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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-07 17:54:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

GR__Eb0040K20.f GR__Eb Gossypium raimondii cDNA clone GR__Eb0040K20 5', mRNA sequence.
CO108704.1:742-761
GAATATGGTTCTTACGGTGCTTGCCTATTA742TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCTCTCCA
GR__Eb10M08.r GR__Eb Gossypium raimondii cDNA clone GR__Eb10M08 3', mRNA sequence.
CO126636.1:199-218
GAAAAGAGCAGTATTCCAGAGAGTCTATTA199TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCCCTCCA
CBTI8578.g1_D09.ab1:P Triphysaria pusilla root tip normalized cDNA library Triphysaria pusilla cDNA, mRNA sequence.
EY182339.1:804-823
GTATATGATTCTTCCTGTGCTTTCCGATTA804TGTTGCCATGATTTCCAATTATAACAGCGGTATTCCACAAACATCCCC
Fagus sylvatica EST, clone WZ0AFSCA14YL23NM1.
FR597470.1:742-761
TTTAGTTTACCTTCCGATGCTTGCCAATTA742TGTTGCCATGATTTCCAATTATAAC
K-D6-G01 Castanea sativa bud dormancy Castanea sativa cDNA similar to beta-ureidopropionase, mRNA sequence.
HO847173.1:491-510
GTATATGATTCTTCCGATGCTTGCCAATTA491TGTTGCCATGATTTCCAATTATAACAGCAGTGTTCCAAATAGTCTCTCCA
H10_422722.94.S1104094013.anther-SP7774 Normalized cDNA library of anther of upland cotton cultivar CCRI36 Gossypium hirsutum cDNA 3', mRNA sequence.
JK704205.1:746-765
GAATATGGTTCTTACGGTGCTTGCCTATTA746TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCTCTCCA
TSA: Betula platyphylla Unigene40272_ya_RNA mRNA sequence.
JP708059.1:759-778
GTATATGGTTTTTCCGATGCTTGCCAATTA759TGTTGCCATGATTTCCAATTATAACAGCAGTGTTCCAAAGAGTCTCTCCA
TSA: Betula platyphylla Unigene6162_All.Beplwood mRNA sequence.
KA246083.1:852-871
GTATATGGTTTTTCCGATGCTTGCCAATTA852TGTTGCCATGATTTCCAATTATAACAGCAGTGTTCCAAAGAGTCTCTCCA
Gossypium hirsutum chromosome UNKNOWN clone ZMMBBb-621G9, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces.
AC202820.1:80420-80439
CTGCATTTATCTTACGGTGCTTGCCAATTA80420TGTTGCCATGATTTCCAATTATAACAGAAATAGAGTTCTGAAAAAGACCG
Gossypium hirsutum cultivar TM1 chromosome D12.
CP023742.1:942110-942129
CGGCATTTACCTTACGGTGCTTGCCTATTA942110TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCTCTCCA
Gossypium hirsutum cultivar TM1 chromosome D11.
CP023744.1:46503083-46503102
CTGCATTTACCTTACGGTGTTTGCCTATTA46503083TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCTCTCCA
Gossypium raimondii isolate D5-4 chromosome D5_05.
CP032557.1:32341724-32341743
GAAAAGAGCAGTATTCCAGAGAGTCTATTA32341724TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCCCTCCA
Gossypium raimondii isolate D5-4 chromosome D5_05.
CP032557.1:43407219-43407238
GAAAAGAGCAGTATTCCAGAGAGTCTATTA43407219TGTTGCCATGATTTCCAATTATAACAGCGGTATTCCAGAGAGTCTCTCCA
Gossypium raimondii isolate D5-4 chromosome D5_05.
CP032557.1:44888741-44888760
GAAAAGAGCAGTATTCCAGAGAGTCTATTA44888741TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCCCTCCA
Gossypium raimondii isolate D5-4 chromosome D5_07.
CP032559.1:12945952-12945971
CTGCATTTACCATACGGTGCTTGCCTATTA12945952TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCTCTCCA
Gossypium raimondii isolate D5-4 chromosome D5_07.
