GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 08:42:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EG-E11_002_D07 embsomSSHE1, Early somatic embryos (SSH) BAP/no BAP Elaeis guineensis cDNA clone EG-E11_002_D07, mRNA sequence.
JK668629.1:22-41
CTGATCCATGACTGATAGAGG22TGACGGACCTGCAAAGAAATAGAAGTCGAGAATTCCTCCAATCACTTTGT
Elaeis guineensis EST, clone (6lib)_isotig23631.
LM613514.1:2233-2252
CTCAGTGTACTGATCCATGACTGATAGAGG2233TGACGGACCTGCAAAGAAATAGAAGTCGAGAATTCCTCCAATCACTTTGT
Netelia dilatata genome assembly, chromosome: 2.
OX328012.1:1799087-1799106
AATTTGCATCGTCAGATTTCCAAATTGACA1799087TGACGGACCTGCAAAGAAATGAATGAGTCGAAGAGCTCATTTAATGGAAT
Diabrotica balteata genome assembly, chromosome: 3.
OU898278.1:159641691-159641710
ATTACCACCTTGAAAATGCATTGTGATGAC159641691ATTTCTTTGCAGGTCCGTCAATTTTTATTGTACTTTATAGATGGCTAGAA
Agapetus fuscipes genome assembly, chromosome: 18.
OX637350.1:10550667-10550686
TGCAGCTGCTCTGTGGGATATTATGGCCTA10550667ATTTCTTTGCAGGTCCGTCACCTTCAACACACAACCCCATCCATCATTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGACGGACCTGCAAAGAAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGACGGACCTGCAAAGAAAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.286 | 0.277 | search_plus_done; http://172.18.8.135:50400/match?q=TGACGGACCTGCAAAGAAAT&k=0&no_gap=0&offset=0&limit=50
0.317 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=ATTTCTTTGCAGGTCCGTCA&k=0&no_gap=0&offset=0&limit=47
0.319 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).