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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 05:44:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Podarcis lilfordi genome assembly, chromosome: 10.
OX395135.1:20872569-20872588
AGCACCATAGGCACAGACGGTGGGAAAAGC20872569TGGATTTTGTTGTGGAAGCAGAAGGCGAAACCTTGGCTGGCTGGATATAG
Zootoca vivipara genome assembly, chromosome: 10.
OY735911.1:20647406-20647425
AGCATCATAGGCACAGACGATGGGGAAAGC20647406TGGATTTTGTTGTGGAAGCAGAAGGCGAAACCTTGGCTGGCTGGATATAG
KS20006E12 KS20 Capsicum annuum cDNA, mRNA sequence.
GD093879.1:413-432
TAGGAGAACAAAGTGCGATTCAAAAGTAAT413TGGATTTTGTTGTGGAAGCAATTTGTTTGCTGATTGAAAAAGTGATGGAT
TSA: Capsicum annuum MGMT_Contig38895 mRNA sequence.
JW089139.1:473-492
TAGGAGAACAAAGTGCGATTCAAAAGTAAT473TGGATTTTGTTGTGGAAGCAATTTGTTTGCTGATTGAAAAAGTGATGGAT
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:161534783-161534802
TAGGAGAACAAAGTGCGATTCAAAAGTAAT161534783TGGATTTTGTTGTGGAAGCAATTTGTTTGCTGATTGAAAAAGTGATGGAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:174277247-174277266
TAGGAGAACAAAGTGCGATTCAAAAGTAAT174277247TGGATTTTGTTGTGGAAGCAATTTGTTTGCTGATTGAAAAAGTGATGGAT
Sphagnum tenellum genome assembly, chromosome: 12.
OY998153.1:4575860-4575879
CTGGGTGGCACTGCATAAATTTTGCAACTT4575860TGGATTTTGTTGTGGAAGCAAAGAGATGTTTGATGAACTGGGATTTCTTT
Myrrha octodecimguttata genome assembly, chromosome: 9.
OY294064.1:41644578-41644597
GGTGTTATCTACGTGGGAAAGTTGACAAGA41644578TGGATTTTGTTGTGGAAGCAAGTTATGGAAATTTTGGCACTTCAGGTTGC
Sciaenops ocellatus chromosome 14.
CP136879.1:8457105-8457124
ATGAGAAGACGAGCGCCTCCCTCCTGCGAC8457105TGCTTCCACAACAAAATCCACCCCACGTTTCACCAGTTGGATGCTTTTAA
Danio rerio genome assembly, chromosome: 6.
LR812043.1:38229019-38229038
CTCAAAAATAATACATTTACAAAGTTTTCA38229019TGCTTCCACAACAAAATCCAATTCGTTAGTTTAAAATACGATTCAAAAAT
Danio rerio genome assembly, chromosome: 6.
LR812068.1:37776268-37776287
CTCAAAAATAATACATTTACAAAGTTTTCA37776268TGCTTCCACAACAAAATCCAATTCGTTAGTTTAAAATACGATTCAAAAAT
Danio rerio strain Nadia (NA) genome assembly, chromosome: 6.
LR812574.1:37208941-37208960
CTCAAAAATAATACATTTACAAAGTTTTCA37208941TGCTTCCACAACAAAATCCAATTCGTTAGTTTAAAATACGATTCAAAAAT
Danio rerio genome assembly, chromosome: 6.
LR812599.1:35246408-35246427
CTCAAAAATAATACATTTACAAAGTTTTCA35246408TGCTTCCACAACAAAATCCAATTCGTTAGTTTAAAATACGATTCAAAAAT
Telmatherina bonti genome assembly, chromosome: 22.
OW121842.1:8666040-8666059
AAAAACAAATTTCAGTCCAATTTGCAGCAG8666040TGCTTCCACAACAAAATCCATTTTTGAAAGCTTCAAACAAACATCACACT
Danio rerio genome assembly, chromosome: 6.
OX063295.1:40400455-40400474
CTCAAAAATAATACATTTACAAAGTTTTCA40400455TGCTTCCACAACAAAATCCAATTCGTTAGTTTAAAATACGATTCAAAAAT
Podarcis cretensis genome assembly, chromosome: 10.
OX638158.1:53782214-53782233
CTATATCCAGCCAGCCAAGGTTTCGCCTTC53782214TGCTTCCACAACAAAATCCAGCTTTTCCCACCGTCTGTGCCTATGGTGCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGGATTTTGTTGTGGAAGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGGATTTTGTTGTGGAAGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.240 | 0.231 | search_plus_done; http://172.18.8.135:50400/match?q=TGGATTTTGTTGTGGAAGCA&k=0&no_gap=0&offset=0&limit=50
0.286 | 0.046 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTTCCACAACAAAATCCA&k=0&no_gap=0&offset=0&limit=42
0.291 | 0.005 | cgi_end;

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