CP032559.1:27735706-27735725
CTACATTTACCTTACGGTGCTTGCCTATTA27735706TGTTGCCATGATTTCCAATTATAACAAAAATAGAGTTTTGAAGAAGACCG
Gossypium raimondii isolate D5-4 chromosome D5_09.
CP032561.1:15436182-15436201
GAAAAGAGTAGTATTCCAGAGAGTCTATTA15436182TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCTCTCCA
Gossypium raimondii isolate D5-4 chromosome D5_11.
CP032563.1:11304430-11304449
CTGCATTTACCTTACGGTGCTTGCCTATTA11304430TGTTGCCATGATTTCCAATTATAACGCAGTATTCCAGAGAGTCTCTCCAT
Gossypium raimondii isolate D5-4 chromosome D5_12.
CP032564.1:55426219-55426238
CTGCATTTACCTTACGGTGCTTGCCTATTA55426219TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCTCTCCA
Gossypium turneri isolate D10-2 chromosome D10_01.
CP032571.1:57599962-57599981
CTGCGTTTACCTTACGGTGCTTGCCTATTA57599962TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCTCTCCA
Gossypium turneri isolate D10-2 chromosome D10_02.
CP032572.1:14643250-14643269
CTGCATTTACCTTATGGTGCTTGCCTGTTA14643250TGTTGCCATGATTTCCAATTATAACAACAGTATTCCAGAGAGTCTCTCCA
Gossypium turneri isolate D10-2 chromosome D10_02.
CP032572.1:46372953-46372972
CTGCATTTACCTTACGGTGCTTGCCTATTA46372953TGTTGCCATGATTTCCAATTATCACAGCAGTATTCTAGAGAGTCTCTCCA
Gossypium turneri isolate D10-2 chromosome D10_12.
CP032582.1:41675393-41675412
CTGCATTTACCTTATGGTGCTTGCCTATTA41675393TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCTCTCCA
Gossypium herbaceum isolate Zhongcao1 chromosome 12.
CP106691.1:105462215-105462234
CTGCATTTACCTTACGGTGCTTGCCTATTA105462215TGTTGCCATGATTTCCAATTATAACAGCAGTATTCCAGAGAGTCTCTCCA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 1.
CP124719.1:117527649-117527668
CGGGATTTACCTTCCGATGTTTCCCTATTA117527649TGTTGCCATGATTTCCAATTATTACTGCTGTGTTCCACAGCGTTTCTCCA
Corylus americana cultivar Rush chromosome 4.
CP125817.1:7528043-7528062
TTTAGCTTACTTTCAGATGCTTGCCAATTA7528043TGTTGCCATGATTTCCAATTATAACAGCAGTGTTCTCCATGATTGACATC
Corylus americana cultivar Rush chromosome 4.
CP125817.1:7579099-7579118
TTTAGCTTACTTTCCGATGCTTGCCAATTA7579099TGTTGCCATGATTTCCAATTATAACAGCAGTGTTCCAAAGAGTCTCTCCA
Corylus americana cultivar Winkler chromosome 4.
CP125828.1:7251283-7251302
TTTAGCTTACTTTCCGATGCTTGCCAATTA7251283TGTTGCCATGATTTCCAATTATAACAGCAGTGTTCTCCATGATTGACATC
Ziziphus jujuba cultivar Dongzao chromosome 9.
CP134459.1:26416457-26416476
ATCTATTTACCTTCCGATGCTTGCCGATTA26416457TGTTGCCATGATTTCCAATTATGACAGCAGTGTTCCAGAGGGTCTCTCCA
Theobroma cacao isolate Sca6 chromosome 2.
CP139292.1:7405490-7405509
CTACATTTACCTTACGATGTTTGCCTATTA7405490TGTTGCCATGATTTCCAATTATAATAGCAGTATTCCAGAGAGTCTCCCCA
Corylus avellana genome assembly, chromosome: ca4.
LR899426.1:7713332-7713351
TTTAGCTTACTTTCAGATGCTTGCCAATTA7713332TGTTGCCATGATTTCCAATTATAACAGCAGTGTTCTCCATGATTGACATC
Corylus avellana genome assembly, chromosome: ca4.
