GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-17 13:30:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Dianthus caryophyllus mRNA, clone: CES02I03, 5' end sequence.
FY383036.1:370-389
TCAAGACCTAATAAATGGGCTTCAAAATTG370TGGAGGATTTGATGAAAGCCCAACCTCATGGTACCATAATAACTTGACTC
Logfia minima genome assembly, chromosome: 1.
OY992763.1:29196359-29196378
CTATTATGGCCAATCCCGATAATCAATCCA29196359TGGAGGATTTGATGAAAGCCACTCGTAAGGGTCAAGGCTCGGCCATCACT
Logfia minima genome assembly, chromosome: 3.
OY992765.1:28375452-28375471
ATCCAGTGGCCAATCCCAATAATCAATCCA28375452TGGAGGATTTGATGAAAGCCACCCGTACGGGTCAAGGCTCGGCCATTACT
Logfia minima genome assembly, chromosome: 10.
OY992772.1:22545461-22545480
ATCCAATGGCCAATCCCGATAATCAATCCA22545461TGGAGGATTTGATGAAAGCCACCCGTACGGGTCAAGGCTCGGCCATTACT
Mythimna vitellina genome assembly, chromosome: Z.
OX438684.1:37604703-37604722
TCGGCAAACAACACCTTTGCAGGAGCACTT37604703TGGAGGATTTGATGAAAGCCACCGAAGCTGCTATTAACGTAGCCACCTAC
Lacanobia oleracea genome assembly, chromosome: 13.
OX493398.1:10613455-10613474
AGCTAAAGCTGCTCAATAACACCTGTACTT10613455TGGAGGATTTGATGAAAGCCACCGATCGATGTTGCAATTAACGTAGCCAC
Logfia minima genome assembly, chromosome: 10.
OY992772.1:22070165-22070184
AGTGATGTCCGAGCCTTGACCCTTACGGGT22070165GGCTTTCATCAAATCCTCCATGGATTGATTATCGGGATTGGCCATTAAAT
Logfia minima genome assembly, chromosome: 11.
OY992773.1:14256823-14256842
AGTGATGCCCGAGCCTTGACCCTTACGGGT14256823GGCTTTCATCAAATCCTCCATGGATTGATTATCGGGATTGGCTATTGGAA
Lacanobia wlatinum genome assembly, chromosome: 2.
OX388024.1:28404075-28404094
GTAGGTGGCTACGTCAATTGCATCGTCGTT28404075GGCTTTCATCAAATCCTCCAAAGTACATACAGGAGTATGGGCACTTGGGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGAGGATTTGATGAAAGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGAGGATTTGATGAAAGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.182 | 0.173 | search_plus_done; http://172.18.8.135:50400/match?q=TGGAGGATTTGATGAAAGCC&k=0&no_gap=0&offset=0&limit=50
0.213 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=GGCTTTCATCAAATCCTCCA&k=0&no_gap=0&offset=0&limit=44
0.215 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).