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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-16 23:55:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cucumis melo genomic scaffold, anchoredscaffold00003.
LN681847.1:4039706-4039726
NNNNNNNNNNNNNNNNNNTACCTAGCATCC4039706TGATTGAAGGAAGCACATAGGATGGGGTACGAAGACGGTTGATTTGCCATA
Cucumis melo genomic chromosome, chr_5.
LN713259.1:23319235-23319255
NNNNNNNNNNNNNNNNNNTACCTAGCATCC23319235TGATTGAAGGAAGCACATAGGATGGGGTACGAAGACGGTTGATTTGCCATA
UNVERIFIED: Cucumis melo subsp. melo clone DOUBLON_Contig331 genomic sequence, sequence.
MW591951.1:1985933-1985953
AGAGAGAGAGGAAGAACATACCTAGCATCC1985933TGATTGAAGGAAGCACATAGGATGGGGTACGAAGACGGTTGATTTGCCATA
UNVERIFIED: Cucumis melo subsp. melo clone ANSO77_Contig_104 genomic sequence, sequence.
MW591952.1:2049838-2049858
GAGAGAGAAGGAAGAACATACCTAGCATCC2049838TGATTGAAGGAAGCACATAGGATGGGGTACGAAGACGGTTGATTTGCCATA
Cucumis melo isolate PI 511890 chromosome 5.
CP136110.1:4883726-4883746
TATGGCAAATCAACCGTCTTCGTACCCCAT4883726CCTATGTGCTTCCTTCAATCAGGATGCTAGGTATGTTCTTCCTTCTCTCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGATTGAAGGAAGCACATAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGATTGAAGGAAGCACATAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.130 | 0.121 | search_plus_done; http://172.18.8.135:50400/match?q=TGATTGAAGGAAGCACATAGG&k=0&no_gap=0&offset=0&limit=50
0.151 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=CCTATGTGCTTCCTTCAATCA&k=0&no_gap=0&offset=0&limit=46
0.151 | 0.001 | cgi_end;

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