LR899426.1:7739754-7739773
TTTAGCTTACTTTCCGATGCTTGCCAATTA7739754TGTTGCCATGATTTCCAATTATAACAGCAGTGTTCCAAAGAGTCTCTCCA
Corylus avellana genome assembly, chromosome: ca4.
LR899426.1:7789523-7789542
TTTAGCTTACTTTCCGATGCTTGCCAATTA7789523TGTTGCCATGATTTCCAATTATAACAGCAGTGTTCCAAAGAGTCTCTCCA
Theobroma cacao genome assembly, chromosome: II.
LT594789.1:6563121-6563140
CTACATTTACCTTACGATGTTTGCCTATTA6563121TGTTGCCATGATTTCCAATTATAATAGCAGTATTCCAGAGAGTCTCCCCA
Potentilla anserina genome assembly, chromosome: 7.
OW176987.1:6250471-6250490
ATTTATTTACCTTTCGATGCTTGCCAATTA6250471TGTTGCCATGATTTCCAATTATTACTGCAGTGTTCCAGAGAGTCTCTCCA
Scutellaria galericulata genome assembly, chromosome: 1.
OX335784.1:33174519-33174538
CTTGCATTACCTTCCTGTGCTTTCCAATTA33174519TGTTGCCATGATTTCCAATTATTACGGCGGTATTCCAGAGAACTTCCCCA
Scutellaria minor genome assembly, chromosome: 2.
OX940726.1:35394193-35394212
CTTGCATTACCTTCCTGTGCTTTCCAATTA35394193TGTTGCCATGATTTCCAATTATTACGGCAGTATTCCAGAGAACTTCCCCA
Theobroma cacao genome assembly, chromosome: 2.
OY284449.1:6926633-6926652
CTACATTTACCTTACGATGTTTGCCTATTA6926633TGTTGCCATGATTTCCAATTATAATAGCAGTATTCCAGAGAGTCTCCCCA
Rosa rugosa genome assembly, chromosome: 3.
OY288193.1:23391719-23391738
ATTTATTTACCTTTCGATGCTTGCCAATTA23391719TGTTGCCATGATTTCCAATTATGACAGCAGTGTTCCACAGAGTCTCCCCA
Verbena officinalis genome assembly, chromosome: 4.
OY292388.1:1984391-1984410
GTAGCATTACCTTTCTGTGTGTTCCAATTA1984391TGTTGCCATGATTTCCAATTATTACAGCAGTATTCCACAAAGTTTCCCCA
Quercus cerris genome assembly, chromosome: 6.
OY770011.1:17078850-17078869
TCTTGTCTACCTTCCGATGCTTGCCAATTA17078850TGTTGCCATGATTTCCAATTATAACAGCAGTGTTCCAAATAGTCTCTCCA
Potentilla sterilis genome assembly, chromosome: 10.
OY821763.1:27259704-27259723
ATCTATTTACCTTTCGGTGCTTGCCAATTA27259704TGTTGCCATGATTTCCAATTATGACAGCAGTGTTCCAGAGAGTTTCCCCA
Potentilla sterilis genome assembly, chromosome: 13.
OY821766.1:23346811-23346830
ATCTATTTACCTTTCGGTGCTTGCCTATTA23346811TGTTGCCATGATTTCCAATTATGACAGCAGTGTTCCAGAGAGTTTCCCCA
Xylota segnis genome assembly, chromosome: 3.
OY757238.1:44197330-44197349
CTATTTCATACAACATTTACGGAAGCACCC44197330TGTTGCCATGATTTCCAATTTTTTTGAAACAGAAACGACAACCCTTCACA
Poecilus cupreus genome assembly, chromosome: X.
OZ012715.1:29787584-29787603
GCCTCGCGTGTATAATCTAGGTTCAAAATT29787584TGTTGCCATGATTTCCAATTTATTCAAATTAAAACAAAAAGAAATGTTGG
Sequence 2949 from patent US 9890389.
MI431601.1:632-651
TGGAGAGACTCTTTGGAACACTGCTGTTAT632AATTGGAAATCATGGCAACATAATTGGCAAGCATCGGAAAAACCATATAC
Sequence 2951 from patent US 9890389.
