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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 07:54:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Denticeps clupeoides genome assembly, chromosome: 1.
LR535813.1:1420728-1420747
TGTACTGCAGTGTTTCACAATGACAATCAC1420728TTCACTTTCACTCTCAGCCAGACAAGATGGACAGATCATCACTATCTTCA
Arctium minus genome assembly, chromosome: 12.
OX941091.1:40727413-40727432
AGCCATATCGATCTCCTCCTCTGATCTTTC40727413TTCACTTTCACTCTCAGCCACCAATACTTTCTTCTTCTTATTCTTCTTCT
1_Tdi_b3v08.
OA620825.1:470-489
AAAAATAAAATCATTTTCTCTCGCTTTCTG470TTCACTTTCACTCTCAGCCAAATAATAATCATAACATTCCAAACTGTTAT
4_Tbi_b3v08.
OD564399.1:175429-175448
CAAACGATTTAATGCATTCTGCAAGTCACT175429TTCACTTTCACTCTCAGCCATTAATATGGCATCATCTGCATATAGCAGCA
4_Tte_b3v08.
OE009604.1:15102-15121
CCACATTCAAACACTTAATACATTCTTAAA15102TTCACTTTCACTCTCAGCCATTATTACGGCATCATCTGCATATCAAACTA
2_Tcm_b3v08.
OE257619.1:383-402
AAAAAGAAAATCATTTTCACTAGCTTTCTG383TTCACTTTCACTCTCAGCCAAATAATAATCATAACATTCCAAACTGTTGT
Selenia dentaria genome assembly, chromosome: 2.
OU862877.1:42481724-42481743
TACTCATCCGTCTCATCTTCAAATTAATAC42481724TTCACTTTCACTCTCAGCCAGCCGACGCTCAATTAAATCTAAGATTCCTT
Athripsodes cinereus genome assembly, chromosome: 8.
OX388312.1:28195602-28195621
ATTCATTTTCATCCCATTCATACTGCAACT28195602TTCACTTTCACTCTCAGCCATTAATTTTATGTATGTGAGTAATAATATGA
Cervus elaphus genome assembly, chromosome: 20.
OU343097.1:50506271-50506290
CTTCTTAATGGTCCAAGAGACTGCTGAGGT50506271TGGCTGAGAGTGAAAGTGAAGTCGCTCAGTCGTGTCCAACTCTTTGTGAC
Denticeps clupeoides genome assembly, chromosome: 1.
LR535813.1:1457138-1457157
TGAAGATAGTGATGATCTGTCCATCTTGTC1457138TGGCTGAGAGTGAAAGTGAAGTGATTGTCATTGTGAAACACTGCAGTACA
Mobula hypostoma genome assembly, chromosome: 3.
OY992594.1:99636838-99636857
TCAAGCATTCAGGCTTGGAGATGCCAGAAG99636838TGGCTGAGAGTGAAAGTGAAATGGTTTCTCTACTTCAGCAGTTTAGAAAC
TSA: Cannabis sativa PK08128.1_1.CasaPuKu mRNA sequence.
JP449761.1:804-823
AGAATGAAGAAAATGAGGATGATGATTGGA804TGGCTGAGAGTGAAAGTGAAGATGATAATGACATTGTCGTTTCTAATGTG
Arctium minus genome assembly, chromosome: 9.
OX941088.1:50045788-50045807
CTCAGAAGAAGAAGAAGAAGAAGGTGTTAG50045788TGGCTGAGAGTGAAAGTGAAGAAAGCTCAGAGGAGGAGATTGATATGGCT
2_Tsi_b3v08.
OC000980.1:106606-106625
ACAACAGTTTGGAATGTTATGATTATTATT106606TGGCTGAGAGTGAAAGTGAACAGAAAGCTAGTGAAAATGATTTTCTTTTT
1_Tps_b3v08.
OD106384.1:380-399
ATAACAGTTTGGAATGTTATGATTATTATT380TGGCTGAGAGTGAAAGTGAACAGAAAGCGAGAGAAAATGATTTTATTTTT
4_Tbi_b3v08.
OD606967.1:691-710
TTCTGCTTCATGCAGATGATGTCTTATTAA691TGGCTGAGAGTGAAAGTGAATAATTGCAGAATGCAATAAATTGTTTGAAT
4_Tte_b3v08.
OE000406.1:106738-106757
TGCTGCTATATGCAGATGATGCCATATTAA106738TGGCTGAGAGTGAAAGTGAAAGTGACTTGCAGAATGCATTAAATCGTTTG
4_Tte_b3v08.
OE001973.1:141391-141410
TCCTGCTTCATGCAGATGATGTCTTATTAA141391TGGCTGAGAGTGAAAGTGAATAATTGCAGAATGCAATAAATTGTTTGAAT
5_Tge_b3v08.
OE839211.1:104877-104896
TGCTGCTATATGCAGATGATGTCATATTAA104877TGGCTGAGAGTGAAAGTGAAAGTGACTTGCAGAATGCATTAAATCGTTGG
Oscheius sp. JU1382 genome assembly, chromosome: I.
OW051475.1:2705215-2705234
GAAGCGATCCTTGGTTATCGACTTTGTCCA2705215TGGCTGAGAGTGAAAGTGAAAAGGGCGGCTCTTTCTTTTGGCGCGTAAAA
Athripsodes cinereus genome assembly, chromosome: 21.
OX388325.1:16152696-16152715
CATTGATGTACGCAGATGATTTGGTGTTAA16152696TGGCTGAGAGTGAAAGTGAACTTACAAGAGATTGTTACGTGTGTGTATGA
Pyrrhosoma nymphula genome assembly, chromosome: 2.
OY754328.1:24279907-24279926
AGACTGGGATTTTTCAAAGGTAAGTCCTCG24279907TGGCTGAGAGTGAAAGTGAATTTTATTTTGCCTTATTCGGGGTCCTATCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCACTTTCACTCTCAGCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCACTTTCACTCTCAGCCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.151 | 0.142 | search_plus_done; http://172.18.8.135:50400/match?q=TTCACTTTCACTCTCAGCCA&k=0&no_gap=0&offset=0&limit=50
0.261 | 0.111 | search_minus_done; http://172.18.8.135:50400/match?q=TGGCTGAGAGTGAAAGTGAA&k=0&no_gap=0&offset=0&limit=42
0.270 | 0.009 | cgi_end;

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