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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 03:21:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Erpetoichthys calabaricus genome assembly, chromosome: 13.
LR536444.2:59325923-59325942
AAATTCTATAATAATTCACAGCTTGGATTC59325923TGAACAGAAAGGCTCACATGCCTGTAGGTCATTCCCCACATAAGGACTGA
Gobio gobio genome assembly, chromosome: 16.
OX442389.1:30945328-30945347
AGTGTGGAGTTTATAAAACACTATGAAGCC30945328TGAACAGAAAGGCTCACATGAAAAAGAATGTGTGACGAGGAAAAATTACG
Gobius niger genome assembly, chromosome: 4.
OX637598.1:16825090-16825109
TGGAATTAACACCCAGATACAGGAGGCCCA16825090TGAACAGAAAGGCTCACATGGTCTAGGAATCAAACCCAGGATGTTCTTGC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:31727729-31727748
GAATATGTATCCATTGCAGATTATTACTCT31727729TGAACAGAAAGGCTCACATGACCAAATATTTATTCCTGAAAAATATTTTT
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:96934879-96934898
GAATAGATACCCATTGCAGATCATTACTCT96934879TGAACAGAAAGGCTCACATGACCAAATATTTATTCCTGAAAAATATTTTT
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:13618794-13618813
GAATAGGTACCCATTGCAGATCATTACTCT13618794TGAACAGAAAGGCTCACATGACCAAATATTTACCTGAAAATATTTTTTAG
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:14369776-14369795
GAATAGGTACCCATTGCAGATCATTACTCT14369776TGAACAGAAAGGCTCACATGACCAATATTTACCTGAAAATATTTTTTAGA
Ostrea edulis genome assembly, chromosome: 9.
OX387712.1:38098423-38098442
TCACATGAGAGATGGACGACATACCGATCT38098423TGAACAGAAAGGCTCACATGTACCTTTGGCTCAGGTGAGCTAAAACATTT
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:122590807-122590826
AAAAATATTTTTCAGGAATAAATATTTGGT122590807CATGTGAGCCTTTCTGTTCAAGAGTAATGATCTACAATGGGTACCTATTC
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:129545358-129545377
AAAAATATTTTTCAGGAATAAATATTTGGT129545358CATGTGAGCCTTTCTGTTCAAGAGTAATGATCTACAATGGGTACCTATTC
Antiaris toxicaria isolate JCLG002 chromosome 1.
CP141166.1:72356159-72356178
AGGGAATATCTCAGAAAATAGCATAGACCT72356159CATGTGAGCCTTTCTGTTCACTGTCTGAGGCCTTGAAATCGCCAAACGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGAACAGAAAGGCTCACATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAACAGAAAGGCTCACATG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.122 | 0.113 | search_plus_done; http://172.18.8.135:50400/match?q=TGAACAGAAAGGCTCACATG&k=0&no_gap=0&offset=0&limit=50
0.144 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=CATGTGAGCCTTTCTGTTCA&k=0&no_gap=0&offset=0&limit=42
0.146 | 0.002 | cgi_end;

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