MI431603.1:754-773
TGGGGAGACTCTCTGGAATACTGCTATTAT754AATTGGAAATCATGGCAACATAATAGGCAAACATCGTAAGAACCATATTC
Sequence 2952 from patent US 9890389.
MI431604.1:746-765
TGGAGAGACTCTCTGGAATACTGCTGTTAT746AATTGGAAATCATGGCAACATAATAGGCAAGCACCGTAAGAACCATATTC
Sequence 2955 from patent US 9890389.
MI431607.1:712-731
TGGAGAGACTCTCTGGAATACTGCTGTTAT712AATTGGAAATCATGGCAACATAATAGGCAAGCACCGTAAGAACCATATTC
Sequence 2949 from patent US 10597672.
MO986523.1:632-651
TGGAGAGACTCTTTGGAACACTGCTGTTAT632AATTGGAAATCATGGCAACATAATTGGCAAGCATCGGAAAAACCATATAC
BNLGHi6341 Six-day Cotton fiber Gossypium hirsutum cDNA 5' similar to (U23139) highly similar to beta-ureidopropionase (SP:BUP_RAT) [Caenorhabditis elegans], mRNA sequence.
AI730169.1:39-58
TGGAGAGACTCTCTGGAATACTGCTGTTAT39AATTGGAAATCATGGCAACATAATAGGCAAGCACCGTAAGAACCATATTC
GA__Ed0015D02f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0015D02f, mRNA sequence.
BQ409076.1:313-332
TGGAGAGACTCTCTGGAATTCGTCTGTTAT313AATTGGAAATCATGGCAACATAATAGGCAAGCACCGTAAGAACCATATTC
GR__Ea47L24.r GR__Ea Gossypium raimondii cDNA clone GR__Ea47L24 3', mRNA sequence.
CO082915.1:350-369
CATGGAGAGACTCTGGAATACTGCTGTTAT350AATTGGAAATCATGGCAACATAATAGGCAAGCACCGTAAGAACCATATTC
GR__Ea09K12.f GR__Ea Gossypium raimondii cDNA clone GR__Ea09K12 5', mRNA sequence.
CO089937.1:543-562
TGGAGAGACTCTCTGGAATACTGCTGTTAT543AATTGGAAATCATGGCAACATAATAGGCAAGCACCGTAAGAACCATATTC
GR__Ea09P17.f GR__Ea Gossypium raimondii cDNA clone GR__Ea09P17 5', mRNA sequence.
CO090154.1:68-87
TGGAGAGACTCTCTGGAATACTGCTGTTAT68AATTGGAAATCATGGCAACATAATAGGCAAGCACCGTAAGAACCATATTC
TSA: Picrorhiza kurrooa 32579_C839215_159.0_0 mRNA sequence.
JR815244.1:631-650
TGGTGAAGTTCTTTGGAACACTGCTGTAAT631AATTGGAAATCATGGCAACATAATTGGAATGCACAGAAAGAACCATATAC
TSA: Nothofagus nervosa isotig01992 mRNA sequence.
JT783551.1:458-477
TGGAGAGACTATTTGGAACACTGCTGTTGT458AATTGGAAATCATGGCAACATAATTGGCAAGCATCGGAAGAACCATATAC
Gossypium hirsutum cultivar TM1 chromosome A12.
CP023745.1:606639-606658
TGGAGAGACTCTCTGGAATACTGCTGTTAT606639AATTGGAAATCATGGCAACATAATAGGCAAGCACCGTAAGGTAAATGCAG
Gossypioides kirkii chromosome KI_12.
CP032254.1:11996707-11996726
TGGAGAGACTCTCTGGAATACTGCTGTTAT11996707AATTGGAAATCATGGCAACATAATAGGCAAGCACCGTAAGGTAAATGCAG
Gossypium raimondii isolate D5-4 chromosome D5_01.
CP032553.1:3097720-3097739
CATGGAGAGACTCTGGAATACTGCTGTTAT3097720AATTGGAAATCATGGCAACATAATAGGCAAGCACCGTAAGGTAAACGCAG
Gossypium raimondii isolate D5-4 chromosome D5_05.
