GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 11:42:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Rana temporaria genome assembly, chromosome: 2.
LR991681.1:465516106-465516125
TTCAAGTAGAACTATAGACAAAACTTTTTT465516106TTCACTTTGGATAGAGCAGGGAAGGGTTATAACCCCTATTAGATTTTTGT
Trifolium repens mRNA, clone: WCC05b17_066, unspecified EST.
FY455747.1:369-388
ATCAAGAAATTTGAAGATGGTGAAACAGAG369TTCACTTTGGATAGAGCAGGACCATTTTATTTCATCAGTGGAAAAGATGA
Trifolium repens mRNA, clone: WCC22b19_002, unspecified EST.
FY461696.1:349-368
ATCAAGAAATTTGAAGATGGTGAAACAGAG349TTCACTTTGGATAGAGCAGGACCATTCTATTTCATCAGTGGAAAAGATGA
Trifolium repens mRNA, clone: WCC25k12_093, unspecified EST.
FY462973.1:241-260
ATCAAGAAATTTGAAGATGGTGAAACAGAG241TTCACTTTGGATAGAGCAGGGCCATTCTATTTCATCAGTGGAAAAGATGA
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:19766148-19766167
TCATCTTTTCCACTGATGAAATAAAATGGT19766148CCTGCTCTATCCAAAGTGAACTCTGTTTCACCATCTTCAAATTTCTTGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCACTTTGGATAGAGCAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCACTTTGGATAGAGCAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.368 | 0.359 | search_plus_done; http://172.18.8.135:50400/match?q=TTCACTTTGGATAGAGCAGG&k=0&no_gap=0&offset=0&limit=50
0.387 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=CCTGCTCTATCCAAAGTGAA&k=0&no_gap=0&offset=0&limit=46
0.388 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).