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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-08 04:39:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

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Arabidopsis thaliana cDNA clone:APD05d09_f, 3' end.
AV439554.1:185-204
AACAGAGCATATAAGGGGGATTCAACTGAA185TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RZ120a06F, 3' end.
AV538709.1:166-185
AACAGAGTATATAAGGGGGATTCAACTGAA166TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RZ136e06F, 3' end.
AV539632.1:89-108
AACAGCGTATATAAGGGGGATTCAACTGAA89TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGCTTAACTC
Arabidopsis thaliana cDNA clone:SQ042b08F, 3' end.
AV556403.1:163-182
AACAGAGTATATAAGGGGGATTCAACTGAA163TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:SQ058e11F, 3' end.
AV557019.1:159-178
AACAGAGTATATAAGGGGGATTCAACTGAA159TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:SQ095f06F, 3' end.
AV558349.1:156-175
AACAGAGTATATAAGGGGGATTCAACTGAA156TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:SQ186e10F, 3' end.
AV563392.1:168-187
AACAGAGTATATAAGGGGGATTCAACTGAA168TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL04-15-O22, 3'-end.
AV782286.1:169-188
AACAGAGTATATAAGGGGGATTCAACTGAA169TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL09-20-G03, 3'-end.
AV799524.1:165-184
AAACAGAGTATATAGGGGGATTCAACTGAA165TTAAGCTTCCCAACCACGCAACCTGGGTGGCTCGAGCGACTCGGTTAACT
Arabidopsis thaliana cDNA clone:RAFL09-57-L23, 3'-end.
AV809026.1:168-187
AACAGAGTATATAAGGGGGATTCAACTGAA168TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL11-01-F05, 3'-end.
AV818912.1:146-165
AACAGAGTATATAAGGGGGATTCAACTGAA146TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL11-07-J22, 3'-end.
AV819862.1:167-186
AACAGAGTATATAAGGGGGATTCAACTGAA167TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL11-11-I17, 3'-end.
AV820647.1:146-165
AACAGAGTATATAAGGGGGATTCAACTGAA146TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL14-07-H01, 3' end.
BP564374.1:164-183
AACAGAGTATATAAGGGGGATTCAACTGAA164TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL14-72-O21, 3' end.
BP570537.1:164-183
AACAGAGTATATAAGGGGGATTCAACTGAA164TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL14-17-N12, 3' end.
BP578369.1:164-183
AACAGAGTATATAAGGGGGATTCAACTGAA164TTAAGCTTCCCAACCACGCAACTGGGTGGCCTCGAGCGACTCGGTTACTC
Arabidopsis thaliana cDNA clone:RAFL14-27-J20, 3' end.
BP580482.1:164-183
AACAGAGTATATAAGGGGGATTCAACTGAA164TTAAGCTTCCCAACCACGCAACTGGGTGGCCTCGAGCGACTCGGTTAACT
Arabidopsis thaliana cDNA clone:RAFL16-60-P03, 3' end.
BP604003.1:168-187
AACAGAGTATATAAGGGGGATTCAACTGAA168TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL16-62-M17, 3' end.
BP604497.1:146-165
AACAGAGTATATAAGGGGGATTCAACTGAA146TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL16-75-H14, 3' end.
BP607591.1:168-187
AACAGAGTATATAAGGGGGATTCAACTGAA168TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL16-08-O09, 3' end.
BP609834.1:168-187
AAAAGAGTATATAAGGGGGATTAAACTGAA168TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTCAACTC
Arabidopsis thaliana cDNA clone:RAFL16-89-I22, 3' end.
BP612447.1:168-187
AACAGAGTATATAAGGGGGATTCAACTGAA168TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL16-17-G11, 3' end.
BP615825.1:167-186
AACAGAGTATATAAGGGGGATTCAACTGAA167TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL16-35-D09, 3' end.
BP619948.1:167-186
AACAGAGTATATAAGGGGGATTCAACTGAA167TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL17-11-J17, 3' end.
BP628205.1:154-173
AAAAGATTATATAAGGGGGATTCAACTGAA154TTAAGCTTCCCAACCACGCAACTGGGTGGTTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL19-79-B04, 3' end.
BP648431.1:167-186
AACAGAGTATATAAGGGGGATTCAACTGAA167TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL21-09-J15, 3' end.
BP661912.1:167-186
AACAGAGTATATAAGGGGGATTCAACTGAA167TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL21-11-A04, 3' end.
BP662303.1:148-167
AACAGAGTATATAAGGGGGATTCAACTGAA148TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL21-43-D20, 3' end.
BP672183.1:168-187
AACAGAGTATATAAGGGGGATTCAACTGAA168TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAAATC
Arabidopsis thaliana cDNA clone:RAFL07-26-F13, 3' end.