CP032557.1:56199685-56199704
TGGAGGGACTCTCTGGAATACTGCTGTTAT56199685AATTGGAAATCATGGCAACATAATAGACTCTCTGGAATACTGCTCTTTTC
Gossypium raimondii isolate D5-4 chromosome D5_10.
CP032562.1:21829624-21829643
TGGAGAGACTCTCTGGAATATTGTTGTTAT21829624AATTGGAAATCATGGCAACATAATAGGCAAGCACCGTAAGGTAAATGCAG
Fagus sylvatica genome assembly, chromosome: 7.
OU015767.1:8047952-8047971
TGGAGAAACTATTTGGAACACTGCTGTTAT8047952AATTGGAAATCATGGCAACATAATTGGCAAGCATCGGAAGGTAAACTAAA
Fraxinus pennsylvanica genome assembly, chromosome: 7.
OU503042.1:28195280-28195299
TGGGGAGACTATCTGGAATACTGCTGTAAT28195280AATTGGAAATCATGGCAACATAATAGGGAAGCACAGGAAGGTGATGTTGA
Quercus robur genome assembly, chromosome: 11.
OW028775.1:25727095-25727114
TGGAGAGACTATTTGGAACACTGCTGTTAT25727095AATTGGAAATCATGGCAACATAGTTGGCAAGCATCGGAAGGTAGACAAGA
Ballota nigra genome assembly, chromosome: 2.
OX344721.1:59146319-59146338
CGGGGAAACTATCTGGAACACTGCTGTAAT59146319AATTGGAAATCATGGCAACATTATTGGAAAACACAGGAAGGTAACACAAG
Ajuga chamaepitys genome assembly, chromosome: 2.
OY282496.1:70679088-70679107
CGGGGAGACTATCTGGAATACGGCTGTTAT70679088AATTGGAAATCATGGCAACATAATCGGAAAGCATAGGAAGGTAATATATA
Theobroma cacao genome assembly, chromosome: 2.
OY284439.1:36959914-36959933
TGGGGAGACTCTCTGGAATACTGCTATTAT36959914AATTGGAAATCATGGCAACATAATAGGCAAACATCGTAAGGTAAATGTAG
Theobroma cacao genome assembly, chromosome: 2.
OY284459.1:36824378-36824397
TGGGGAGACTCTCTGGAATACTGCTATTAT36824378AATTGGAAATCATGGCAACATAATAGGCAAACATCGTAAGGTAAATGTAG
Alnus glutinosa genome assembly, chromosome: 11.
OY340908.1:19125600-19125619
TGGAGAGACTCTTTGGAACACTGCTGTTAT19125600AATTGGAAATCATGGCAACATAATTGGCAAGCATCGGAAAGTAAACTAAA
Quercus cerris genome assembly, chromosome: 8.
OY770013.1:25258128-25258147
TGGAGAGACTATTTGGAACACTGCTGTTAT25258128AATTGGAAATCATGGCAACATAATTGGCAAGCATCGGAAGGTAGACAAGA
Potentilla sterilis genome assembly, chromosome: 2.
OY821755.1:51671784-51671803
TGGGGAAACTCTCTGGAACACTGCTGTCAT51671784AATTGGAAATCATGGCAACATAATAGGCAAGCACCGAAAGGTAAATAGAT
Tridacna crocea genome assembly, chromosome: 2.
OX031057.1:60906642-60906661
ATAGTCCCCATTTTCCATGACACAGTGTCA60906642AATTGGAAATCATGGCAACAAAATTGGCACAATATCCTAAAGAGTTAATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGTTGCCATGATTTCCAATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGTTGCCATGATTTCCAATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.465 | 0.456 | search_plus_done; http://172.18.8.135:50400/match?q=TGTTGCCATGATTTCCAATT&k=0&no_gap=0&offset=0&limit=50
0.899 | 0.434 | search_minus_done; http://172.18.8.135:50400/match?q=AATTGGAAATCATGGCAACA&k=0&no_gap=0&offset=0&limit=5
0.917 | 0.018 | cgi_end;

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