATTCAGCCA&k=0&no_gap=0&offset=0&limit=50
0.130 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=TGGCTGAATGGTATGCAAGA&k=0&no_gap=0&offset=0&limit=39
0.136 | 0.006 | cgi_end;

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