BP778165.1:147-166
AACAGAGTATATAAGGGGGATTCAACTGAA147TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL07-76-E17, 3' end.
BP781082.1:172-191
AACAGAGTATATAAGGGGGATTCAACTGAA172TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL07-83-H14, 3' end.
BP782771.1:147-166
AACAGAGTATATAAGGGGGATTCAACTGAA147TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Arabidopsis thaliana cDNA clone:RAFL07-57-O06, 3' end.
BP793838.1:169-188
AAAAGAGTATATAAGGGGGATTCAACTGAA169TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
63JKCOT5_T3_031_A09_25JAN2005_079 63JKCOT5 Brassica napus cDNA 5', mRNA sequence.
DY022540.1:179-198
ACAGAGTATATATGGGGAAATCCCATAGAA179TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTGACTC
AYAJU71TRB pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG420699.1:120-139
AACAGAGTATATAAGGGGGATTCAACTGAA120TTAAGCTTCCCAACCACGCAACTGGGGGGCTCGAGCGACTCGGTTAACTC
AYAUJ33TF pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG507623.1:193-212
AACAGAGTATATAAGGGGGATTCAACTGAA193TTAAGCTTCCCAACCACGCAACTGGGGGGCTCGAGCGACTCGGTTAACTC
AYBIA34TF pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence.
EG519709.1:201-220
AACAGAGTATATAAGGGGGATTCAACTGAA201TTAAGCTTCCCAACCACGCAACTGGGGGGCTCGAGTGACTCGGTTAACTC
69JKME5D_T3_006_C05_27MAR2005_043 69JKME5D Brassica napus cDNA 5', mRNA sequence.
ES266676.1:157-176
ACAGAGTATATATGGGGAAATCCCATAGAA157TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTGACTC
RR1AT54JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
EV531363.1:148-167
CAGAGTATATAAGGGGAAAGTCCAAAAGAC148TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACACGGTTAACTC
BR010216 callus cDNA library KBCG Brassica rapa subsp. pekinensis cDNA clone KBCG-022E09 5', mRNA sequence.
EX025572.1:193-212
ACAGAGTATATATGGGGAAATCCCATAGAA193TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
BR011086 callus cDNA library KBCG Brassica rapa subsp. pekinensis cDNA clone KBCG-034C06 5', mRNA sequence.
EX026442.1:207-226
ACAGAGTATATATGGGGAAATCCCATAGAA207TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
BR050194 pollen cDNA library KBPL Brassica rapa subsp. pekinensis cDNA clone KBPL-18F07 5', mRNA sequence.
EX065550.1:107-126
ACAGAGTATATATGGGGAAATCCCATAGAA107TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
BR051059 pollen cDNA library KBPL Brassica rapa subsp. pekinensis cDNA clone KBPL-31B07 5', mRNA sequence.
EX066415.1:114-133
ACAGAGTATATATGGGGAAATCCCATAGAA114TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
BR052615 pollen cDNA library KBPL Brassica rapa subsp. pekinensis cDNA clone KBPL-55C10 5', mRNA sequence.
EX067971.1:152-171
ACAGAGTATATATGGGGAAATCCCATAGAA152TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
BR052724 pollen cDNA library KBPL Brassica rapa subsp. pekinensis cDNA clone KBPL-60C03 5', mRNA sequence.
EX068080.1:35-54
ACAGAGTATATATGGGGAAATCCCATAGAA35TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
RR1C749JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
EX752103.1:165-184
CAGAGTATATAAAGGGAAAGTCCAAAAGAC165TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACACGGTTAACTC
RR4D041JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence.
EY917316.1:163-182
CAGAGTATATAAGGGGAAAGTCCAAAAGAC163TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACACGGTTAACTC
Raphanus sativus mRNA, clone: RSCF12N10, 5' end sequence.
FY431078.1:147-166
ACAGAGTATATATGGGTGTATCCCATAGAA147TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACACGGTTAACTC
Raphanus sativus mRNA, clone: RSCR06I24, 5' end sequence.
FY441667.1:151-170
ACAGAGTATATATGGGTGTATCCCATAGAA151TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACACGGTTAACTC
BNAPO3GH_T3_013_F06_13JULY2007_038 BNAPO3GH Brassica napus cDNA 5', mRNA sequence.
GR456917.1:131-150
ACAGAGTATATATGGGGAAATCCCATAGAA131TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTGACTC
TSA: Raphanus sativus var. sativus RNA, contig: WG3_13602.
FX660613.1:37-56
CAGAGTATATAAGGGGAAAGTCCAAAAGAC37TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACACGGTTAACTC
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_11399.
