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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 08:12:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-13159 Pericarp Coffea canephora cDNA clone cccp27k14 5', mRNA sequence.
DV675962.1:21-46
GAAGAAAAAGCTGAAGAATA21TGATTATTATGACTCTGACGACGGCGGCAAACGTAGAAACGACCAAGTCTCGGACA
CGN-39523 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w12i11 5', mRNA sequence.
DV694858.1:352-377
AGAAGAAGAAGAAGAAAAAGCTGAAGAATA352TGATTATTATGACTCTGACGACGGCGGCAAACGTAGAAACGACCAAGTCTCGGACA
CGN-49412 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w27n16 5', mRNA sequence.
DV702939.1:374-399
AGAAGAAGAAGAAGAAAAAGCTGAAGAATA374TGATTATTATGACTCTGACGACGGCGGCAAACGTAGAAACGACCAAGTCTCGGACA
TransId-230995 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEVO95TV similar to AT5g64160/MHJ24_14 - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT005882.1:170-195
AGAAGAAGAAGAAGAAAAAGCTGAAGAATT170TGATTATTATGACTCTGACGACGGCGGCAAACGTAGAAACGACCAAGTCTCGGACA
TransId-238060 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEY247TV similar to AT5g64160/MHJ24_14 - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT008499.1:247-272
AGAAGAAGAAGAAGAAAAAGCTGAAGAATT247TGATTATTATGACTCTGACGACGGCGGCAAACGTAGAAACGACCAAGTCTCGGACA
TransId-240947 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEYZ65TV similar to AT5g64160/MHJ24_14 - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT009637.1:118-143
AGAAGAAGAAGAAGAAAAAGCTGAAGAATA118TGATTATTATGACTCTGACGACGGCGGCAAACGTAGAAACGACCAAGTCTCGGACA
CA00-XX-LV8-084-H09-MC.F Coffea arabica LV8 Coffea arabica cDNA clone CA00-XX-LV8-084-H09-MC, mRNA sequence.
GT701336.1:219-244
AGAAGAAGAAGAAGAAAAAGCTGAAGAATT219TGATTATTATGACTCTGACGACGGCGGCAAACGTAGAAACGACCAAGTCTCGGACA
CA00-XX-LV8-089-C05-QH.F Coffea arabica LV8 Coffea arabica cDNA clone CA00-XX-LV8-089-C05-QH, mRNA sequence.
GT701337.1:72-97
AGAAGAAGAAGAAGAAAAAGCTGAAGAATT72TGATTATTATGACTCTGACGACGGCGGCAAACGTAGAAACGACCAAGTCTCGGACA
CA00-XX-FB1-065-H03-CE.F Coffea arabica FB1 Coffea arabica cDNA clone CA00-XX-FB1-065-H03-CE, mRNA sequence.
GT709833.1:345-370
AGAAGAAGAAGAAGAAAAAGCTGAAGAATT345TGATTATTATGACTCTGACGACGGCGGCAAACGTAGAAACGACCAAGTCTCGGACA
CA00-XX-CS1-063-D12-AC.F Coffea arabica CS1 Coffea arabica cDNA clone CA00-XX-CS1-063-D12-AC, mRNA sequence.
GT725113.1:344-369
AGAAGAAGAAGAAGAAAAAGCTGAAGAATT344TGATTATTATGACTCTGACGACGGCGGCAAACGTAGAAACGACCAAGTCTCGGACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGATTATTATGACTCTGACGACGGCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGATTATTATGACTCTGACGACGGCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.853 | 0.844 | search_plus_done; http://172.18.8.135:50400/match?q=TGATTATTATGACTCTGACGACGGCG&k=0&no_gap=0&offset=0&limit=50
0.876 | 0.023 | search_minus_done; http://172.18.8.135:50400/match?q=CGCCGTCGTCAGAGTCATAATAATCA&k=0&no_gap=0&offset=0&limit=40
0.876 | 0.000 | cgi_end;

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