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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 03:06:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

63JKCOT5_T3_020_B02_22JAN2005_014 63JKCOT5 Brassica napus cDNA 5', mRNA sequence.
DY021570.1:242-261
GTCATTACGACACGTGTAGTGGTATTATAT242TTACCCACCTTGGCTTCATCTTCCTTTCCGCCTATCTTCCTGGTCTTTTC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB032C14, complete sequence.
AC189306.2:104504-104523
GTCATTACGACACGTGTAGTGGTATTATAT104504TTACCCACCTTGGCTTCATCTTCCTTTCCGCCTATCTTCCTGGTCTTTTC
Brassica napus microsatellite Y5F115-1 sequence.
JX131202.1:1-20
1TTACCCACCTTGGCTTCATCTTCCTTTTCGCCTATCTTCCTGGTCTTTTC
KBrB032C14F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB032C14, genomic survey sequence.
DX034359.1:429-448
GAAAAGACCAGGAAGATAGGCGGAAAGGAA429GATGAAGCCAAGGTGGGTAAATATAATACCACTACACGTGTCGTAATGAC
KBrB130H03R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB130H03, genomic survey sequence.
ED537270.1:422-441
GAAAAGACCAGGAAGATAGGCGGAAAGGAA422GATGAAGCCAAGGTGGGTAAATATAATACCACTACACGTGTCGTAATGAC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH095B11, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.
AC241164.1:63368-63387
GAAAAGACCAGGAAGATAGGCGGAAAGGAA63368GATGAAGCCAAGGTGGGTAAATATAATACCACTACACGTGTCGTAATGAC
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:9981746-9981765
GAAAAGACCAGGAAGATAGGCGGAAAGGAA9981746GATGAAGCCAAGGTGGGTAAATATAATACCACTACACGTGTCGTAATGAC
Brassica rapa genome, scaffold: A03.
LR031572.1:9815699-9815718
GAAAAGACCAGGAAGATAGGCGGAAAGGAA9815699GATGAAGCCAAGGTGGGTAAATATAATACCACTACACGTGTCGTAATGAC
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:9938327-9938346
GAAAAGACCAGGAAGATAGGCGGAAAGGAA9938327GATGAAGCCAAGGTGGGTAAATATAATACCACTACACGTGTCGTAATGAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTACCCACCTTGGCTTCATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTACCCACCTTGGCTTCATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.165 | 0.157 | search_plus_done; http://172.18.8.135:50400/match?q=TTACCCACCTTGGCTTCATC&k=0&no_gap=0&offset=0&limit=50
0.241 | 0.075 | search_minus_done; http://172.18.8.135:50400/match?q=GATGAAGCCAAGGTGGGTAA&k=0&no_gap=0&offset=0&limit=47
0.245 | 0.004 | cgi_end;

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