FX721541.1:71-90
ACAGAGTATATATGGGGAAATCCCATAGAA71TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
TSA: Pachycladon fastigiatum 89605_333_41523_7_41.Pafaleaf mRNA sequence.
JR031143.1:83-102
AAACAGAGTATTAAGGGAGATTCAGCTGAA83TTAAGCTTCCCAACCACGCAACTGGGTGGCTCTAGCGACTCGGTTAACTC
TSA: Chorispora bungeana CK_05162 mRNA sequence.
JW993228.1:162-181
AAAACAGAGCATAAGGGGGATTCAATTGAA162TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
TSA: Chorispora bungeana T_20016 mRNA sequence.
KA056846.1:268-287
AAAACAGAGCATAAGGGGGATTCAATTGAA268TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
BOGWP22TF BOGW Brassica oleracea genomic clone BOGWP22, genomic survey sequence.
BH488788.1:166-185
ACAGAGTATATATGGGGAAATCCCATAGAA166TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Capsella rubella clone CAP08-D18, complete sequence.
AC254592.1:50773-50792
AACAGAGTATAAATGGGGGATTCAGCTAAA50773TTAAGCTTCCCAACCACGCAACTGGGTGGCTCTAGCGACTCGGTTAACTC
Brassica napus cultivar Xiang5A chromosome 5.
CP123880.1:1881871-1881890
ACAGAGTATATATGGGGAAATCCCATAGAA1881871TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:2916142-2916161
TCAGAGTATATATGGGGAAATCCCATAGAA2916142TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:13617036-13617055
ACAGAGTATAGATGGGGAAATCCCATAGAA13617036TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACTCGGTTAACTC
Capsella bursa-pastoris isolate WGS_leaf chromosome 14.
CP144196.1:1407024-1407043
ACAGAGTATAAATGGGGGGATTCAGCTAAA1407024TTAAGCTTCCCAACCACGCAATTGGGTGGCTCTAGCGACCCGGTTAACTC
Raphanus sativus genome assembly, chromosome: 8.
LR778317.1:27580984-27581003
ACAGAGTATATATGGGTGTATCCCATAGAA27580984TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACACGGTTAACTC
Thlaspi arvense genome assembly, chromosome: 6.
OU466862.2:67518803-67518822
GAGTATATTATGGTGGGGAATTCGATTGAA67518803TTAAGCTTCCCAACCACGCAACTGGGTGGCTCGAGCGACGCGGTTGACTC
Draba incana genome assembly, chromosome: 2.
OY755203.1:47773978-47773997
AACAGAGTATATAAGGGAGATTCGATTGAA47773978TTAAGCTTCCCAACCACGCAACTGTGTGGCTCGAGCGACTCGGTTAACTC
Erodium maritimum genome assembly, chromosome: 1.
OY997588.1:59654207-59654226
GAAAGTTGGTTGAAGAGTTCCCGTGCCTCT59654207TTAAGCTTCCCAACCACGCAAAACCCATTTAACATCACGTTATATGTCAC
Erodium maritimum genome assembly, chromosome: 1.
OY997588.1:59664061-59664080
GAAAGTTGGTTGAAGAGTTCCCGTGCCTCT59664061TTAAGCTTCCCAACCACGCAAAACCCATTTAACATCACGTTATATGTCAC
Erodium maritimum genome assembly, chromosome: 1.
OY997588.1:59682383-59682402
GAAAGTTGGTTGAAGAGTTCCCGTGCCTCT59682383TTAAGCTTCCCAACCACGCAAAACCCATTTAACATCACGTTATATGTCAC
Erodium maritimum genome assembly, chromosome: 1.
OY997588.1:59692240-59692259
GAAAGTTGGTTGAAGAGTTCCCGTGCCTCT59692240TTAAGCTTCCCAACCACGCAAAACCCATTTAACATCACGTTATATGTCAC
Xylota segnis genome assembly, chromosome: 2.
OY757237.1:23448523-23448542
ATCCATCTTCACGGAGAGGTCAAAGACGGA23448523TTAAGCTTCCCAACCACGCAACTTTATTTCAATTTATATGAAAAAATATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTAAGCTTCCCAACCACGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTAAGCTTCCCAACCACGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.614 | 1.605 | search_plus_done; http://172.18.8.135:50400/match?q=TTAAGCTTCCCAACCACGCA&k=0&no_gap=0&offset=0&limit=50
1.675 | 0.061 | search_minus_done; http://172.18.8.135:50400/match?q=TGCGTGGTTGGGAAGCTTAA&k=0&no_gap=0&offset=0&limit=0
1.675 | 0.000 | cgi_end;

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